FFCP PHASE1:Hg19::chr18:7946941..7946946,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5797 | |EntrezGene=5797 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9675 | |HGNC=9675 | ||
|TSSclassifier=strong | |||
|UniProt=E7EVX9 | |UniProt=E7EVX9 | ||
|association_with_transcript=-5bp_to_ENST00000444013_5end | |association_with_transcript=-5bp_to_ENST00000444013_5end | ||
|cluster_id=chr18:7946941..7946946,+ | |||
|description=CAGE_peak_16_at_PTPRM_5end | |description=CAGE_peak_16_at_PTPRM_5end | ||
|id=chr18:7946941..7946946,+ | |id=chr18:7946941..7946946,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000746;6.76e-18;3!CL:0000737;8.81e-14;4!CL:0000244;1.13e-13;4!CL:0000731;1.13e-13;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000746,6.76e-18,3;CL:0000513,6.76e-18,3;CL:0000737,8.82e-14,4;CL:0000244,1.13e-13,4;CL:0000731,1.13e-13,4 | |||
|ontology_enrichment_development_v019=CL:0000513;6.76e-18;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!4.18e-07!123;UBERON:0000153!7.35e-07!129;UBERON:0007811!7.35e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0002394;1.13e-13;4!UBERON:0003928;1.13e-13;4!UBERON:0000365;3.26e-11;5!UBERON:0005910;1.44e-09;6!UBERON:0002294;2.18e-08;7!UBERON:0001173;2.18e-08;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000365,3.26e-11,5;UBERON:0005910,1.44e-09,6;UBERON:0002394,1.57e-09,6;UBERON:0003928,1.57e-09,6;UBERON:0002294,8.85e-07,9;UBERON:0001173,8.85e-07,9;UBERON:0004912,8.85e-07,9 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.37129905888014,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0,0.267540828089713,0,0,0,0,0,0.318565414324097,0,0,0,0,0,0,0,0,0,0.144824403882799,2.43806866313962,0,0.12786256184353,0,0,0,0,0,0.0945348171640679,0,0.087834785693126,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0.264818361626438,0,0,0.560677600142307,0,0,0.311211035399766,0.538842688278752,0,0.151357427644931,0,0,0,0,0,0,0,0.140450806702248,0,0,0.413303124703062,0,0,0,0,0.336672227908132,0.125118519871964,0,0,0,0.150238058906597,0.113432183160021,0,0,0,0,0.206105058476878,0,0,0.168776332241266,0.0974370051611986,0.252433774244115,0,0,0,0,0,0.193260853163297,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368965315629341,0,0.329250856225877,0,0,0.277765335475589,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299918973546171,0,0,0,0,0,0,0.144781306667579,0.205476322550383,0.358121926479791,0,0,0,0.128343036279748,0,0,0,0.167516265334349,0,0,0,0,0.24538298343828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164254312027618,0,0,0,0,0,0.114814448164607,0,0,0.451199612907412,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0,0.15350367472613,0,0.429680979473094,0,0.0852266274161009,0.0890320356467374,0.330569830721956,0,1.91419068741876,0,0,0,0,0,0,0,0,0.286249773483982,0,0,0.190630193923825,0,0.855877976067841,0,0,0.179872457583315,0,0,0.202182481573316,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422215270595328,0,0,0.349934720244983,0.0962221127255121,0,0,0,0,1.68471475667626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0.111443384277478,0,0.71623345421307,0.296964680832639,0.307160702099232,0.994147647766298,0.140669416410513,0,0.16480387422676,0,0,0,0,0,0,0,0.179736702294654,1.07412704805365,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0.508507300585533,0,0,0,0,0,0,0,0,0,0,0.21787692703798,0,0,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296521128680622,0.123563938946503,0.104421949505455,0,0,0,0,0.391329237864179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.391969589657511,0,0,0,0,0,0.0821154570532092,0,0,0,0,0,0.126621591911757,0.195551382734803,0,0,0,0,0,0,0,0.124252535565433,0.235694034616795,0,0,0.101998217636322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0984274815147488,0,0,0.136203406111576,0,0,0,0,0,0.425246896606173,0,0,0,0.105600336519406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0.171086837884329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18628920882415,0,0,0.151649117541648,0,0,0,0,0,0,0,0,0,0,0,0.151230923763239,0,0.147855149989634,0.159296767163702,0,0,0,0,0,0,0,0,0.181848659202559,0.107410557042488,0,0.398095888698616,0,0,0.336749488765919,0,0,0,0,0.226705925512272,0.231522474323834,0,0.358177682162975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211312123358627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0,0.192687675289379,0,0,0.205116364240755,0.252071696221718,0.0691572524642179,0.322951291263702,0,0,0,0,0.115525666150338,0,0,0,0,0,0,0,0,0,0.202612753855184,0,0,0.19024743058172,0,0,0,0,0,0.535701835878287,0,0.606965604236632,0,0,0,0,0.203909198930495,0.0657727735628491,0,0.111231401892069,0,0.314231179832004,0,0,0,0.47775168788705,0,0,0,0,0,0.207216164163037,0.3414369541879,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22589216407792,0,0.452888530700021,0,0,0,0,0.471353094203252,0.196308467114945,0,0,0,0,0,0,0,0,0.240724100067505,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0.101988829741982,0,0,0,0,0,0,0,0,0,0.0645889098360061,0,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0.0898252021065869,0,0.122241444182866,0,0,0.201273793591026,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.37129905888014,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0,0.267540828089713,0,0,0,0,0,0.318565414324097,0,0,0,0,0,0,0,0,0,0.144824403882799,2.43806866313962,0,0.12786256184353,0,0,0,0,0,0.0945348171640679,0,0.087834785693126,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0.264818361626438,0,0,0.560677600142307,0,0,0.311211035399766,0.538842688278752,0,0.151357427644931,0,0,0,0,0,0,0,0.140450806702248,0,0,0.413303124703062,0,0,0,0,0.336672227908132,0.125118519871964,0,0,0,0.150238058906597,0.113432183160021,0,0,0,0,0.206105058476878,0,0,0.168776332241266,0.0974370051611986,0.252433774244115,0,0,0,0,0,0.193260853163297,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368965315629341,0,0.329250856225877,0,0,0.277765335475589,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299918973546171,0,0,0,0,0,0,0.144781306667579,0.205476322550383,0.358121926479791,0,0,0,0.128343036279748,0,0,0,0.167516265334349,0,0,0,0,0.24538298343828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164254312027618,0,0,0,0,0,0.114814448164607,0,0,0.451199612907412,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0,0.15350367472613,0,0.429680979473094,0,0.0852266274161009,0.0890320356467374,0.330569830721956,0,1.91419068741876,0,0,0,0,0,0,0,0,0.286249773483982,0,0,0.190630193923825,0,0.855877976067841,0,0,0.179872457583315,0,0,0.202182481573316,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422215270595328,0,0,0.349934720244983,0.0962221127255121,0,0,0,0,1.68471475667626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0.111443384277478,0,0.71623345421307,0.296964680832639,0.307160702099232,0.994147647766298,0.140669416410513,0,0.16480387422676,0,0,0,0,0,0,0,0.179736702294654,1.07412704805365,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0.508507300585533,0,0,0,0,0,0,0,0,0,0,0.21787692703798,0,0,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296521128680622,0.123563938946503,0.104421949505455,0,0,0,0,0.391329237864179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.391969589657511,0,0,0,0,0,0.0821154570532092,0,0,0,0,0,0.126621591911757,0.195551382734803,0,0,0,0,0,0,0,0.124252535565433,0.235694034616795,0,0,0.101998217636322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0984274815147488,0,0,0.136203406111576,0,0,0,0,0,0.425246896606173,0,0,0,0.105600336519406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0.171086837884329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18628920882415,0,0,0.151649117541648,0,0,0,0,0,0,0,0,0,0,0,0.151230923763239,0,0.147855149989634,0.159296767163702,0,0,0,0,0,0,0,0,0.181848659202559,0.107410557042488,0,0.398095888698616,0,0,0.336749488765919,0,0,0,0,0.226705925512272,0.231522474323834,0,0.358177682162975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211312123358627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0,0.192687675289379,0,0,0.205116364240755,0.252071696221718,0.0691572524642179,0.322951291263702,0,0,0,0,0.115525666150338,0,0,0,0,0,0,0,0,0,0.202612753855184,0,0,0.19024743058172,0,0,0,0,0,0.535701835878287,0,0.606965604236632,0,0,0,0,0.203909198930495,0.0657727735628491,0,0.111231401892069,0,0.314231179832004,0,0,0,0.47775168788705,0,0,0,0,0,0.207216164163037,0.3414369541879,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22589216407792,0,0.452888530700021,0,0,0,0,0.471353094203252,0.196308467114945,0,0,0,0,0,0,0,0,0.240724100067505,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0.101988829741982,0,0,0,0,0,0,0,0,0,0.0645889098360061,0,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0.0898252021065869,0,0.122241444182866,0,0,0.201273793591026,0 | ||
|short_description=p16@PTPRM | |short_description=p16@PTPRM | ||
}} | }} |
Latest revision as of 20:18, 24 September 2015
Short description: | p16@PTPRM |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_16_at_PTPRM_5end |
Coexpression cluster: | NA |
Association with transcript: | -5bp_to_ENST00000444013_5end |
EntrezGene: | PTPRM |
HGNC: | 9675 |
UniProt: | E7EVX9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiac muscle cell | 6.76e-18 | 3 |
cardiac muscle myoblast | 6.76e-18 | 3 |
striated muscle cell | 8.82e-14 | 4 |
transitional epithelial cell | 1.13e-13 | 4 |
urothelial cell | 1.13e-13 | 4 |
Ontology term | p-value | n |
---|---|---|
urothelium | 3.26e-11 | 5 |
transitional epithelium | 1.44e-09 | 6 |
bile duct | 1.57e-09 | 6 |
digestive system duct | 1.57e-09 | 6 |
biliary system | 8.85e-07 | 9 |
biliary tree | 8.85e-07 | 9 |
biliary bud | 8.85e-07 | 9 |