FFCP PHASE1:Hg19::chr19:24182477..24182494,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:24182477..24182494,- | |||
|coexpression_cluster_id=C1360 | |||
|description=CAGE_peak_at_chr19:24182477..24182494,- | |description=CAGE_peak_at_chr19:24182477..24182494,- | ||
|id=chr19:24182477..24182494,- | |id=chr19:24182477..24182494,- | ||
|ontology_enrichment_celltype=CL:0002057!1.24e-16!42;CL:0000763!1.53e-16!112;CL:0000049!1.53e-16!112;CL:0000557!1.97e-15!71;CL:0000766!4.67e-15!76;CL:0000839!9.92e-15!70;CL:0002009!1.66e-14!65;CL:0000860!3.55e-14!45;CL:0002194!1.47e-13!63;CL:0000576!1.47e-13!63;CL:0000040!1.47e-13!63;CL:0000559!1.47e-13!63 | |ontology_enrichment_celltype=CL:0002057!1.24e-16!42;CL:0000763!1.53e-16!112;CL:0000049!1.53e-16!112;CL:0000557!1.97e-15!71;CL:0000766!4.67e-15!76;CL:0000839!9.92e-15!70;CL:0002009!1.66e-14!65;CL:0000860!3.55e-14!45;CL:0002194!1.47e-13!63;CL:0000576!1.47e-13!63;CL:0000040!1.47e-13!63;CL:0000559!1.47e-13!63 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.25e-20;33!CL:0002057;1.25e-20;33!CL:0000473;6.26e-18;39!CL:0000234;6.26e-18;39!CL:0000576;1.46e-10;48!CL:0000766;1.71e-08;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,7.61e-20,48;CL:0000234,7.61e-20,48;CL:0000860,1.31e-18,42;CL:0002057,1.31e-18,42;CL:0000557,3.99e-17,67;CL:0000766,1.05e-16,72;CL:0000839,2.71e-16,66;CL:0002009,3.45e-16,61;CL:0000763,7.58e-16,108;CL:0000049,7.58e-16,108;CL:0002194,4.65e-15,59;CL:0000576,4.65e-15,59;CL:0000040,4.65e-15,59;CL:0000559,4.65e-15,59 | |||
|ontology_enrichment_development_v019=CL:0002057;1.09e-13;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!5.84e-13!80;UBERON:0001474!3.73e-12!86;UBERON:0004765!6.74e-10!101;UBERON:0001434!6.74e-10!101;UBERON:0002204!2.00e-09!167;UBERON:0003081!3.59e-09!216;UBERON:0002390!7.99e-09!102;UBERON:0003061!7.99e-09!102;UBERON:0002405!1.58e-08!115;UBERON:0002193!5.34e-08!112 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.76e-14,76;UBERON:0001474,2.03e-13,82;UBERON:0004765,1.75e-11,90;UBERON:0003081,2.31e-11,203;UBERON:0002405,7.64e-11,93;UBERON:0002204,5.57e-10,167;UBERON:0001434,8.47e-10,100;UBERON:0002390,1.35e-09,98;UBERON:0003061,1.35e-09,98;UBERON:0002193,1.34e-08,108 | |||
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| ||
|short_description=p@chr19:24182477..24182494,- | |short_description=p@chr19:24182477..24182494,- | ||
}} | }} |
Latest revision as of 05:52, 26 July 2015
Short description: | p@chr19:24182477..24182494, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:24182477..24182494, - |
Coexpression cluster: | C1360_skeletal_Monocytederived_Smooth_optic_Myoblast_acute_Mesenchymal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 7.61e-20 | 48 |
phagocyte | 7.61e-20 | 48 |
classical monocyte | 1.31e-18 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.31e-18 | 42 |
granulocyte monocyte progenitor cell | 3.99e-17 | 67 |
myeloid leukocyte | 1.05e-16 | 72 |
myeloid lineage restricted progenitor cell | 2.71e-16 | 66 |
macrophage dendritic cell progenitor | 3.45e-16 | 61 |
myeloid cell | 7.58e-16 | 108 |
common myeloid progenitor | 7.58e-16 | 108 |
monopoietic cell | 4.65e-15 | 59 |
monocyte | 4.65e-15 | 59 |
monoblast | 4.65e-15 | 59 |
promonocyte | 4.65e-15 | 59 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.76e-14 | 76 |
bone element | 2.03e-13 | 82 |
skeletal element | 1.75e-11 | 90 |
lateral plate mesoderm | 2.31e-11 | 203 |
immune system | 7.64e-11 | 93 |
musculoskeletal system | 5.57e-10 | 167 |
skeletal system | 8.47e-10 | 100 |
hematopoietic system | 1.35e-09 | 98 |
blood island | 1.35e-09 | 98 |
hemolymphoid system | 1.34e-08 | 108 |