FFCP PHASE1:Hg19::chr11:12107935..12107951,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr11:12107935..12107951,-
|short_description=p@chr11:12107935..12107951,-
|description=CAGE_peak_at_chr11:12107935..12107951,-
|association_with_transcript=NA
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr11:12107935..12107951,- | |||
|coexpression_cluster_id=C91 | |||
|description=CAGE_peak_at_chr11:12107935..12107951,- | |||
|id=chr11:12107935..12107951,- | |||
|ontology_enrichment_celltype=CL:0002371!1.25e-15!591;CL:0000144!4.38e-14!625;CL:0000548!4.31e-13!679;CL:0000004!4.31e-13!679;CL:0000255!4.31e-13!679;CL:0000220!7.17e-13!246;CL:0000012!1.13e-12!682;CL:0002321!1.73e-12!248;CL:0000055!3.73e-12!180;CL:0000057!8.79e-10!75;CL:0000359!3.10e-09!32;CL:0000192!5.81e-08!42;CL:0000514!5.81e-08!42;CL:0000183!9.76e-08!59;CL:0000680!9.81e-08!57;CL:0000056!9.81e-08!57;CL:0000355!9.81e-08!57;CL:0000003!1.24e-07!722;CL:0002620!1.89e-07!23;CL:0000187!2.10e-07!54;CL:0000222!4.32e-07!119 | |||
|ontology_enrichment_celltype_v019=CL:0000359;8.25e-18;32!CL:0000192;2.92e-11;43!CL:0000134;4.65e-11;55!CL:0000723;5.60e-11;61!CL:0000048;6.67e-10;58!CL:0000569;1.27e-08;4!CL:0002594;1.46e-07;4!CL:0000034;2.10e-07;69!CL:0002159;4.29e-07;14!CL:0002494;7.49e-07;16 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,8.34e-19,32;CL:0000192,5.44e-14,43;CL:0000514,5.44e-14,43;CL:0000187,7.63e-11,55;CL:0000680,5.41e-10,58;CL:0000056,5.41e-10,58;CL:0000355,5.41e-10,58;CL:0000393,3.13e-09,61;CL:0000211,3.13e-09,61;CL:0000569,1.08e-08,4;CL:0000011,1.08e-08,4;CL:0002594,1.58e-07,4;CL:0000723,5.59e-07,433;CL:0002494,6.05e-07,16;CL:0000048,7.12e-07,427;CL:0002159,8.50e-07,14 | |||
|ontology_enrichment_development_v019=CL:0000514;2.92e-11;43!CL:0000011;1.27e-08;4 | |||
|ontology_enrichment_disease=DOID:2394!7.73e-08!14;DOID:120!8.84e-07!27 | |||
|ontology_enrichment_disease_v019=DOID:2394;1.07e-12;14!DOID:120;2.84e-08;27!DOID:193;1.65e-07;29 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,7.67e-13,14;DOID:120,2.20e-08,27;DOID:193,1.31e-07,29 | |||
|ontology_enrichment_uberon=UBERON:0003914!8.65e-16!118;UBERON:0005256!3.96e-14!143;UBERON:0000055!9.02e-13!69;UBERON:0002049!1.68e-12!79;UBERON:0007798!1.68e-12!79;UBERON:0001637!2.06e-12!42;UBERON:0003509!2.06e-12!42;UBERON:0004572!2.06e-12!42;UBERON:0000914!5.20e-12!83;UBERON:0002329!5.20e-12!83;UBERON:0003077!5.20e-12!83;UBERON:0003059!5.20e-12!83;UBERON:0007282!5.20e-12!83;UBERON:0009618!5.20e-12!83;UBERON:0007285!5.20e-12!83;UBERON:0004872!1.09e-11!84;UBERON:0001981!2.08e-11!60;UBERON:0007500!2.08e-11!60;UBERON:0004537!2.08e-11!60;UBERON:0006965!2.08e-11!60;UBERON:0000486!1.14e-10!82;UBERON:0002100!1.46e-10!216;UBERON:0004573!2.90e-10!33;UBERON:0004571!2.90e-10!33;UBERON:0004535!7.91e-10!110;UBERON:0000119!3.50e-09!312;UBERON:0001009!4.39e-09!113;UBERON:0000483!1.18e-08!309;UBERON:0003104!1.31e-08!238;UBERON:0009142!1.31e-08!238;UBERON:0000475!1.79e-08!365;UBERON:0000490!1.98e-08!138;UBERON:0004290!2.01e-08!70;UBERON:0000467!1.01e-07!625;UBERON:0000480!1.29e-07!626;UBERON:0002385!2.15e-07!63;UBERON:0001015!2.15e-07!63;UBERON:0000383!2.15e-07!63;UBERON:0003102!2.30e-07!95;UBERON:0002097!2.30e-07!40;UBERON:0000468!3.06e-07!659;UBERON:0002199!3.71e-07!45;UBERON:0002416!3.71e-07!45;UBERON:0000481!5.13e-07!347;UBERON:0001134!6.12e-07!61;UBERON:0002036!6.12e-07!61;UBERON:0003082!6.12e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;1.25e-11;33!UBERON:0004571;1.25e-11;33!UBERON:0001637;9.61e-11;42!UBERON:0003509;9.61e-11;42!UBERON:0004572;9.61e-11;42!UBERON:0002119;3.42e-08;4!UBERON:0001708;7.91e-08;4!UBERON:0008895;7.91e-08;4!UBERON:0001310;1.46e-07;4!UBERON:0000992;6.39e-07;13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001637,6.39e-15,42;UBERON:0003509,6.39e-15,42;UBERON:0004572,6.39e-15,42;UBERON:0003914,2.01e-13,117;UBERON:0004573,3.90e-13,33;UBERON:0004571,3.90e-13,33;UBERON:0004872,6.42e-12,83;UBERON:0007500,3.30e-11,59;UBERON:0001981,3.30e-11,59;UBERON:0004537,3.30e-11,59;UBERON:0006965,3.30e-11,59;UBERON:0000055,6.16e-10,68;UBERON:0000486,1.93e-09,83;UBERON:0001134,5.39e-09,62;UBERON:0002036,5.39e-09,62;UBERON:0003082,5.39e-09,62;UBERON:0002385,1.52e-08,64;UBERON:0001015,1.52e-08,64;UBERON:0000383,1.52e-08,64;UBERON:0007524,1.71e-08,73;UBERON:0002119,2.00e-08,4;UBERON:0004535,4.74e-08,109;UBERON:0002329,5.38e-08,71;UBERON:0003059,5.38e-08,71;UBERON:0007282,5.38e-08,71;UBERON:0004290,5.38e-08,71;UBERON:0009618,5.38e-08,71;UBERON:0002049,6.70e-08,78;UBERON:0007798,6.70e-08,78;UBERON:0003077,8.27e-08,72;UBERON:0007285,8.27e-08,72;UBERON:0001708,9.43e-08,4;UBERON:0008895,9.43e-08,4;UBERON:0007503,1.11e-07,78;UBERON:0001009,1.21e-07,112;UBERON:0001310,1.58e-07,4;UBERON:0000992,4.88e-07,13 | |||
|phase1_expression=0.908391896352783,0.428201047781966,0.140954404095971,0,0,2.61701557230111,0,0,0,1.72013755551056,4.88460817580699,0.873765488520689,1.84636884759917,2.97039247104112,2.31978163009541,2.01697543935533,1.20538905604795,2.19093027116212,0.487932798790507,0.246242116153576,0.204000691244253,0,0,0.136874425072884,0.125542639594803,0,0,0,0,0,0,0.919421224478927,1.8072355126695,5.9160641626686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0,0,0,0.383587685530591,0.361439152384566,0.50133791063589,0,0,0,0.0945348171640679,0.886917589850256,0.790513071238134,0,1.09288586487763,0.370784442784429,0,0,0,0,0,0,0.596287222100115,0.860234595106124,0.347140501607594,0.56530794192401,0.419499436209906,0.275118041940067,0,0.258416759169329,0.35576626268671,0.33472061276467,0.402829317109147,0,0,0,0,0.267899184852239,0,0,0,0.949265659568129,0.366403487860815,0,0,0.436094052142534,0,0.25326102332916,28.2031555132156,2.0078563452417,0,0.560677600142307,8.5399196583764,1.97334038733728,0,0.134710672069688,0.163461903113459,0.908144565869588,0,0,0.624320153660641,0,0.448346041655403,0.352303495931295,0.485618833104395,0.421352420106746,0.204154171254893,0.245668634623536,0,0,0,1.82032272387605,0,0,0.125118519871964,0.554128230968366,1.75591048352335,0.612975591598039,0.150238058906597,0.907457465280168,6.63741652048789,0.640672166455702,0.211931901159562,4.80145753735044,0,13.6549486224183,0.37223371266318,2.53164498361899,0.584622030967192,7.32057945307932,0.368199594569197,0,9.58525899794859,0.705264687593482,0.339121184620975,0.386521706326594,0.818238361772504,1.43402297694502,0,0,0,0,0,0,0,0.643240938192885,1.38134921352481,1.39310378409594,1.44375896333917,0,0,0,0,0,0,0.134831308160164,0,0,0,2.80483547606892,0.4115740113314,1.47008711385542,0,0,0,0,0,0.514703430895577,0.878002283269004,0,0.201057944823262,1.75918045801206,0,0,0,0,0.821860859650752,0.577465791044295,0.462985512576611,0.380508304469197,0,0,0,0,0,2.81201501960331,1.00789276919316,2.1266264586358,0,0,0.766765358330422,0,0,0,0,0,0,0,0,0,0,0,0,0.336393253036082,0.43596006883328,0.2933531432838,0.387815147273333,0,2.535908257668,0,0,0,0,0,4.00338382242813,0,0.823240336780769,2.60588947434988,2.48774364119782,3.95975936466715,0.301439377059586,0,0.599837947092342,0,0,0,0.479249710983165,0,1.42636905040718,0.723906533337896,0,0.537182889719687,0,0,0,0,0,0,0,0,0,0,0,0,0.36807447515742,0,0,0.831883446123229,0.713715955188647,0.473107245101804,0,0,0,0,0.664225598535437,3.13427586520895,0.0868836144680828,0.587403472388222,0,0,0,0,0,0,0.30239029332968,0,2.30192959932094,0,0.640695746278505,0,4.18220194973379,4.45254199334973,0.925258162815933,2.30830242907065,1.47828880824856,0,0.464841513839837,0,0.802025881213139,0.0920809889358963,0,0.182091168006717,0.131124414959424,0.451199612907412,1.00119938235739,0.784349769176855,1.46139224653261,0.633309773357254,0,0.510281115829547,0.431831832204279,0,0.812839312631559,0,0.254876273045038,0.831076008928724,0.447749509444357,0,0,0,0.328014645699706,0.976135183992909,0.309123034943167,0.0915694648183434,0,1.14853107599234,1.30012049207304,0,0.193341436584244,0.308097234229289,0,0.964856007391714,0,0,0.0852266274161009,0,0.330569830721956,0,8.0396008871588,0,0,11.333244485903,1.3940745403212,0,1.59691809095107,0,3.33583594387056,6.5837447901316,0,0,0,0.255897791311334,0,1.27281299170375,6.27958912159384,0.179872457583315,0,0.117812402345686,1.41527737101321,3.17020642346017,0,0,0,4.22600587027022,0.136499911407986,0,0,0.551365343546124,1.99031692572366,1.75380354101505,0,1.31178950409327,1.82619339266434,1.239293992399,1.40847801266121,1.29070216983646,0.294747123039363,2.1400263088875,0,0,0,0,0,0.673554789078584,5.3624182042863,6.53345909167936,0.188287601553558,3.87454835404107,3.36942951335251,3.54744122829341,0.689170200620878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19372242368845,0.296964680832639,0.614321404198464,0,0,0.556543525114529,0,0,0.796991953004279,0,0,0,0,0.622079175323615,0,0.179021174675609,0,0,0,0,0,0,0,0,0,0,0,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0.10893846351899,6.97118721393016,0,0.341826167541004,0,0,0,3.50901275705111,0.183195186803725,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0.782658475728359,0,0,0,0,0.252746318513952,0,0,0,0,0,0,0,0,0.173559738335131,5.38958185779077,2.78589461057288,0.17472666824203,0.51595809741485,0,0,0,0.0969890164884194,0,0,0,0.596143835108969,0,0,0,0.426905989478705,0.19980960958213,0,0,0,0,1.11827282008889,0,0.271808412147228,0.209205692624666,0.305994652908965,0,0,0,0,0,0,0,0,0,0,0,0,0,1.80149941771202,0,0.0787831823072236,0.0824158583811665,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211200673038813,0,0,0,0,0,0,0.864221491201268,0,0,0,0.681552087141687,0,0,0,0,0,0,0,0.213574825135389,0,0.414239055347196,0,0,0,1.27668251554036,0,0.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| ||
|short_description=p@chr11:12107935..12107951,- | |||
}} | }} |
Latest revision as of 19:10, 23 July 2015
Short description: | p@chr11:12107935..12107951, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:12107935..12107951, - |
Coexpression cluster: | C91_Fibroblast_Smooth_mesenchymal_Mesothelial_Small_Preadipocyte_Hair |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 8.34e-19 | 32 |
smooth muscle cell | 5.44e-14 | 43 |
smooth muscle myoblast | 5.44e-14 | 43 |
muscle cell | 7.63e-11 | 55 |
muscle precursor cell | 5.41e-10 | 58 |
myoblast | 5.41e-10 | 58 |
multi-potent skeletal muscle stem cell | 5.41e-10 | 58 |
electrically responsive cell | 3.13e-09 | 61 |
electrically active cell | 3.13e-09 | 61 |
cardiac mesenchymal cell | 1.08e-08 | 4 |
migratory trunk neural crest cell | 1.08e-08 | 4 |
smooth muscle cell of the umbilical artery | 1.58e-07 | 4 |
somatic stem cell | 5.59e-07 | 433 |
cardiocyte | 6.05e-07 | 16 |
multi fate stem cell | 7.12e-07 | 427 |
general ecto-epithelial cell | 8.50e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 7.67e-13 | 14 |
female reproductive organ cancer | 2.20e-08 | 27 |
reproductive organ cancer | 1.31e-07 | 29 |