FFCP PHASE1:Hg19::chr11:121459639..121459651,+: Difference between revisions
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|id=chr11:121459639..121459651,+
|short_description=p@chr11:121459639..121459651,+
|description=CAGE_peak_at_chr11:121459639..121459651,+
|association_with_transcri...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr11:121459639..121459651,+ | |||
|description=CAGE_peak_at_chr11:121459639..121459651,+ | |||
|id=chr11:121459639..121459651,+ | |||
|ontology_enrichment_celltype=CL:0002057!3.99e-41!42;CL:0000860!4.95e-38!45;CL:0002009!3.09e-32!65;CL:0002194!1.55e-30!63;CL:0000576!1.55e-30!63;CL:0000040!1.55e-30!63;CL:0000559!1.55e-30!63;CL:0000557!4.70e-29!71;CL:0000763!1.22e-27!112;CL:0000049!1.22e-27!112;CL:0000839!5.81e-27!70;CL:0000766!9.24e-27!76;CL:0000037!2.05e-18!172;CL:0000566!2.05e-18!172;CL:0002032!5.39e-18!165;CL:0000837!5.39e-18!165;CL:0000988!5.32e-17!182;CL:0002031!8.97e-16!124;CL:0002087!3.57e-15!119;CL:0000738!1.32e-14!140 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.52e-64;33!CL:0002057;3.52e-64;33!CL:0000473;2.72e-43;39!CL:0000234;2.72e-43;39!CL:0000576;7.83e-31;48!CL:0000766;3.62e-15;69!CL:0000763;7.32e-14;100!CL:0000037;9.96e-11;1!CL:0001024;9.96e-11;1!CL:0002087;1.21e-09;104!CL:0000738;3.27e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,5.55e-55,42;CL:0002057,5.55e-55,42;CL:0000473,8.02e-48,48;CL:0000234,8.02e-48,48;CL:0002194,8.63e-38,59;CL:0000576,8.63e-38,59;CL:0000040,8.63e-38,59;CL:0000559,8.63e-38,59;CL:0002009,1.70e-36,61;CL:0000839,1.36e-33,66;CL:0000557,4.59e-33,67;CL:0000766,1.23e-30,72;CL:0000763,1.17e-28,108;CL:0000049,1.17e-28,108;CL:0000037,5.58e-22,168;CL:0002087,5.56e-21,115;CL:0000988,1.00e-20,177;CL:0002032,1.18e-20,161;CL:0000837,1.18e-20,161;CL:0002031,5.25e-20,120;CL:0000738,2.31e-17,136;CL:0001024,6.14e-11,1;CL:0000134,6.59e-09,354;CL:0002320,1.13e-08,361;CL:0000219,7.44e-08,386;CL:0000048,7.57e-07,427 | |||
|ontology_enrichment_development_v019=CL:0002057;1.31e-43;42!CL:0000049;2.05e-09;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.25e-27!80;UBERON:0001474!2.67e-25!86;UBERON:0002390!3.09e-22!102;UBERON:0003061!3.09e-22!102;UBERON:0004765!1.11e-20!101;UBERON:0001434!1.11e-20!101;UBERON:0002193!1.04e-19!112;UBERON:0002405!4.87e-19!115;UBERON:0001049!2.03e-10!57;UBERON:0005068!2.03e-10!57;UBERON:0006241!2.03e-10!57;UBERON:0007135!2.03e-10!57;UBERON:0002204!3.17e-10!167;UBERON:0002616!1.85e-08!59;UBERON:0001893!1.26e-07!34;UBERON:0002780!1.29e-07!41;UBERON:0001890!1.29e-07!41;UBERON:0006240!1.29e-07!41;UBERON:0003080!2.13e-07!42;UBERON:0003081!2.23e-07!216;UBERON:0000955!9.26e-07!69;UBERON:0006238!9.26e-07!69 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,7.13e-33,76;UBERON:0001474,2.58e-30,82;UBERON:0004765,1.99e-27,90;UBERON:0002405,1.80e-26,93;UBERON:0002390,5.26e-25,98;UBERON:0003061,5.26e-25,98;UBERON:0001434,1.85e-24,100;UBERON:0002193,1.78e-22,108;UBERON:0002204,1.18e-13,167;UBERON:0003081,9.15e-11,203;UBERON:0002384,2.34e-08,371 | |||
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| ||
|short_description=p@chr11:121459639..121459651,+ | |||
}} | }} |
Latest revision as of 19:13, 23 July 2015
Short description: | p@chr11:121459639..121459651, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:121459639..121459651, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 5.55e-55 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.55e-55 | 42 |
defensive cell | 8.02e-48 | 48 |
phagocyte | 8.02e-48 | 48 |
monopoietic cell | 8.63e-38 | 59 |
monocyte | 8.63e-38 | 59 |
monoblast | 8.63e-38 | 59 |
promonocyte | 8.63e-38 | 59 |
macrophage dendritic cell progenitor | 1.70e-36 | 61 |
myeloid lineage restricted progenitor cell | 1.36e-33 | 66 |
granulocyte monocyte progenitor cell | 4.59e-33 | 67 |
myeloid leukocyte | 1.23e-30 | 72 |
myeloid cell | 1.17e-28 | 108 |
common myeloid progenitor | 1.17e-28 | 108 |
hematopoietic stem cell | 5.58e-22 | 168 |
nongranular leukocyte | 5.56e-21 | 115 |
hematopoietic cell | 1.00e-20 | 177 |
hematopoietic oligopotent progenitor cell | 1.18e-20 | 161 |
hematopoietic multipotent progenitor cell | 1.18e-20 | 161 |
hematopoietic lineage restricted progenitor cell | 5.25e-20 | 120 |
leukocyte | 2.31e-17 | 136 |
CD34-positive, CD38-negative hematopoietic stem cell | 6.14e-11 | 1 |
mesenchymal cell | 6.59e-09 | 354 |
connective tissue cell | 1.13e-08 | 361 |
motile cell | 7.44e-08 | 386 |
multi fate stem cell | 7.57e-07 | 427 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 7.13e-33 | 76 |
bone element | 2.58e-30 | 82 |
skeletal element | 1.99e-27 | 90 |
immune system | 1.80e-26 | 93 |
hematopoietic system | 5.26e-25 | 98 |
blood island | 5.26e-25 | 98 |
skeletal system | 1.85e-24 | 100 |
hemolymphoid system | 1.78e-22 | 108 |
musculoskeletal system | 1.18e-13 | 167 |
lateral plate mesoderm | 9.15e-11 | 203 |
connective tissue | 2.34e-08 | 371 |