FFCP PHASE1:Hg19::chr13:45048432..45048452,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8848 | |EntrezGene=8848 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16826 | |HGNC=16826 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_NM_001243798_5end | |association_with_transcript=0bp_to_NM_001243798_5end | ||
|cluster_id=chr13:45048432..45048452,- | |||
|coexpression_cluster_id=C39 | |||
|description=CAGE_peak_29_at_TSC22D1_5end | |description=CAGE_peak_29_at_TSC22D1_5end | ||
|id=chr13:45048432..45048452,- | |id=chr13:45048432..45048452,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002541;1.40e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,1.51e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0010226;5.13e-23;1!UBERON:0007297;1.48e-12;2!UBERON:0009117;6.78e-10;10!UBERON:0005564;6.78e-10;10 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:114;2.32e-12;2!DOID:1287;8.14e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:114,2.32e-12,2;DOID:1287,8.14e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0007023!4.90e-29!115;UBERON:0002780!1.12e-08!41;UBERON:0001890!1.12e-08!41;UBERON:0006240!1.12e-08!41;UBERON:0002346!2.00e-08!90;UBERON:0003080!2.19e-08!42;UBERON:0003075!2.72e-08!86;UBERON:0007284!2.72e-08!86;UBERON:0001893!3.01e-08!34;UBERON:0001049!4.22e-08!57;UBERON:0005068!4.22e-08!57;UBERON:0006241!4.22e-08!57;UBERON:0007135!4.22e-08!57;UBERON:0004151!7.43e-08!3;UBERON:0003978!1.56e-07!3;UBERON:0009751!1.56e-07!3;UBERON:0000946!1.56e-07!3;UBERON:0002523!1.56e-07!3;UBERON:0005983!1.56e-07!3;UBERON:0002165!1.56e-07!3;UBERON:0002062!1.56e-07!3;UBERON:0007280!1.56e-07!3;UBERON:0002791!2.00e-07!33;UBERON:0001950!5.80e-07!20 | |||
|ontology_enrichment_uberon_v019=UBERON:0001301;1.07e-23;1!UBERON:0002084;5.13e-23;1!UBERON:0002082;5.13e-23;1!UBERON:0003135;6.40e-19;11!UBERON:0000473;3.95e-12;8!UBERON:0003101;8.34e-10;22!UBERON:0000079;8.34e-10;22!UBERON:0005631;9.24e-10;10!UBERON:0000158;9.24e-10;10!UBERON:0006947;8.31e-09;3!UBERON:0004054;8.31e-09;3!UBERON:0004151;1.40e-08;3!UBERON:0003124;1.40e-08;3!UBERON:0000920;1.40e-08;3!UBERON:0005904;6.50e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001301,1.07e-23,1;UBERON:0002084,5.13e-23,1;UBERON:0002082,5.13e-23,1;UBERON:0010226,5.13e-23,1;UBERON:0003135,6.40e-19,11;UBERON:0000473,3.95e-12,8;UBERON:0003101,8.34e-10,22;UBERON:0000079,8.34e-10,22;UBERON:0006947,8.31e-09,3;UBERON:0004054,8.31e-09,3;UBERON:0004151,1.40e-08,3;UBERON:0000920,1.51e-08,3;UBERON:0005631,3.24e-07,14;UBERON:0000158,3.24e-07,14;UBERON:0005904,6.50e-07,4 | |||
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| ||
|short_description=p29@TSC22D1 | |short_description=p29@TSC22D1 | ||
}} | }} |
Latest revision as of 11:27, 17 September 2015
Short description: | p29@TSC22D1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_29_at_TSC22D1_5end |
Coexpression cluster: | C39_epididymis_ductus_seminal_testis_acute_thyroid_CD133 |
Association with transcript: | 0bp_to_NM_001243798_5end |
EntrezGene: | TSC22D1 |
HGNC: | 16826 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 1.51e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
epididymis | 1.07e-23 | 1 |
heart left ventricle | 5.13e-23 | 1 |
cardiac ventricle | 5.13e-23 | 1 |
future cardiac ventricle | 5.13e-23 | 1 |
male reproductive organ | 6.40e-19 | 11 |
testis | 3.95e-12 | 8 |
male organism | 8.34e-10 | 22 |
male reproductive system | 8.34e-10 | 22 |
male genital duct | 8.31e-09 | 3 |
internal male genitalia | 8.31e-09 | 3 |
cardiac chamber | 1.40e-08 | 3 |
egg chorion | 1.51e-08 | 3 |
extraembryonic membrane | 3.24e-07 | 14 |
membranous layer | 3.24e-07 | 14 |
duct of male reproductive system | 6.50e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
heart disease | 2.32e-12 | 2 |
cardiovascular system disease | 8.14e-07 | 4 |