FFCP PHASE1:Hg19::chr13:113344483..113344540,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23250 | |EntrezGene=23250 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13552 | |HGNC=13552 | ||
|TSSclassifier=strong | |||
|UniProt=P98196,E9PEJ6,Q659C3,Q6PJ25 | |UniProt=P98196,E9PEJ6,Q659C3,Q6PJ25 | ||
|association_with_transcript=-102bp_to_ENST00000283558,ENST00000375630,ENST00000375645,ENST00000487903,NM_015205,NM_032189,uc001vsi.3,uc001vsj.3_5end | |association_with_transcript=-102bp_to_ENST00000283558,ENST00000375630,ENST00000375645,ENST00000487903,NM_015205,NM_032189,uc001vsi.3,uc001vsj.3_5end | ||
|cluster_id=chr13:113344483..113344540,+ | |||
|description=CAGE_peak_1_at_ATP11A_5end | |description=CAGE_peak_1_at_ATP11A_5end | ||
|id=chr13:113344483..113344540,+ | |id=chr13:113344483..113344540,+ | ||
|ontology_enrichment_celltype=CL:0000766!2.12e-14!76;CL:0002194!4.42e-12!63;CL:0000576!4.42e-12!63;CL:0000040!4.42e-12!63;CL:0000559!4.42e-12!63;CL:0002057!1.07e-11!42;CL:0002009!2.12e-11!65;CL:0000557!6.05e-11!71;CL:0000860!1.49e-10!45;CL:0000839!8.66e-10!70;CL:0000763!2.95e-08!112;CL:0000049!2.95e-08!112 | |ontology_enrichment_celltype=CL:0000766!2.12e-14!76;CL:0002194!4.42e-12!63;CL:0000576!4.42e-12!63;CL:0000040!4.42e-12!63;CL:0000559!4.42e-12!63;CL:0002057!1.07e-11!42;CL:0002009!2.12e-11!65;CL:0000557!6.05e-11!71;CL:0000860!1.49e-10!45;CL:0000839!8.66e-10!70;CL:0000763!2.95e-08!112;CL:0000049!2.95e-08!112 | ||
|ontology_enrichment_celltype_v019=CL:0000473;1.94e-08;39!CL:0000234;1.94e-08;39!CL:0000576;7.72e-08;48!CL:0000860;2.08e-07;33!CL:0002057;2.08e-07;33!CL:0000766;3.10e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,3.32e-15,72;CL:0000473,5.68e-14,48;CL:0000234,5.68e-14,48;CL:0002194,6.77e-13,59;CL:0000576,6.77e-13,59;CL:0000040,6.77e-13,59;CL:0000559,6.77e-13,59;CL:0002009,3.82e-12,61;CL:0000860,1.07e-11,42;CL:0002057,1.07e-11,42;CL:0000557,1.34e-11,67;CL:0000839,2.22e-10,66;CL:0000763,1.40e-08,108;CL:0000049,1.40e-08,108 | |||
|ontology_enrichment_development_v019=CL:0002057;1.65e-08;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000480!1.73e-18!626;UBERON:0000062!1.89e-18!511;UBERON:0000467!4.17e-18!625;UBERON:0000468!1.64e-14!659;UBERON:0000922!1.58e-13!612;UBERON:0002050!2.61e-13!605;UBERON:0005423!2.61e-13!605;UBERON:0000923!3.65e-13!604;UBERON:0005291!3.65e-13!604;UBERON:0006598!3.65e-13!604;UBERON:0002532!3.65e-13!604;UBERON:0007023!9.50e-12!115;UBERON:0004111!4.08e-11!241;UBERON:0002405!2.29e-10!115;UBERON:0000025!3.47e-09!194;UBERON:0003081!6.86e-09!216;UBERON:0000466!1.87e-08!126;UBERON:0000926!5.48e-08!448;UBERON:0004120!5.48e-08!448;UBERON:0006603!5.48e-08!448;UBERON:0002371!1.35e-07!80;UBERON:0001474!1.82e-07!86;UBERON:0002193!1.89e-07!112;UBERON:0002390!3.40e-07!102;UBERON:0003061!3.40e-07!102;UBERON:0009497!4.52e-07!25;UBERON:0000015!4.52e-07!25;UBERON:0002423!4.52e-07!25;UBERON:0006235!4.52e-07!25;UBERON:0004161!4.52e-07!25;UBERON:0005172!5.01e-07!55;UBERON:0005173!5.01e-07!55;UBERON:0005177!5.98e-07!107 | |||
|ontology_enrichment_uberon_v019=UBERON:0002423;4.53e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000922,1.47e-13,592;UBERON:0005423,5.70e-13,581;UBERON:0007023,9.87e-12,114;UBERON:0004111,9.32e-11,240;UBERON:0002050,1.40e-10,564;UBERON:0000923,6.84e-10,560;UBERON:0010316,6.84e-10,560;UBERON:0005291,6.84e-10,560;UBERON:0006598,6.84e-10,560;UBERON:0010317,6.84e-10,560;UBERON:0002532,6.84e-10,560;UBERON:0000025,5.56e-09,192;UBERON:0002371,5.52e-08,76;UBERON:0001474,8.03e-08,82;UBERON:0002193,1.00e-07,108;UBERON:0002405,1.20e-07,93;UBERON:0003081,1.33e-07,203;UBERON:0005177,1.62e-07,101;UBERON:0002390,1.74e-07,98;UBERON:0003061,1.74e-07,98;UBERON:0009497,4.52e-07,25;UBERON:0000015,4.52e-07,25;UBERON:0002423,4.52e-07,25;UBERON:0006235,4.52e-07,25;UBERON:0004161,4.52e-07,25;UBERON:0005172,5.16e-07,54;UBERON:0005173,5.16e-07,54 | |||
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| ||
|short_description=p1@ATP11A | |short_description=p1@ATP11A | ||
}} | }} |
Latest revision as of 14:48, 16 September 2015
Short description: | p1@ATP11A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ATP11A_5end |
Coexpression cluster: | NA |
Association with transcript: | -102bp_to_ENST00000283558, ENST00000375630, ENST00000375645, ENST00000487903, NM_015205, NM_032189, uc001vsi.3, uc001vsj.3_5end |
EntrezGene: | ATP11A |
HGNC: | 13552 |
UniProt: | P98196E9PEJ6Q659C3Q6PJ25 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 3.32e-15 | 72 |
defensive cell | 5.68e-14 | 48 |
phagocyte | 5.68e-14 | 48 |
monopoietic cell | 6.77e-13 | 59 |
monocyte | 6.77e-13 | 59 |
monoblast | 6.77e-13 | 59 |
promonocyte | 6.77e-13 | 59 |
macrophage dendritic cell progenitor | 3.82e-12 | 61 |
classical monocyte | 1.07e-11 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.07e-11 | 42 |
granulocyte monocyte progenitor cell | 1.34e-11 | 67 |
myeloid lineage restricted progenitor cell | 2.22e-10 | 66 |
myeloid cell | 1.40e-08 | 108 |
common myeloid progenitor | 1.40e-08 | 108 |
Ontology term | p-value | n |
---|---|---|
embryo | 1.47e-13 | 592 |
developing anatomical structure | 5.70e-13 | 581 |
adult organism | 9.87e-12 | 114 |
anatomical conduit | 9.32e-11 | 240 |
embryonic structure | 1.40e-10 | 564 |
germ layer | 6.84e-10 | 560 |
germ layer / neural crest | 6.84e-10 | 560 |
embryonic tissue | 6.84e-10 | 560 |
presumptive structure | 6.84e-10 | 560 |
germ layer / neural crest derived structure | 6.84e-10 | 560 |
epiblast (generic) | 6.84e-10 | 560 |
tube | 5.56e-09 | 192 |
bone marrow | 5.52e-08 | 76 |
bone element | 8.03e-08 | 82 |
hemolymphoid system | 1.00e-07 | 108 |
immune system | 1.20e-07 | 93 |
lateral plate mesoderm | 1.33e-07 | 203 |
trunk region element | 1.62e-07 | 101 |
hematopoietic system | 1.74e-07 | 98 |
blood island | 1.74e-07 | 98 |
epithelium of foregut-midgut junction | 4.52e-07 | 25 |
anatomical boundary | 4.52e-07 | 25 |
hepatobiliary system | 4.52e-07 | 25 |
foregut-midgut junction | 4.52e-07 | 25 |
septum transversum | 4.52e-07 | 25 |
abdomen element | 5.16e-07 | 54 |
abdominal segment element | 5.16e-07 | 54 |