FFCP PHASE1:Hg19::chr13:37006080..37006097,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8900 | |EntrezGene=8900 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1577 | |HGNC=1577 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=40bp_to_ENST00000463403_5end | |association_with_transcript=40bp_to_ENST00000463403_5end | ||
|cluster_id=chr13:37006080..37006097,+ | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_4_at_CCNA1_5end | |description=CAGE_peak_4_at_CCNA1_5end | ||
|id=chr13:37006080..37006097,+ | |id=chr13:37006080..37006097,+ | ||
|ontology_enrichment_celltype=CL:0002557!7.72e-21!1;CL:0002545!2.47e-11!2;CL:0002605!5.93e-08!3 | |ontology_enrichment_celltype=CL:0002557!7.72e-21!1;CL:0002545!2.47e-11!2;CL:0002605!5.93e-08!3 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0009117;2.08e-27;10!UBERON:0005564;2.08e-27;10 | |||
|ontology_enrichment_disease=DOID:225!9.43e-21!1;DOID:74!4.52e-11!2 | |ontology_enrichment_disease=DOID:225!9.43e-21!1;DOID:74!4.52e-11!2 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005800!2.47e-11!2;UBERON:0001515!2.47e-11!2;UBERON:0007497!4.09e-11!2;UBERON:0003643!4.09e-11!2;UBERON:0003504!4.09e-11!2;UBERON:0003469!4.09e-11!2;UBERON:0003496!4.09e-11!2;UBERON:0004797!4.09e-11!2;UBERON:0002012!4.09e-11!2;UBERON:0008886!4.09e-11!2;UBERON:0007303!4.09e-11!2;UBERON:0002061!4.09e-11!2;UBERON:0005432!4.09e-11!2;UBERON:0004363!4.09e-11!2;UBERON:0000473!4.43e-11!8;UBERON:0003135!2.62e-08!11;UBERON:0010188!7.76e-08!3;UBERON:0002539!7.76e-08!3;UBERON:0004145!7.76e-08!3;UBERON:0008816!7.76e-08!3 | |ontology_enrichment_uberon=UBERON:0005800!2.47e-11!2;UBERON:0001515!2.47e-11!2;UBERON:0007497!4.09e-11!2;UBERON:0003643!4.09e-11!2;UBERON:0003504!4.09e-11!2;UBERON:0003469!4.09e-11!2;UBERON:0003496!4.09e-11!2;UBERON:0004797!4.09e-11!2;UBERON:0002012!4.09e-11!2;UBERON:0008886!4.09e-11!2;UBERON:0007303!4.09e-11!2;UBERON:0002061!4.09e-11!2;UBERON:0005432!4.09e-11!2;UBERON:0004363!4.09e-11!2;UBERON:0000473!4.43e-11!8;UBERON:0003135!2.62e-08!11;UBERON:0010188!7.76e-08!3;UBERON:0002539!7.76e-08!3;UBERON:0004145!7.76e-08!3;UBERON:0008816!7.76e-08!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0000473;6.50e-34;8!UBERON:0003135;4.86e-25;11!UBERON:0000991;1.02e-13;21!UBERON:0003101;3.77e-13;22!UBERON:0000079;3.77e-13;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,6.50e-34,8;UBERON:0003135,4.86e-25,11;UBERON:0000991,1.02e-13,21;UBERON:0009196,1.02e-13,21;UBERON:0009117,1.02e-13,21;UBERON:0005564,1.02e-13,21;UBERON:0004176,3.77e-13,22;UBERON:0003101,3.77e-13,22;UBERON:0000079,3.77e-13,22;UBERON:0002323,7.30e-07,46 | |||
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|short_description=p4@CCNA1 | |short_description=p4@CCNA1 | ||
}} | }} |
Latest revision as of 06:01, 17 September 2015
Short description: | p4@CCNA1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_CCNA1_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 40bp_to_ENST00000463403_5end |
EntrezGene: | CCNA1 |
HGNC: | 1577 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
testis | 6.50e-34 | 8 |
male reproductive organ | 4.86e-25 | 11 |
gonad | 1.02e-13 | 21 |
indifferent external genitalia | 1.02e-13 | 21 |
indifferent gonad | 1.02e-13 | 21 |
gonad primordium | 1.02e-13 | 21 |
external genitalia | 3.77e-13 | 22 |
male organism | 3.77e-13 | 22 |
male reproductive system | 3.77e-13 | 22 |
body cavity | 7.30e-07 | 46 |