FFCP PHASE1:Hg19::chr13:21347454..21347482,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr13:21347454..21347482,+ | |||
|coexpression_cluster_id=C23 | |||
|description=CAGE_peak_at_chr13:21347454..21347482,+ | |description=CAGE_peak_at_chr13:21347454..21347482,+ | ||
|id=chr13:21347454..21347482,+ | |id=chr13:21347454..21347482,+ | ||
|ontology_enrichment_celltype=CL:0000838!2.17e-16!52;CL:0000542!2.69e-16!53;CL:0000051!2.69e-16!53;CL:0000988!2.16e-12!182;CL:0000037!5.65e-11!172;CL:0000566!5.65e-11!172;CL:0000084!1.22e-10!25;CL:0000827!1.22e-10!25;CL:0002032!1.15e-08!165;CL:0000837!1.15e-08!165;CL:0000791!7.64e-08!18;CL:0000789!7.64e-08!18;CL:0002420!7.64e-08!18;CL:0002419!7.64e-08!18;CL:0000790!7.64e-08!18 | |ontology_enrichment_celltype=CL:0000838!2.17e-16!52;CL:0000542!2.69e-16!53;CL:0000051!2.69e-16!53;CL:0000988!2.16e-12!182;CL:0000037!5.65e-11!172;CL:0000566!5.65e-11!172;CL:0000084!1.22e-10!25;CL:0000827!1.22e-10!25;CL:0002032!1.15e-08!165;CL:0000837!1.15e-08!165;CL:0000791!7.64e-08!18;CL:0000789!7.64e-08!18;CL:0002420!7.64e-08!18;CL:0002419!7.64e-08!18;CL:0000790!7.64e-08!18 | ||
|ontology_enrichment_celltype_v019=CL:0000084;1.52e-20;25!CL:0000624;4.01e-15;6!CL:0000791;3.11e-14;18!CL:0000789;3.11e-14;18!CL:0002419;3.11e-14;18!CL:0000542;2.58e-11;53!CL:0000898;1.02e-08;3!CL:0000623;2.80e-08;3!CL:0000226;3.59e-08;3!CL:0000842;3.59e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000084,8.97e-21,25;CL:0000827,8.97e-21,25;CL:0000838,2.81e-16,52;CL:0000542,7.50e-16,53;CL:0000051,7.50e-16,53;CL:0000988,1.38e-15,177;CL:0000624,3.99e-15,6;CL:0000791,3.14e-14,18;CL:0000789,3.14e-14,18;CL:0002420,3.14e-14,18;CL:0002419,3.14e-14,18;CL:0000790,3.14e-14,18;CL:0000037,3.63e-13,168;CL:0000738,4.03e-10,136;CL:0002032,3.95e-09,161;CL:0000837,3.95e-09,161;CL:0002087,4.81e-09,115;CL:0000898,1.03e-08,3;CL:0000623,2.83e-08,3;CL:0000825,2.83e-08,3;CL:0000226,3.42e-08,3;CL:0000842,3.42e-08,3 | |||
|ontology_enrichment_development_v019=CL:0000790;3.11e-14;18!CL:0000051;2.58e-11;53 | |||
|ontology_enrichment_disease=DOID:2531!7.88e-12!51;DOID:0060083!7.88e-12!51;DOID:1240!1.40e-08!39 | |ontology_enrichment_disease=DOID:2531!7.88e-12!51;DOID:0060083!7.88e-12!51;DOID:1240!1.40e-08!39 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002331;7.85e-08;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002331,1.12e-07,10;UBERON:0000358,1.12e-07,10;UBERON:0000307,1.12e-07,10;UBERON:0000091,1.12e-07,10;UBERON:0000087,1.12e-07,10;UBERON:0007010,1.12e-07,10;UBERON:0007806,1.12e-07,10;UBERON:0008780,1.12e-07,10;UBERON:0005728,1.12e-07,10 | |||
|phase1_expression=0.181678379270557,0.428201047781966,0.422863212287913,0,0,0.872338524100369,0,0,0.522371256399677,0,0,0,0,0.123766352960047,0,0,0.602694528023977,0.730310090387373,0.975865597581014,0.492484232307152,0,0.313454721478088,0,0.136874425072884,0,0.993374274723366,0.821005894499457,0.629686250509434,1.18009283054671,1.53531759238885,0.154816123316076,0,0,0,2.16908161624845,0.568676929949686,1.46800219667424,0,1.40381113229099,1.51907609501096,0,0,0,0,0,0,0.232429036905685,0,0,0,0.512321413058201,0,0,0,0,0.188242339542605,0.272906150057846,0,0,0.320929027076094,0,0,0,0,0,0.56738522469114,0,0,0,0,0,0,0,0,0,0.419317291016752,0.112328631146495,0.150176892841506,0.32145117339416,0.285012743741249,0.59675003159727,0,0,0.546138611262131,0.889509253863555,0.426730222566507,0.400395987036012,1.72425731986345,0,0,1.70763890732835,0.587237189370939,0.382273228125229,0,0.560508562981536,0.526768169550154,6.09800287352883,5.50215067848831,5.75684197198626,1.5046784585161,36.8292161295957,32.6678985956966,21.4309401248702,2.1167986808183,15.0249012812167,11.7412964129319,8.6657236404805,1.40900451698243,1.04047478047903,1.97325485524411,1.93445012450094,2.02862160014537,30.5470320113844,14.4472047168445,13.589618094647,2.15287751125376,18.3945836928922,11.6833331464094,7.08455137654608,0.318565414324097,1.30216690771284,0.950452044448374,1.35517607169996,0.255973222308837,0,0.710331756132051,0,10.0803371612366,10.4301676355568,5.93780055919476,2.43806866313962,0.670700859703636,0,0,0,0.144846518960824,0,0.486634870302636,0,0,0.43917392846563,0.196468613246569,0,0,0,0,0,1.66943437013739,0.571994910780128,1.11437250398869,0,0,0.694281003215189,0,1.25849830862972,0,0,0,0,0.33472061276467,2.41697590265488,0,1.22031028774085,0.735326160691737,0.81014194788176,0.714397826272638,0.22452937262617,0.112611480483322,0,0,0.549605231791222,1.31780417436063,0,0,0,0.12663051166458,0.264818361626438,0.573673241497627,0,0.560677600142307,0,0.24666754841716,0.311211035399766,0.404132016209064,0,0.605429710579726,0.576175924479999,0,0,0,0,0.117434498643765,0,0,0,0,0,0,0.247266929278557,0,0.718618141816238,0,0,0,0,0,0.150238058906597,0,1.07633781413317,0.427114777637135,0,0.300091096084402,0,0.515281080091258,0,0.843881661206331,0.194874010322397,1.00973509697646,0.460249493211497,0,0,0.302256294682921,0,0,0,0,0,0.132529768321485,0,0,0,0,0,0,0,1.85747171212792,0,0.118306800039844,0,0.241011029883482,0,0,0.474541238222193,0.134831308160164,0.196221465125346,0,0.738155454624648,1.40241773803446,0,0,0,0,0,5.29755719297581,0,0,0.219500570817251,0,0,0.0925884451585296,0,0,0,0.115930404975077,0.587043471179108,0.288732895522148,0.462985512576611,0.190254152234598,0.790204397959275,0,0,0,0,0,0.16798212819886,0,0.0895585227028483,0,0.383382679165211,0,0,0.621984346622316,0.144119953416961,0.37872730027914,0.126995788584338,0,0,0,0.102827492703324,0,0,0,0,0.1466765716419,0,0,0,0.26593811658487,1.04007436911366,0.514414748524284,0,0.266422179016099,0.714889968290738,1.08524321078289,0,0,0,0,0,0,0,0,0,0,0,1.14861935834114,0,0.289562613335158,0,0.179060963239896,0.336255431980582,10.2455995305002,6.03757209606648,6.54549485026717,0.254094624222463,0,0,0.502548796003046,0,0.749007023947182,0,0.828831026872071,0,1.00034104211935,0,0,0.178428988797162,0.157702415033935,0.234282829985426,0.300946099727719,0,0,0.664225598535437,0.368738337083406,0.0868836144680828,0.195801157462741,0.343143423810856,4.54889657470352,7.76571122947021,7.4709290462411,0.303127571446259,0,0,0.744323423456331,0.920771839728375,0,0,0,0,0,0.154209693802656,0,0.657017248110473,0.519254429183621,0.116210378459959,0,0.802025881213139,0.0920809889358963,0,0.728364672026868,0.524497659837696,0,0.0770153371044148,0,0,0,0,0.170093705276516,0.647747748306418,0,0,0.501689773854853,0.254876273045038,0,0.223874754722178,1.09629938322967,0,0,0,0,0.206082023295445,0.27470839445503,0.165018999841176,0,0,1.6068392984416,0.193341436584244,0.616194468458578,0.15350367472613,0.137836572484531,0,0,0.170453254832202,0.623224249527161,0.165284915360978,0.192190067365106,0.638063562472921,0.2023155617111,0.464845549297286,1.25924938732256,0,0.308033580176089,0,0,0,0.143124886741991,0,0.632758849437452,0,0.255897791311334,0,0,0.78494864019923,0.359744915166629,0.274537029736055,0.235624804691373,0,0,0.421258456238981,0.48763373908959,0.243713489631284,0,0.136499911407986,0.141405431953713,0,0,1.32687795048244,0.876901770507525,0,0,0,0.30982349809975,0.563391205064483,0.286822704408103,0,0,0,0.211107635297664,0.329294892959902,0,0,0,0,0,0.0941438007767792,0,0,0,0.229723400206959,0,0,0.569647187174163,0.238231775457789,0,0,0,0,0.106824071127473,0,0,0.185803175125719,0.577076851905779,1.92082977040718,0.318852545457645,2.3949524571938,1.34053759092657,0.846694330895531,0.649243880549111,3.65036331547496,0.912938716132769,0.783399478865116,0,0.50787533340481,0.481764225311099,0.80719882876419,0.425846237690326,1.37402137902306,0.614481528616916,0.671028323677248,1.00109485027145,0.39077619080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| ||
|short_description=p@chr13:21347454..21347482,+ | |short_description=p@chr13:21347454..21347482,+ | ||
}} | }} |
Latest revision as of 15:01, 24 July 2015
Short description: | p@chr13:21347454..21347482, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:21347454..21347482, + |
Coexpression cluster: | C23_CD4_CD8_Natural_Peripheral_Basophils_CD19_CD14 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
T cell | 8.97e-21 | 25 |
pro-T cell | 8.97e-21 | 25 |
lymphoid lineage restricted progenitor cell | 2.81e-16 | 52 |
lymphocyte | 7.50e-16 | 53 |
common lymphoid progenitor | 7.50e-16 | 53 |
hematopoietic cell | 1.38e-15 | 177 |
CD4-positive, alpha-beta T cell | 3.99e-15 | 6 |
mature alpha-beta T cell | 3.14e-14 | 18 |
alpha-beta T cell | 3.14e-14 | 18 |
immature T cell | 3.14e-14 | 18 |
mature T cell | 3.14e-14 | 18 |
immature alpha-beta T cell | 3.14e-14 | 18 |
hematopoietic stem cell | 3.63e-13 | 168 |
leukocyte | 4.03e-10 | 136 |
hematopoietic oligopotent progenitor cell | 3.95e-09 | 161 |
hematopoietic multipotent progenitor cell | 3.95e-09 | 161 |
nongranular leukocyte | 4.81e-09 | 115 |
naive T cell | 1.03e-08 | 3 |
natural killer cell | 2.83e-08 | 3 |
pro-NK cell | 2.83e-08 | 3 |
single nucleate cell | 3.42e-08 | 3 |
mononuclear cell | 3.42e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
umbilical cord | 1.12e-07 | 10 |
blastocyst | 1.12e-07 | 10 |
blastula | 1.12e-07 | 10 |
bilaminar disc | 1.12e-07 | 10 |
inner cell mass | 1.12e-07 | 10 |
cleaving embryo | 1.12e-07 | 10 |
connecting stalk | 1.12e-07 | 10 |
inner cell mass derived epiblast | 1.12e-07 | 10 |
extraembryonic mesoderm | 1.12e-07 | 10 |