FFCP PHASE1:Hg19::chr13:111156072..111156084,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1284 | |EntrezGene=1284 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=2203 | |HGNC=2203 | ||
|TSSclassifier=strong | |||
|UniProt=P08572 | |UniProt=P08572 | ||
|association_with_transcript=-475bp_to_J02760_5end | |association_with_transcript=-475bp_to_J02760_5end | ||
|cluster_id=chr13:111156072..111156084,+ | |||
|coexpression_cluster_id=C69 | |||
|description=CAGE_peak_17_at_COL4A2_5end | |description=CAGE_peak_17_at_COL4A2_5end | ||
|id=chr13:111156072..111156084,+ | |id=chr13:111156072..111156084,+ | ||
|ontology_enrichment_celltype=CL:0000763!8.29e-27!112;CL:0000049!8.29e-27!112;CL:0002194!6.20e-24!63;CL:0000576!6.20e-24!63;CL:0000040!6.20e-24!63;CL:0000559!6.20e-24!63;CL:0002009!5.62e-23!65;CL:0000557!2.51e-22!71;CL:0002057!2.07e-21!42;CL:0000839!7.99e-21!70;CL:0000860!1.31e-19!45;CL:0000766!1.29e-18!76;CL:0002032!3.28e-17!165;CL:0000837!3.28e-17!165;CL:0000037!4.49e-16!172;CL:0000566!4.49e-16!172;CL:0000988!1.31e-14!182;CL:0002087!1.68e-11!119;CL:0002031!9.57e-11!124;CL:0000738!1.04e-08!140;CL:0002619!1.21e-08!3;CL:0000134!3.40e-08!358;CL:0000219!5.63e-08!390;CL:0002320!8.36e-08!365 | |ontology_enrichment_celltype=CL:0000763!8.29e-27!112;CL:0000049!8.29e-27!112;CL:0002194!6.20e-24!63;CL:0000576!6.20e-24!63;CL:0000040!6.20e-24!63;CL:0000559!6.20e-24!63;CL:0002009!5.62e-23!65;CL:0000557!2.51e-22!71;CL:0002057!2.07e-21!42;CL:0000839!7.99e-21!70;CL:0000860!1.31e-19!45;CL:0000766!1.29e-18!76;CL:0002032!3.28e-17!165;CL:0000837!3.28e-17!165;CL:0000037!4.49e-16!172;CL:0000566!4.49e-16!172;CL:0000988!1.31e-14!182;CL:0002087!1.68e-11!119;CL:0002031!9.57e-11!124;CL:0000738!1.04e-08!140;CL:0002619!1.21e-08!3;CL:0000134!3.40e-08!358;CL:0000219!5.63e-08!390;CL:0002320!8.36e-08!365 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.70e-18;33!CL:0002057;1.70e-18;33!CL:0000473;1.20e-12;39!CL:0000234;1.20e-12;39!CL:0002032;2.60e-12;1!CL:0000557;2.60e-12;1!CL:0000576;1.16e-09;48!CL:0000763;6.67e-09;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,9.39e-21,108;CL:0000049,9.39e-21,108;CL:0002032,1.24e-17,161;CL:0000837,1.24e-17,161;CL:0000037,8.19e-17,168;CL:0000860,5.82e-16,42;CL:0002057,5.82e-16,42;CL:0000988,7.49e-16,177;CL:0000473,7.36e-14,48;CL:0000234,7.36e-14,48;CL:0000557,4.97e-12,67;CL:0002194,6.52e-11,59;CL:0000576,6.52e-11,59;CL:0000040,6.52e-11,59;CL:0000559,6.52e-11,59;CL:0002009,1.57e-10,61;CL:0000839,1.12e-09,66;CL:0000766,8.28e-09,72;CL:0002087,2.91e-08,115;CL:0002031,7.29e-08,120;CL:0000738,8.77e-07,136;CL:0000134,8.92e-07,354 | |||
|ontology_enrichment_development_v019=CL:0002057;2.23e-13;42!CL:0000049;2.64e-07;108 | |||
|ontology_enrichment_disease=DOID:1036!7.01e-12!8;DOID:8692!1.32e-08!31;DOID:1240!9.73e-08!39;DOID:2531!1.53e-07!51;DOID:0060083!1.53e-07!51 | |ontology_enrichment_disease=DOID:1036!7.01e-12!8;DOID:8692!1.32e-08!31;DOID:1240!9.73e-08!39;DOID:2531!1.53e-07!51;DOID:0060083!1.53e-07!51 | ||
|ontology_enrichment_disease_v019=DOID:1240;2.77e-13;39!DOID:1036;6.32e-13;8!DOID:8692;1.49e-12;31!DOID:2531;3.18e-09;51!DOID:0060083;3.18e-09;51 | |||
|ontology_enrichment_disease_v019_2=DOID:1240,2.29e-13,39;DOID:2531,3.80e-13,51;DOID:0060083,3.80e-13,51;DOID:1036,5.05e-13,8;DOID:8692,1.58e-12,31 | |||
|ontology_enrichment_uberon=UBERON:0002371!5.63e-19!80;UBERON:0001474!3.90e-17!86;UBERON:0004765!1.17e-14!101;UBERON:0001434!1.17e-14!101;UBERON:0002390!2.63e-13!102;UBERON:0003061!2.63e-13!102;UBERON:0002405!5.73e-12!115;UBERON:0002193!1.75e-11!112;UBERON:0002204!1.61e-09!167;UBERON:0002384!1.94e-08!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.71e-10,76;UBERON:0001474,1.18e-09,82;UBERON:0004765,1.05e-08,90;UBERON:0002405,2.17e-08,93;UBERON:0002390,6.58e-08,98;UBERON:0003061,6.58e-08,98;UBERON:0001434,9.94e-08,100;UBERON:0002384,2.22e-07,371;UBERON:0002193,4.46e-07,108 | |||
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| ||
|short_description=p17@COL4A2 | |short_description=p17@COL4A2 | ||
}} | }} |
Latest revision as of 12:59, 16 September 2015
Short description: | p17@COL4A2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_17_at_COL4A2_5end |
Coexpression cluster: | C69_anaplastic_CD14_cord_hairy_mycosis_adult_NK |
Association with transcript: | -475bp_to_J02760_5end |
EntrezGene: | COL4A2 |
HGNC: | 2203 |
UniProt: | P08572 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 9.39e-21 | 108 |
common myeloid progenitor | 9.39e-21 | 108 |
hematopoietic oligopotent progenitor cell | 1.24e-17 | 161 |
hematopoietic multipotent progenitor cell | 1.24e-17 | 161 |
hematopoietic stem cell | 8.19e-17 | 168 |
classical monocyte | 5.82e-16 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.82e-16 | 42 |
hematopoietic cell | 7.49e-16 | 177 |
defensive cell | 7.36e-14 | 48 |
phagocyte | 7.36e-14 | 48 |
granulocyte monocyte progenitor cell | 4.97e-12 | 67 |
monopoietic cell | 6.52e-11 | 59 |
monocyte | 6.52e-11 | 59 |
monoblast | 6.52e-11 | 59 |
promonocyte | 6.52e-11 | 59 |
macrophage dendritic cell progenitor | 1.57e-10 | 61 |
myeloid lineage restricted progenitor cell | 1.12e-09 | 66 |
myeloid leukocyte | 8.28e-09 | 72 |
nongranular leukocyte | 2.91e-08 | 115 |
hematopoietic lineage restricted progenitor cell | 7.29e-08 | 120 |
leukocyte | 8.77e-07 | 136 |
mesenchymal cell | 8.92e-07 | 354 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.71e-10 | 76 |
bone element | 1.18e-09 | 82 |
skeletal element | 1.05e-08 | 90 |
immune system | 2.17e-08 | 93 |
hematopoietic system | 6.58e-08 | 98 |
blood island | 6.58e-08 | 98 |
skeletal system | 9.94e-08 | 100 |
connective tissue | 2.22e-07 | 371 |
hemolymphoid system | 4.46e-07 | 108 |
Ontology term | p-value | n |
---|---|---|
leukemia | 2.29e-13 | 39 |
hematologic cancer | 3.80e-13 | 51 |
immune system cancer | 3.80e-13 | 51 |
chronic leukemia | 5.05e-13 | 8 |
myeloid leukemia | 1.58e-12 | 31 |