FFCP PHASE1:Hg19::chr13:76363081..76363091,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4008 | |EntrezGene=4008 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6646 | |HGNC=6646 | ||
|TSSclassifier=strong | |||
|UniProt=E9PLU6 | |UniProt=E9PLU6 | ||
|association_with_transcript=107bp_to_ENST00000497947_5end | |association_with_transcript=107bp_to_ENST00000497947_5end | ||
|cluster_id=chr13:76363081..76363091,+ | |||
|coexpression_cluster_id=C1190 | |||
|description=CAGE_peak_29_at_LMO7_5end | |description=CAGE_peak_29_at_LMO7_5end | ||
|id=chr13:76363081..76363091,+ | |id=chr13:76363081..76363091,+ | ||
|ontology_enrichment_celltype=CL:0000188!2.70e-15!9;CL:0000515!6.37e-08!4 | |ontology_enrichment_celltype=CL:0000188!2.70e-15!9;CL:0000515!6.37e-08!4 | ||
|ontology_enrichment_celltype_v019=CL:0000188;2.36e-26;9!CL:0000680;2.26e-15;7!CL:0002573;5.24e-10;2!CL:0000594;1.33e-09;3!CL:0000222;2.90e-08;1!CL:0000228;3.96e-08;1!CL:0002372;3.96e-08;1!CL:0000056;1.03e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000188,3.16e-26,9;CL:0002573,6.00e-10,2;CL:0000594,1.66e-09,3;CL:0000228,3.58e-08,1;CL:0002372,3.58e-08,1;CL:0000515,9.01e-08,4 | |||
|ontology_enrichment_development_v019=UBERON:0008947;5.66e-17;29!CL:0000515;1.03e-07;4 | |||
|ontology_enrichment_disease=DOID:305!2.45e-10!106;DOID:0050687!2.94e-08!143;DOID:14566!8.41e-07!239 | |ontology_enrichment_disease=DOID:305!2.45e-10!106;DOID:0050687!2.94e-08!143;DOID:14566!8.41e-07!239 | ||
|ontology_enrichment_disease_v019=DOID:3111;2.44e-08;1!DOID:3603;2.44e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3111,2.71e-08,1;DOID:3603,2.71e-08,1;DOID:305,4.42e-08,106;DOID:0050687,1.64e-07,143;DOID:14566,4.19e-07,239 | |||
|ontology_enrichment_uberon=UBERON:0001737!7.93e-17!9;UBERON:0001557!2.30e-08!19;UBERON:0000490!1.95e-07!138 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;1.17e-57;9!UBERON:0001557;1.17e-57;9!UBERON:0001134;6.91e-26;16!UBERON:0002036;6.91e-26;16!UBERON:0002385;2.30e-12;31!UBERON:0001015;2.30e-12;31!UBERON:0000383;2.30e-12;31!UBERON:0000072;2.57e-12;37!UBERON:0000065;2.23e-10;44 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,7.11e-58,9;UBERON:0001557,9.98e-27,19;UBERON:0008947,1.13e-12,38;UBERON:0003258,1.13e-12,38;UBERON:0000072,5.60e-10,47;UBERON:0000065,1.67e-08,54 | |||
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| ||
|short_description=p29@LMO7 | |short_description=p29@LMO7 | ||
}} | }} |
Latest revision as of 00:17, 18 September 2015
Short description: | p29@LMO7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_29_at_LMO7_5end |
Coexpression cluster: | C1190_Skeletal_rhabdomyosarcoma_mesenchymal_giant_mucinous_skeletal_Hep2 |
Association with transcript: | 107bp_to_ENST00000497947_5end |
EntrezGene: | LMO7 |
HGNC: | 6646 |
UniProt: | E9PLU6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cell of skeletal muscle | 3.16e-26 | 9 |
Schwann cell | 6.00e-10 | 2 |
skeletal muscle satellite cell | 1.66e-09 | 3 |
multinucleate cell | 3.58e-08 | 1 |
myotube | 3.58e-08 | 1 |
skeletal muscle myoblast | 9.01e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
larynx | 7.11e-58 | 9 |
upper respiratory tract | 9.98e-27 | 19 |
respiratory primordium | 1.13e-12 | 38 |
endoderm of foregut | 1.13e-12 | 38 |
segment of respiratory tract | 5.60e-10 | 47 |
respiratory tract | 1.67e-08 | 54 |
Ontology term | p-value | n |
---|---|---|
cystadenocarcinoma | 2.71e-08 | 1 |
mucinous cystadenocarcinoma | 2.71e-08 | 1 |
carcinoma | 4.42e-08 | 106 |
cell type cancer | 1.64e-07 | 143 |
disease of cellular proliferation | 4.19e-07 | 239 |