FFCP PHASE1:Hg19::chr13:108922311..108922328,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10673 | |EntrezGene=10673 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11929 | |HGNC=11929 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-246bp_to_ENST00000479435_5end | |association_with_transcript=-246bp_to_ENST00000479435_5end | ||
|cluster_id=chr13:108922311..108922328,+ | |||
|coexpression_cluster_id=C1186 | |||
|description=CAGE_peak_4_at_TNFSF13B_5end | |description=CAGE_peak_4_at_TNFSF13B_5end | ||
|id=chr13:108922311..108922328,+ | |id=chr13:108922311..108922328,+ | ||
|ontology_enrichment_celltype=CL:0000763!3.30e-51!112;CL:0000049!3.30e-51!112;CL:0000766!4.52e-49!76;CL:0002194!9.79e-45!63;CL:0000576!9.79e-45!63;CL:0000040!9.79e-45!63;CL:0000559!9.79e-45!63;CL:0000037!4.63e-43!172;CL:0000566!4.63e-43!172;CL:0002009!1.26e-42!65;CL:0002057!3.30e-42!42;CL:0000557!3.49e-40!71;CL:0000839!3.44e-39!70;CL:0002032!4.22e-39!165;CL:0000837!4.22e-39!165;CL:0000988!1.65e-38!182;CL:0000860!4.21e-38!45;CL:0000738!1.58e-35!140;CL:0002087!3.52e-30!119;CL:0002031!2.34e-25!124;CL:0000094!2.54e-09!8;CL:0002393!2.69e-09!9;CL:0002397!2.69e-09!9;CL:0000134!3.72e-08!358;CL:0002320!5.50e-08!365 | |ontology_enrichment_celltype=CL:0000763!3.30e-51!112;CL:0000049!3.30e-51!112;CL:0000766!4.52e-49!76;CL:0002194!9.79e-45!63;CL:0000576!9.79e-45!63;CL:0000040!9.79e-45!63;CL:0000559!9.79e-45!63;CL:0000037!4.63e-43!172;CL:0000566!4.63e-43!172;CL:0002009!1.26e-42!65;CL:0002057!3.30e-42!42;CL:0000557!3.49e-40!71;CL:0000839!3.44e-39!70;CL:0002032!4.22e-39!165;CL:0000837!4.22e-39!165;CL:0000988!1.65e-38!182;CL:0000860!4.21e-38!45;CL:0000738!1.58e-35!140;CL:0002087!3.52e-30!119;CL:0002031!2.34e-25!124;CL:0000094!2.54e-09!8;CL:0002393!2.69e-09!9;CL:0002397!2.69e-09!9;CL:0000134!3.72e-08!358;CL:0002320!5.50e-08!365 | ||
|ontology_enrichment_celltype_v019=CL:0000860;7.06e-59;33!CL:0002057;7.06e-59;33!CL:0000473;6.58e-52;39!CL:0000234;6.58e-52;39!CL:0000576;3.44e-50;48!CL:0000766;3.35e-37;69!CL:0000763;9.93e-26;100!CL:0000094;1.48e-16;8!CL:0002087;1.75e-13;104!CL:0000081;1.45e-11;11!CL:0000738;2.04e-11;136!CL:0002393;2.10e-11;6!CL:0002397;2.10e-11;6!CL:0000988;1.23e-09;177!CL:0000775;6.52e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,7.25e-84,72;CL:0000473,5.02e-83,48;CL:0000234,5.02e-83,48;CL:0000860,2.52e-80,42;CL:0002057,2.52e-80,42;CL:0000763,6.42e-77,108;CL:0000049,6.42e-77,108;CL:0002194,1.24e-75,59;CL:0000576,1.24e-75,59;CL:0000040,1.24e-75,59;CL:0000559,1.24e-75,59;CL:0002009,1.11e-72,61;CL:0000557,5.79e-68,67;CL:0000839,4.49e-66,66;CL:0000037,6.79e-57,168;CL:0000988,6.20e-53,177;CL:0002032,6.50e-50,161;CL:0000837,6.50e-50,161;CL:0000738,2.01e-49,136;CL:0002087,3.62e-41,115;CL:0002031,5.17e-34,120;CL:0000134,3.09e-18,354;CL:0002320,1.76e-17,361;CL:0000094,1.64e-16,8;CL:0002393,1.83e-16,9;CL:0002397,1.83e-16,9;CL:0000219,7.91e-15,386;CL:0000048,7.29e-13,427;CL:0000723,2.12e-12,433;CL:0000034,2.35e-12,441;CL:0000081,1.56e-11,11;CL:0000775,6.52e-08,3 | |||
|ontology_enrichment_development_v019=CL:0002057;2.97e-57;42!CL:0000049;1.18e-22;108 | |||
|ontology_enrichment_disease=DOID:8692!6.38e-08!31 | |ontology_enrichment_disease=DOID:8692!6.38e-08!31 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.71e-45!102;UBERON:0003061!2.71e-45!102;UBERON:0002193!4.05e-41!112;UBERON:0002371!1.56e-35!80;UBERON:0001474!2.32e-31!86;UBERON:0004765!1.31e-26!101;UBERON:0001434!1.31e-26!101;UBERON:0002405!1.25e-25!115;UBERON:0007023!9.42e-22!115;UBERON:0003081!2.13e-14!216;UBERON:0002204!3.17e-14!167;UBERON:0000178!4.68e-09!15;UBERON:0000179!4.68e-09!15;UBERON:0000463!4.68e-09!15;UBERON:0002384!2.45e-07!375 | |ontology_enrichment_uberon=UBERON:0002390!2.71e-45!102;UBERON:0003061!2.71e-45!102;UBERON:0002193!4.05e-41!112;UBERON:0002371!1.56e-35!80;UBERON:0001474!2.32e-31!86;UBERON:0004765!1.31e-26!101;UBERON:0001434!1.31e-26!101;UBERON:0002405!1.25e-25!115;UBERON:0007023!9.42e-22!115;UBERON:0003081!2.13e-14!216;UBERON:0002204!3.17e-14!167;UBERON:0000178!4.68e-09!15;UBERON:0000179!4.68e-09!15;UBERON:0000463!4.68e-09!15;UBERON:0002384!2.45e-07!375 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.76e-17;15!UBERON:0000179;2.76e-17;15!UBERON:0000463;2.76e-17;15!UBERON:0002390;5.66e-10;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.73e-73,98;UBERON:0003061,1.73e-73,98;UBERON:0002193,2.83e-67,108;UBERON:0002371,1.76e-60,76;UBERON:0001474,6.13e-55,82;UBERON:0002405,1.09e-50,93;UBERON:0004765,1.08e-48,90;UBERON:0001434,2.71e-42,100;UBERON:0003081,2.43e-29,203;UBERON:0002204,2.00e-21,167;UBERON:0000178,2.46e-17,15;UBERON:0000179,2.46e-17,15;UBERON:0000463,2.46e-17,15;UBERON:0002384,1.89e-16,371;UBERON:0000926,3.82e-13,315;UBERON:0004120,3.82e-13,315;UBERON:0006603,3.82e-13,315 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0.229240217243854,0.328402357799783,0.0787107813136792,3.14691421479123,3.83829398097213,5.10893206943051,0,0,0,0,0,1.17440175733939,3.87796785972314,5.41470008169383,3.90619567288533,6.49354875295781,2.26725566213286,4.37878464978117,15.703009788193,9.44689859222024,9.46077838632483,10.4593066607558,6.16751832032739,6.19412741790207,41.1400121020675,32.7885704357249,16.7902383220896,21.0294865249337,8.39130088658974,10.8341189275473,11.4827827120989,4.09359225086769,5.16864014223695,20.8137046812214,7.70229664982625,16.6227652707751,77.844906844065,46.6744958834619,44.7535988059329,20.3146467040009,7.94339314567596,7.4738669879469,41.7072784326194,19.8163508999677,13.4657083717172,24.2159801053348,8.47038562771399,9.81033401066742,6.97142444829408,9.779797798392,6.49941801075965,14.0410788933119,13.9664510342601,16.7154610164963,5.98526761856622,4.97291692997725,8.58521522693779,0,2.18455444504853,0,3.41384178053206,0,0,0,0,0,0,0,0,0.560508562981536,1.05353633910031,0,0,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0.164437904603676,0,0,0,0,0,0.113309342697566,0,0,0,0.637130828648193,0,0,0.602300476311091,0.255973222308837,1.24930726552346,0.947109008176067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0.97364218096405,0.348259474598534,0.664789802594326,4.05434061319081,3.43196946468077,4.08603251462521,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,40.8519294051796,34.9002237733493,0,0,0,0,0,0,0.560677600142307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.37600571456411,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0.323292113637624,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0.217879444092406,0,0,0,0,0,0,0,0,0,0,1.18157981336281,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.87894419479671,0.936017060556951,2.82399208348584,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,2.43247561282381,12.054170194371,0,0,0,0,0.144781306667579,0,0,0,0.394061520403854,0,0.128343036279748,0,0,0,0,0,60.6695689397218,17.9496875522415,93.243490523108,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.54889657470352,4.09856981555372,2.66818894508611,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0.107420244868274,0.145016693914229,0,0,0,0,0,0,0,0,0.6970372701606,1.23213432070436,0,0,0,0,0,0.316379424718726,0,0,0,0,0,0,0,0,0,0,0,0,12.4293879711955,0,0.136499911407986,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0.941438007767792,0,0,0,0,11.6712950123399,9.94028369285088,5.12682468456746,5.71756261098694,12.3408681925858,13.6179395350471,11.8806916192385,11.8968776444141,0,0,0,0,0,0,0,0.997896857164083,0.191505370132367,0.635020748171649,0.324621940274555,1.12318871245384,1.36940807419915,1.41011906195721,0,0,1.605880751037,4.84319297258514,6.81353980304522,6.52660155035953,0.307240764308458,0.671028323677248,0.667396566847634,5.27547857585509,0.556812347790485,0,0,0,21.1480507631774,0,0.586032717087576,0,0,0,0,0.296964680832639,0,0.994147647766298,0.140669416410513,0.111308705022906,0.16480387422676,0,0.796991953004279,0.552567831062295,0,0,0.123084805461069,0,0,0,2.04628948090749,0.591860433821602,11.974154617347,0,0,0.278304294485554,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0.482385754501632,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,1.06606955203727,0,0,1.16348177330109,0,0,0,0,0.158936578980379,0,0,0,0,0,0.176915129006678,1.22206028986725,0,0,0,0.202203398942031,0,0,0,0,0,0,0,0,3.41207529993835,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0,0.0969890164884194,0,0.225980740780532,0,0,0.126621591911757,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,2.40168115483916,0.547621515567972,12.7746588066972,0,0,0.837847203816763,0.687481272035051,0,0.199679000498991,0,0.446342914883745,0,0,0,0,0,0,0,0,0.795229689809303,0.136203406111576,0,0,0,0,0,0.0607495566580247,0,0.0788057072991982,0,0.105600336519406,0,0,0.714695326373367,0.662091970365432,0,0,0,0,0,0.164185041498678,0,0,0.439656701034247,0,0.258565912723101,0.52893040697076,0,0,1.70859860108311,0.471612915298998,2.07119527673598,4.46549419630756,0,0,0,0,0.2506898940227,0,0,0,0,0.244052529803926,0.500763722825999,1.14681839138014,0,0.558867626472451,0,0,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0.147855149989634,0,0,0,0,0.265841714557995,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.260994291965212,0,0,0.734210113519403,0,0,0,0,0,0.168942440653073,0,0,0,0.138258436151731,0.194860308839388,0.265729680626726,0,0,0,0,0,0.106691729694141,0.172214979660816,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0.3062454773532,0.128458450192919,0,0.159633859057151,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0.270150338473579,0,0.413373593002368,0,0,0,0,0,0.255524855279191,0.535701835878287,0.336283722218824,1.21393120847326,0,0.354809480650555,0.115233987555779,0,0.135939465953663,0.0657727735628491,0,0,0.235479278551542,0.157115589916002,0,0,0,0,0.3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| ||
|short_description=p4@TNFSF13B | |short_description=p4@TNFSF13B | ||
}} | }} |
Latest revision as of 11:05, 16 September 2015
Short description: | p4@TNFSF13B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_TNFSF13B_5end |
Coexpression cluster: | C1186_acute_Neutrophils_CD14_Eosinophils_Whole_Smooth_granulocyte |
Association with transcript: | -246bp_to_ENST00000479435_5end |
EntrezGene: | TNFSF13B |
HGNC: | 11929 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.73e-73 | 98 |
blood island | 1.73e-73 | 98 |
hemolymphoid system | 2.83e-67 | 108 |
bone marrow | 1.76e-60 | 76 |
bone element | 6.13e-55 | 82 |
immune system | 1.09e-50 | 93 |
skeletal element | 1.08e-48 | 90 |
skeletal system | 2.71e-42 | 100 |
lateral plate mesoderm | 2.43e-29 | 203 |
musculoskeletal system | 2.00e-21 | 167 |
blood | 2.46e-17 | 15 |
haemolymphatic fluid | 2.46e-17 | 15 |
organism substance | 2.46e-17 | 15 |
connective tissue | 1.89e-16 | 371 |
mesoderm | 3.82e-13 | 315 |
mesoderm-derived structure | 3.82e-13 | 315 |
presumptive mesoderm | 3.82e-13 | 315 |