FFCP PHASE1:Hg19::chr19:16830652..16830663,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=284434 | |EntrezGene=284434 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=27619 | |HGNC=27619 | ||
|TSSclassifier=strong | |||
|UniProt=C9J2Y8,E5RJJ1,Q149M9 | |UniProt=C9J2Y8,E5RJJ1,Q149M9 | ||
|association_with_transcript=-123bp_to_ENST00000420818,ENST00000518676,NM_001007525,uc002net.3,uc002neu.3_5end | |association_with_transcript=-123bp_to_ENST00000420818,ENST00000518676,NM_001007525,uc002net.3,uc002neu.3_5end | ||
|cluster_id=chr19:16830652..16830663,+ | |||
|coexpression_cluster_id=C160 | |||
|description=CAGE_peak_3_at_NWD1_5end | |description=CAGE_peak_3_at_NWD1_5end | ||
|id=chr19:16830652..16830663,+ | |id=chr19:16830652..16830663,+ | ||
|ontology_enrichment_celltype=CL:0002327!1.91e-07!4 | |ontology_enrichment_celltype=CL:0002327!1.91e-07!4 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0007297;2.49e-20;2!UBERON:0003056;1.02e-13;3!UBERON:0005754;6.13e-11;1!UBERON:0005425;1.33e-10;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!6.08e-56!115;UBERON:0001049!4.27e-36!57;UBERON:0005068!4.27e-36!57;UBERON:0006241!4.27e-36!57;UBERON:0007135!4.27e-36!57;UBERON:0001017!9.46e-32!82;UBERON:0005743!1.54e-31!86;UBERON:0000955!1.52e-30!69;UBERON:0006238!1.52e-30!69;UBERON:0002616!1.87e-30!59;UBERON:0002346!4.60e-30!90;UBERON:0003075!5.65e-29!86;UBERON:0007284!5.65e-29!86;UBERON:0000073!5.81e-29!94;UBERON:0001016!5.81e-29!94;UBERON:0002780!1.49e-27!41;UBERON:0001890!1.49e-27!41;UBERON:0006240!1.49e-27!41;UBERON:0003080!1.06e-26!42;UBERON:0000153!9.09e-26!129;UBERON:0007811!9.09e-26!129;UBERON:0000033!6.64e-24!123;UBERON:0000924!8.01e-24!173;UBERON:0006601!8.01e-24!173;UBERON:0004121!9.82e-23!169;UBERON:0001893!2.19e-22!34;UBERON:0002020!2.79e-22!34;UBERON:0003528!2.79e-22!34;UBERON:0001869!1.17e-21!32;UBERON:0002791!3.19e-21!33;UBERON:0003056!2.86e-20!61;UBERON:0002619!8.62e-20!22;UBERON:0000956!6.38e-17!25;UBERON:0000203!6.38e-17!25;UBERON:0001950!1.51e-16!20;UBERON:0000477!4.95e-12!286;UBERON:0004111!6.34e-12!241;UBERON:0000475!8.61e-12!365;UBERON:0000062!2.55e-11!511;UBERON:0000349!2.04e-10!5;UBERON:0003076!2.26e-10!15;UBERON:0003057!2.26e-10!15;UBERON:0000922!2.53e-10!612;UBERON:0000483!1.02e-09!309;UBERON:0002050!1.72e-09!605;UBERON:0005423!1.72e-09!605;UBERON:0000119!1.83e-09!312;UBERON:0000923!5.37e-09!604;UBERON:0005291!5.37e-09!604;UBERON:0006598!5.37e-09!604;UBERON:0002532!5.37e-09!604;UBERON:0000481!7.22e-09!347;UBERON:0000025!9.79e-09!194;UBERON:0002298!2.02e-08!8;UBERON:0000468!2.96e-08!659;UBERON:0004732!3.05e-08!13;UBERON:0001871!6.15e-08!7;UBERON:0001896!1.87e-07!3;UBERON:0005290!1.87e-07!3;UBERON:0010096!1.87e-07!3;UBERON:0001911!1.91e-07!4;UBERON:0005333!1.91e-07!4;UBERON:0008425!1.91e-07!4;UBERON:0005311!1.91e-07!4;UBERON:0000467!1.92e-07!625;UBERON:0000480!2.17e-07!626;UBERON:0002420!3.83e-07!9;UBERON:0007245!3.83e-07!9;UBERON:0010009!3.83e-07!9;UBERON:0010011!3.83e-07!9;UBERON:0000454!3.83e-07!9;UBERON:0000200!5.77e-07!6;UBERON:0004733!7.59e-07!12;UBERON:0002028!7.59e-07!12;UBERON:0007277!7.59e-07!12;UBERON:0006947!7.87e-07!3;UBERON:0004054!7.87e-07!3;UBERON:0002308!8.32e-07!9;UBERON:0000125!8.32e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001896;5.59e-30;3!UBERON:0005290;5.59e-30;3!UBERON:0005162;4.90e-20;2!UBERON:0000122;4.90e-20;2!UBERON:0001954;8.71e-20;2!UBERON:0003022;8.71e-20;2!UBERON:0002421;8.71e-20;2!UBERON:0002600;8.71e-20;2!UBERON:0002298;2.58e-15;6!UBERON:0006947;6.95e-14;3!UBERON:0004054;6.95e-14;3!UBERON:0004732;3.92e-12;13!UBERON:0002336;3.40e-11;1!UBERON:0011215;3.40e-11;1!UBERON:0001018;3.40e-11;1!UBERON:0002473;3.40e-11;1!UBERON:0005340;3.40e-11;1!UBERON:0003544;3.40e-11;1!UBERON:0005970;3.40e-11;1!UBERON:0002316;3.40e-11;1!UBERON:0001020;3.40e-11;1!UBERON:0002437;3.40e-11;1!UBERON:0001301;3.76e-11;1!UBERON:0000998;6.13e-11;1!UBERON:0006868;6.13e-11;1!UBERON:0005904;1.21e-10;4!UBERON:0000996;1.33e-10;1!UBERON:0000941;1.33e-10;1!UBERON:0001785;1.33e-10;1!UBERON:0002464;1.33e-10;1!UBERON:0004904;1.33e-10;1!UBERON:0001021;1.33e-10;1!UBERON:0000349;1.79e-08;5!UBERON:0007023;5.96e-08;114!UBERON:0004733;6.48e-08;12!UBERON:0002028;6.48e-08;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001896,3.78e-30,3;UBERON:0005290,3.78e-30,3;UBERON:0010096,3.78e-30,3;UBERON:0007023,1.64e-21,114;UBERON:0005162,4.45e-20,2;UBERON:0000122,4.45e-20,2;UBERON:0001954,6.54e-20,2;UBERON:0003022,6.54e-20,2;UBERON:0002421,6.54e-20,2;UBERON:0002600,6.54e-20,2;UBERON:0002298,2.13e-15,6;UBERON:0006947,9.00e-14,3;UBERON:0004054,9.00e-14,3;UBERON:0004732,3.40e-12,13;UBERON:0002336,3.41e-11,1;UBERON:0011215,3.41e-11,1;UBERON:0001018,3.41e-11,1;UBERON:0002473,3.41e-11,1;UBERON:0005340,3.41e-11,1;UBERON:0003544,3.41e-11,1;UBERON:0005970,3.41e-11,1;UBERON:0002316,3.41e-11,1;UBERON:0001020,3.41e-11,1;UBERON:0002437,3.41e-11,1;UBERON:0001301,3.76e-11,1;UBERON:0000998,9.05e-11,1;UBERON:0006868,9.05e-11,1;UBERON:0000941,1.21e-10,1;UBERON:0001785,1.21e-10,1;UBERON:0002464,1.21e-10,1;UBERON:0004904,1.21e-10,1;UBERON:0001021,1.21e-10,1;UBERON:0003902,1.21e-10,1;UBERON:0005425,1.21e-10,1;UBERON:0000996,1.46e-10,1;UBERON:0005904,1.47e-10,4;UBERON:0001016,6.36e-09,89;UBERON:0000349,1.60e-08,5;UBERON:0003075,3.87e-08,82;UBERON:0007284,3.87e-08,82;UBERON:0001017,3.94e-08,81;UBERON:0000073,5.03e-08,53;UBERON:0002616,5.03e-08,53;UBERON:0004733,5.90e-08,12;UBERON:0002028,5.90e-08,12;UBERON:0007277,5.90e-08,12;UBERON:0000955,8.69e-08,68;UBERON:0006238,8.69e-08,68;UBERON:0002346,1.05e-07,86;UBERON:0001049,1.46e-07,56;UBERON:0005068,1.46e-07,56;UBERON:0006241,1.46e-07,56;UBERON:0007135,1.46e-07,56;UBERON:0000966,2.61e-07,6;UBERON:0005388,2.61e-07,6;UBERON:0001802,2.61e-07,6;UBERON:0011216,5.66e-07,223 | |||
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|short_description=p3@NWD1 | |short_description=p3@NWD1 | ||
}} | }} |
Latest revision as of 10:34, 16 September 2015
Short description: | p3@NWD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_NWD1_5end |
Coexpression cluster: | C160_medulla_Hepatocyte_retina_corpus_liver_pineal_cerebral |
Association with transcript: | -123bp_to_ENST00000420818, ENST00000518676, NM_001007525, uc002net.3, uc002neu.3_5end |
EntrezGene: | NWD1 |
HGNC: | 27619 |
UniProt: | C9J2Y8E5RJJ1Q149M9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data