FFCP PHASE1:Hg19::chr13:109644678..109644725,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr13:109644678..109644725,+ | |||
|coexpression_cluster_id=C391 | |||
|description=CAGE_peak_at_chr13:109644678..109644725,+ | |description=CAGE_peak_at_chr13:109644678..109644725,+ | ||
|id=chr13:109644678..109644725,+ | |id=chr13:109644678..109644725,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000082;6.95e-12;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000082,6.95e-12,19 | |||
|ontology_enrichment_development_v019=UBERON:0008947;2.67e-08;29!UBERON:0001041;4.53e-08;30 | |||
|ontology_enrichment_disease=DOID:4231!8.69e-10!2;DOID:1907!8.69e-10!2;DOID:4556!5.80e-07!3 | |ontology_enrichment_disease=DOID:4231!8.69e-10!2;DOID:1907!8.69e-10!2;DOID:4556!5.80e-07!3 | ||
|ontology_enrichment_disease_v019=DOID:4556;2.39e-66;3!DOID:3908;1.48e-40;5!DOID:3905;2.62e-23;9!DOID:1324;1.22e-14;15!DOID:0050615;8.02e-14;16 | |||
|ontology_enrichment_disease_v019_2=DOID:4556,2.39e-66,3;DOID:3908,1.48e-40,5;DOID:3905,2.62e-23,9;DOID:1324,1.22e-14,15;DOID:0050615,8.02e-14,16 | |||
|ontology_enrichment_uberon=UBERON:0002134!3.75e-18!1;UBERON:0005208!3.75e-18!1;UBERON:0005946!3.75e-18!1;UBERON:0005965!3.75e-18!1;UBERON:0002078!3.75e-18!1;UBERON:0002680!5.20e-17!9;UBERON:0001895!5.20e-17!9;UBERON:0010092!5.20e-17!9;UBERON:0004733!6.31e-13!12;UBERON:0002028!6.31e-13!12;UBERON:0007277!6.31e-13!12;UBERON:0004732!5.56e-12!13;UBERON:0002037!5.68e-12!6;UBERON:0006215!5.68e-12!6;UBERON:0003076!1.82e-10!15;UBERON:0003057!1.82e-10!15;UBERON:0002081!9.46e-10!2;UBERON:0002133!9.46e-10!2;UBERON:0003978!6.50e-07!3;UBERON:0009751!6.50e-07!3;UBERON:0004151!6.50e-07!3;UBERON:0000946!6.50e-07!3;UBERON:0002523!6.50e-07!3;UBERON:0005983!6.50e-07!3;UBERON:0004145!6.50e-07!3;UBERON:0002165!6.50e-07!3;UBERON:0002062!6.50e-07!3;UBERON:0007280!6.50e-07!3 | |ontology_enrichment_uberon=UBERON:0002134!3.75e-18!1;UBERON:0005208!3.75e-18!1;UBERON:0005946!3.75e-18!1;UBERON:0005965!3.75e-18!1;UBERON:0002078!3.75e-18!1;UBERON:0002680!5.20e-17!9;UBERON:0001895!5.20e-17!9;UBERON:0010092!5.20e-17!9;UBERON:0004733!6.31e-13!12;UBERON:0002028!6.31e-13!12;UBERON:0007277!6.31e-13!12;UBERON:0004732!5.56e-12!13;UBERON:0002037!5.68e-12!6;UBERON:0006215!5.68e-12!6;UBERON:0003076!1.82e-10!15;UBERON:0003057!1.82e-10!15;UBERON:0002081!9.46e-10!2;UBERON:0002133!9.46e-10!2;UBERON:0003978!6.50e-07!3;UBERON:0009751!6.50e-07!3;UBERON:0004151!6.50e-07!3;UBERON:0000946!6.50e-07!3;UBERON:0002523!6.50e-07!3;UBERON:0005983!6.50e-07!3;UBERON:0004145!6.50e-07!3;UBERON:0002165!6.50e-07!3;UBERON:0002062!6.50e-07!3;UBERON:0007280!6.50e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0004802;6.95e-12;19!UBERON:0000115;6.95e-12;19!UBERON:0002048;1.80e-10;22!UBERON:0004807;1.80e-10;22!UBERON:0000117;1.80e-10;22!UBERON:0000171;1.80e-10;22!UBERON:0000170;1.80e-10;22!UBERON:0005178;4.53e-08;34!UBERON:0002224;4.53e-08;34!UBERON:0005181;2.32e-07;35 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004802,6.95e-12,19;UBERON:0000115,6.95e-12,19;UBERON:0002048,1.80e-10,22;UBERON:0000117,1.80e-10,22;UBERON:0000171,1.80e-10,22;UBERON:0000170,1.80e-10,22;UBERON:0005597,1.80e-10,22;UBERON:0000118,1.80e-10,22;UBERON:0004807,1.52e-08,28;UBERON:0005178,2.74e-07,34;UBERON:0002224,2.74e-07,34;UBERON:0005181,4.03e-07,35;UBERON:0005153,8.21e-07,37 | |||
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|short_description=p@chr13:109644678..109644725,+ | |short_description=p@chr13:109644678..109644725,+ | ||
}} | }} |
Latest revision as of 14:26, 24 July 2015
Short description: | p@chr13:109644678..109644725, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:109644678..109644725, + |
Coexpression cluster: | C391_large_bronchioalveolar_fibrosarcoma_lung_pancreatic_giant_testis |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of lung | 6.95e-12 | 19 |
Ontology term | p-value | n |
---|---|---|
respiratory tract epithelium | 6.95e-12 | 19 |
lung epithelium | 6.95e-12 | 19 |
lung | 1.80e-10 | 22 |
respiratory tube | 1.80e-10 | 22 |
respiration organ | 1.80e-10 | 22 |
pair of lungs | 1.80e-10 | 22 |
lung primordium | 1.80e-10 | 22 |
lung bud | 1.80e-10 | 22 |
respiratory system epithelium | 1.52e-08 | 28 |
thoracic cavity element | 2.74e-07 | 34 |
thoracic cavity | 2.74e-07 | 34 |
thoracic segment organ | 4.03e-07 | 35 |
epithelial bud | 8.21e-07 | 37 |
Ontology term | p-value | n |
---|---|---|
lung large cell carcinoma | 2.39e-66 | 3 |
non-small cell lung carcinoma | 1.48e-40 | 5 |
lung carcinoma | 2.62e-23 | 9 |
lung cancer | 1.22e-14 | 15 |
respiratory system cancer | 8.02e-14 | 16 |