FFCP PHASE1:Hg19::chr18:48405426..48405458,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4200 | |EntrezGene=4200 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6984 | |HGNC=6984 | ||
|TSSclassifier=strong | |||
|UniProt=Q9BWL6,B2R8J2,P23368 | |UniProt=Q9BWL6,B2R8J2,P23368 | ||
|association_with_transcript=0bp_to_ENST00000382927,NM_001168335,NM_002396,uc002ley.2,uc010dpd.2_5end | |association_with_transcript=0bp_to_ENST00000382927,NM_001168335,NM_002396,uc002ley.2,uc010dpd.2_5end | ||
|cluster_id=chr18:48405426..48405458,+ | |||
|description=CAGE_peak_2_at_ME2_5end | |description=CAGE_peak_2_at_ME2_5end | ||
|id=chr18:48405426..48405458,+ | |id=chr18:48405426..48405458,+ | ||
|ontology_enrichment_celltype=CL:0000037!2.14e-20!172;CL:0000566!2.14e-20!172;CL:0002032!8.75e-18!165;CL:0000837!8.75e-18!165;CL:0000988!9.67e-18!182;CL:0000542!1.13e-15!53;CL:0000051!1.13e-15!53;CL:0000738!1.45e-15!140;CL:0000838!2.08e-15!52;CL:0002087!1.66e-12!119;CL:0002031!1.16e-11!124;CL:0000084!9.98e-09!25;CL:0000827!9.98e-09!25;CL:0000945!1.17e-07!24;CL:0000826!1.17e-07!24;CL:0000791!3.28e-07!18;CL:0000789!3.28e-07!18;CL:0002420!3.28e-07!18;CL:0002419!3.28e-07!18;CL:0000790!3.28e-07!18 | |ontology_enrichment_celltype=CL:0000037!2.14e-20!172;CL:0000566!2.14e-20!172;CL:0002032!8.75e-18!165;CL:0000837!8.75e-18!165;CL:0000988!9.67e-18!182;CL:0000542!1.13e-15!53;CL:0000051!1.13e-15!53;CL:0000738!1.45e-15!140;CL:0000838!2.08e-15!52;CL:0002087!1.66e-12!119;CL:0002031!1.16e-11!124;CL:0000084!9.98e-09!25;CL:0000827!9.98e-09!25;CL:0000945!1.17e-07!24;CL:0000826!1.17e-07!24;CL:0000791!3.28e-07!18;CL:0000789!3.28e-07!18;CL:0002420!3.28e-07!18;CL:0002419!3.28e-07!18;CL:0000790!3.28e-07!18 | ||
|ontology_enrichment_celltype_v019=CL:0000542;1.70e-09;53!CL:0000084;7.71e-09;25!CL:0000945;1.24e-07;24!CL:0000791;2.84e-07;18!CL:0000789;2.84e-07;18!CL:0002419;2.84e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,8.73e-22,168;CL:0002032,4.37e-19,161;CL:0000837,4.37e-19,161;CL:0000988,5.39e-19,177;CL:0000738,6.92e-17,136;CL:0000542,1.13e-15,53;CL:0000051,1.13e-15,53;CL:0000838,2.08e-15,52;CL:0002087,9.39e-14,115;CL:0002031,8.09e-13,120;CL:0000084,9.97e-09,25;CL:0000827,9.97e-09,25;CL:0000945,1.17e-07,24;CL:0000826,1.17e-07,24;CL:0000791,3.28e-07,18;CL:0000789,3.28e-07,18;CL:0002420,3.28e-07,18;CL:0002419,3.28e-07,18;CL:0000790,3.28e-07,18 | |||
|ontology_enrichment_development_v019=CL:0000051;1.70e-09;53!CL:0000790;2.84e-07;18 | |||
|ontology_enrichment_disease=DOID:2531!2.89e-12!51;DOID:0060083!2.89e-12!51;DOID:1240!7.38e-10!39;DOID:8692!3.43e-07!31 | |||
|ontology_enrichment_disease_v019=DOID:2531;8.43e-08;51!DOID:0060083;8.43e-08;51!DOID:1240;9.50e-08;39!DOID:8692;2.56e-07;31 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,2.89e-12,51;DOID:0060083,2.89e-12,51;DOID:1240,7.37e-10,39;DOID:8692,3.43e-07,31 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p2@ME2 | |short_description=p2@ME2 | ||
}} | }} |
Latest revision as of 18:44, 19 September 2015
Short description: | p2@ME2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ME2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000382927, NM_001168335, NM_002396, uc002ley.2, uc010dpd.2_5end |
EntrezGene: | ME2 |
HGNC: | 6984 |
UniProt: | Q9BWL6B2R8J2P23368 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 8.73e-22 | 168 |
hematopoietic oligopotent progenitor cell | 4.37e-19 | 161 |
hematopoietic multipotent progenitor cell | 4.37e-19 | 161 |
hematopoietic cell | 5.39e-19 | 177 |
leukocyte | 6.92e-17 | 136 |
lymphocyte | 1.13e-15 | 53 |
common lymphoid progenitor | 1.13e-15 | 53 |
lymphoid lineage restricted progenitor cell | 2.08e-15 | 52 |
nongranular leukocyte | 9.39e-14 | 115 |
hematopoietic lineage restricted progenitor cell | 8.09e-13 | 120 |
T cell | 9.97e-09 | 25 |
pro-T cell | 9.97e-09 | 25 |
lymphocyte of B lineage | 1.17e-07 | 24 |
pro-B cell | 1.17e-07 | 24 |
mature alpha-beta T cell | 3.28e-07 | 18 |
alpha-beta T cell | 3.28e-07 | 18 |
immature T cell | 3.28e-07 | 18 |
mature T cell | 3.28e-07 | 18 |
immature alpha-beta T cell | 3.28e-07 | 18 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 2.89e-12 | 51 |
immune system cancer | 2.89e-12 | 51 |
leukemia | 7.37e-10 | 39 |
myeloid leukemia | 3.43e-07 | 31 |