FFCP PHASE1:Hg19::chr11:115158193..115158232,-: Difference between revisions
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|id=chr11:115158193..115158232,-
|short_description=p15@CADM1
|description=CAGE_peak_15_at_CADM1_5end
|association_with_transcript=0bp_to_ENST00000543540_5end
|Ent...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=23705 | |EntrezGene=23705 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5951 | |HGNC=5951 | ||
|TSSclassifier=strong | |||
|UniProt=F5H0H5 | |UniProt=F5H0H5 | ||
|association_with_transcript=0bp_to_ENST00000543540_5end | |||
|cluster_id=chr11:115158193..115158232,- | |||
|coexpression_cluster_id=C94 | |||
|description=CAGE_peak_15_at_CADM1_5end | |||
|id=chr11:115158193..115158232,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000167;2.42e-50;1!CL:0000164;2.42e-50;1!CL:0000502;2.42e-50;1!CL:0000172;2.42e-50;1!CL:0000173;2.42e-50;1!CL:0002553;3.99e-50;1!CL:0000150;7.91e-07;9!CL:0000163;7.91e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000167,2.42e-50,1;CL:0000164,2.42e-50,1;CL:0000502,2.42e-50,1;CL:0000172,2.42e-50,1;CL:0000173,2.42e-50,1;CL:0002351,2.42e-50,1;CL:0002553,3.99e-50,1;CL:0000150,7.91e-07,9;CL:0000163,7.91e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002351;2.42e-50;1!UBERON:0007123;3.60e-11;5 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4430;2.42e-50;1!DOID:169;1.32e-09;6 | |||
|ontology_enrichment_disease_v019_2=DOID:4430,2.42e-50,1;DOID:169,1.32e-09,6 | |||
|ontology_enrichment_uberon=UBERON:0001869!1.21e-53!32;UBERON:0001893!2.70e-50!34;UBERON:0002791!6.15e-47!33;UBERON:0002780!1.84e-45!41;UBERON:0001890!1.84e-45!41;UBERON:0006240!1.84e-45!41;UBERON:0002020!1.84e-45!34;UBERON:0003528!1.84e-45!34;UBERON:0003080!2.77e-44!42;UBERON:0000956!1.44e-39!25;UBERON:0000203!1.44e-39!25;UBERON:0002616!1.79e-36!59;UBERON:0001049!1.45e-34!57;UBERON:0005068!1.45e-34!57;UBERON:0006241!1.45e-34!57;UBERON:0007135!1.45e-34!57;UBERON:0002619!1.81e-34!22;UBERON:0000955!8.96e-33!69;UBERON:0006238!8.96e-33!69;UBERON:0003056!4.05e-29!61;UBERON:0001950!1.42e-27!20;UBERON:0001017!8.49e-27!82;UBERON:0005743!2.58e-25!86;UBERON:0007023!7.63e-24!115;UBERON:0003075!1.71e-23!86;UBERON:0007284!1.71e-23!86;UBERON:0000073!1.99e-22!94;UBERON:0001016!1.99e-22!94;UBERON:0002346!3.25e-22!90;UBERON:0000153!5.80e-20!129;UBERON:0007811!5.80e-20!129;UBERON:0000033!2.05e-19!123;UBERON:0000349!1.77e-14!5;UBERON:0004121!1.83e-12!169;UBERON:0002420!4.45e-12!9;UBERON:0007245!4.45e-12!9;UBERON:0010009!4.45e-12!9;UBERON:0010011!4.45e-12!9;UBERON:0000454!4.45e-12!9;UBERON:0000924!4.82e-12!173;UBERON:0006601!4.82e-12!173;UBERON:0000200!9.81e-12!6;UBERON:0000025!2.13e-10!194;UBERON:0009663!2.67e-10!7;UBERON:0000369!2.90e-10!4;UBERON:0002435!2.90e-10!4;UBERON:0000204!2.90e-10!4;UBERON:0010082!2.90e-10!4;UBERON:0001954!3.68e-10!2;UBERON:0003022!3.68e-10!2;UBERON:0002421!3.68e-10!2;UBERON:0002600!3.68e-10!2;UBERON:0000477!1.14e-09!286;UBERON:0004111!6.72e-09!241;UBERON:0001871!7.10e-09!7;UBERON:0002046!7.27e-09!5;UBERON:0004117!7.27e-09!5;UBERON:0007689!7.27e-09!5;UBERON:0007123!7.27e-09!5;UBERON:0003091!7.27e-09!5;UBERON:0002021!1.14e-08!5;UBERON:0001872!1.31e-08!5;UBERON:0000064!1.48e-08!219;UBERON:0002308!4.98e-08!9;UBERON:0000125!4.98e-08!9;UBERON:0000483!1.15e-07!309;UBERON:0000119!1.58e-07!312;UBERON:0002771!8.07e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0002046;3.60e-11;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002046,3.60e-11,5;UBERON:0004117,3.60e-11,5;UBERON:0007689,3.60e-11,5;UBERON:0007123,3.60e-11,5;UBERON:0003091,3.60e-11,5 | |||
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| ||
|short_description=p15@CADM1 | |||
}} | }} |
Latest revision as of 17:32, 15 September 2015
Short description: | p15@CADM1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_15_at_CADM1_5end |
Coexpression cluster: | C94_smallcell_adrenal_lung_nonsmall_small_somatostatinoma_teratocarcinoma |
Association with transcript: | 0bp_to_ENST00000543540_5end |
EntrezGene: | CADM1 |
HGNC: | 5951 |
UniProt: | F5H0H5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
peptide hormone secreting cell | 2.42e-50 | 1 |
enteroendocrine cell | 2.42e-50 | 1 |
type D enteroendocrine cell | 2.42e-50 | 1 |
somatostatin secreting cell | 2.42e-50 | 1 |
pancreatic D cell | 2.42e-50 | 1 |
progenitor cell of endocrine pancreas | 2.42e-50 | 1 |
lung fibroblast | 3.99e-50 | 1 |
glandular epithelial cell | 7.91e-07 | 9 |
endocrine cell | 7.91e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
thyroid gland | 3.60e-11 | 5 |
pharyngeal pouch | 3.60e-11 | 5 |
thyroid diverticulum | 3.60e-11 | 5 |
pharyngeal pouch 2 | 3.60e-11 | 5 |
thyroid primordium | 3.60e-11 | 5 |
Ontology term | p-value | n |
---|---|---|
somatostatinoma | 2.42e-50 | 1 |
neuroendocrine tumor | 1.32e-09 | 6 |