FFCP PHASE1:Hg19::chr18:65085254..65085257,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr18:65085254..65085257,- | |||
|description=CAGE_peak_at_chr18:65085254..65085257,- | |description=CAGE_peak_at_chr18:65085254..65085257,- | ||
|id=chr18:65085254..65085257,- | |id=chr18:65085254..65085257,- | ||
|ontology_enrichment_celltype=CL:0000055!1.22e-10!180;CL:0000057!6.10e-10!75;CL:0002620!3.11e-09!23;CL:0002552!3.94e-07!5 | |ontology_enrichment_celltype=CL:0000055!1.22e-10!180;CL:0000057!6.10e-10!75;CL:0002620!3.11e-09!23;CL:0002552!3.94e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0002539;1.26e-07;10!CL:0000346;8.38e-07;3!CL:1000428;8.38e-07;3!CL:0000515;8.38e-07;3!CL:0002592;8.38e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002539,1.09e-07,10;CL:0002592,6.88e-07,3;CL:0000346,7.28e-07,3;CL:1000428,7.28e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:17!1.11e-07!5;DOID:450!1.11e-07!5;DOID:66!1.11e-07!5;DOID:423!1.11e-07!5;DOID:0080000!1.11e-07!5;DOID:11722!1.11e-07!5 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!3.62e-09!83;UBERON:0002329!3.62e-09!83;UBERON:0003077!3.62e-09!83;UBERON:0003059!3.62e-09!83;UBERON:0007282!3.62e-09!83;UBERON:0009618!3.62e-09!83;UBERON:0007285!3.62e-09!83;UBERON:0003102!2.25e-07!95;UBERON:0004290!4.58e-07!70 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;7.84e-08;33!UBERON:0004571;7.84e-08;33!UBERON:0000947;9.73e-08;21!UBERON:0010191;9.73e-08;21!UBERON:0004237;1.26e-07;10!UBERON:0004695;1.26e-07;10!UBERON:0002111;1.26e-07;10!UBERON:0004178;1.26e-07;10!UBERON:0003498;8.38e-07;3!UBERON:0005985;8.38e-07;3!UBERON:0000412;8.38e-07;3!UBERON:0001621;8.38e-07;3!UBERON:0001992;8.38e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004573,2.12e-08,33;UBERON:0004571,2.12e-08,33;UBERON:0000947,9.51e-08,21;UBERON:0010191,9.51e-08,21;UBERON:0004237,1.09e-07,10;UBERON:0004695,1.09e-07,10;UBERON:0002111,1.09e-07,10;UBERON:0004178,1.09e-07,10;UBERON:0001621,6.88e-07,3;UBERON:0000412,7.28e-07,3;UBERON:0001992,7.28e-07,3 | |||
|phase1_expression=0.181678379270557,0,0,0,0.446961094427288,0,0,0,0,0,0,0,0,0,0.331397375727916,0,0,0,0,0,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306083892370903,0.320929027076094,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.473447805734733,0,0,0,0.221533894583621,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0.318565414324097,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0.283604451492204,0.221729397462564,0.175669571386252,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05927344650575,0.573673241497627,0,0.560677600142307,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0.161872944368132,0.140450806702248,0.204154171254893,0.122834317311768,0.103325781175765,1.18800285728205,0.741800787835671,0,0,0.673344455816265,0.375355559615893,0,0,0.30648779579902,0.150238058906597,0,1.07633781413317,0.213557388818567,0.423863802319124,0.600182192168805,0.103052529238439,0.257640540045629,0.37223371266318,0,0.194874010322397,0,0.368199594569197,0.161646056818812,1.42003837006646,0.302256294682921,0,0,0,0,0,0,0,0,0,0.72995471815166,1.56449532329816,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,1.02738161275192,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.356857977594324,0.157702415033935,0.234282829985426,0,0,0,0,0,0.347534457872331,0,0,0,0,0,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0,0,0.519254429183621,0,0,0,0,0,0.182091168006717,0.262248829918848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308097234229289,0.15350367472613,0.413509717453592,0.429680979473094,0.580066775656914,0.0852266274161009,0,0,0,0,0,0.464845549297286,1.88887408098384,2.0911118104818,0,0,0,0,0.143124886741991,0,0,0.38126038784765,0,0,0,0,0.179872457583315,0,0.235624804691373,0,1.58510321173008,0,0,0,0,0.272999822815972,0.141405431953713,0,0,0,0,0,0,0.202910376962704,0,0,0.143411352204052,0,0,0,0,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228234679033192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0.333926115068718,0,0.211125408127993,0.19924798825107,0,0,0,0,0,0,0,0.511572370226872,0,0,0,0,0,0,0,0,0,0,0,0,0.344743373241465,0,0,0,0,0,0,0,0,0,0,0,0,0.23056390438806,0,0.108647371922008,0,0.183195186803725,0,0,0,0.332423363800313,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0.296521128680622,0,0,0.067401132980677,0.802577647298789,0.234264445725339,0,0,0,0,0,0.30607276163049,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0967563312890851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101998217636322,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,1.16495949527454,0,0,0,0,0,0,0.136203406111576,0.321506296930038,0.137539436597234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0.197611631897944,0,0,1.08803560673895,0.2506898940227,0,0,0,0,0,0,0,0.110929051536852,0.0620964029413835,0,0.124980407962107,0,0,0,0,0,0,0,0,0.378806010550178,0.251567901752575,0.889811221596536,0,0,0.15543720058278,0.147855149989634,0.477890301491107,0,0.155262956876259,0,0.265841714557995,0.521745061811734,0,0.380805212168795,0,0,0,0,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0.179088841081487,0,0,0.176689145945881,0,0,0,0,0,0,0,0.132864840313363,0,0,0,0,0.19998739585493,0,0,0,0,0,0,0,0,0,0,0,3.82634856183029,0.371807292777007,0,0,0,0,0.352675943690684,0.6124909547064,0,0,0.159633859057151,0,0.252071696221718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0,0,0,0,0.157115589916002,0,0,0,0.47775168788705,0,0,0,0,0.801711364730253,0.207216164163037,0,0,0,0.118332000730565,0.170426809518315,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0.4226557275834,0.339854229375634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.380095503034311,0,0,0,0,0,0,0,0.20686599172379,0,0.23806443146374,0,0,0,0.0636471582781649,0,0,0,0,0,0,0.0814032686109745,0,0,0,0,0,0,0,0.402547587182052,0 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| ||
|short_description=p@chr18:65085254..65085257,- | |short_description=p@chr18:65085254..65085257,- | ||
}} | }} |
Latest revision as of 01:56, 26 July 2015
Short description: | p@chr18:65085254..65085257, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr18:65085254..65085257, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
aortic smooth muscle cell | 1.09e-07 | 10 |
smooth muscle cell of the coronary artery | 6.88e-07 | 3 |
hair follicle dermal papilla cell | 7.28e-07 | 3 |
stem cell of epidermis | 7.28e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
systemic artery | 2.12e-08 | 33 |
systemic arterial system | 2.12e-08 | 33 |
aorta | 9.51e-08 | 21 |
aortic system | 9.51e-08 | 21 |
blood vessel smooth muscle | 1.09e-07 | 10 |
arterial system smooth muscle | 1.09e-07 | 10 |
artery smooth muscle tissue | 1.09e-07 | 10 |
aorta smooth muscle tissue | 1.09e-07 | 10 |
coronary artery | 6.88e-07 | 3 |
dermal papilla | 7.28e-07 | 3 |
papillary layer of dermis | 7.28e-07 | 3 |