FFCP PHASE1:Hg19::chr12:94730080..94730085,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51134 | |EntrezGene=51134 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17966 | |HGNC=17966 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-456bp_to_ENST00000546587_5end | |association_with_transcript=-456bp_to_ENST00000546587_5end | ||
|cluster_id=chr12:94730080..94730085,- | |||
|description=CAGE_peak_14_at_CCDC41_5end | |description=CAGE_peak_14_at_CCDC41_5end | ||
|id=chr12:94730080..94730085,- | |id=chr12:94730080..94730085,- | ||
|ontology_enrichment_celltype=CL:0002097!1.07e-13!2;CL:0000174!1.41e-09!3 | |ontology_enrichment_celltype=CL:0002097!1.07e-13!2;CL:0000174!1.41e-09!3 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0004140;4.66e-66;1!UBERON:0005062;8.00e-18;4!UBERON:0007284;8.00e-18;4!UBERON:0004872;9.89e-11;7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003978!4.66e-34!3;UBERON:0009751!4.66e-34!3;UBERON:0000946!4.66e-34!3;UBERON:0002523!4.66e-34!3;UBERON:0005983!4.66e-34!3;UBERON:0002165!4.66e-34!3;UBERON:0002062!4.66e-34!3;UBERON:0007280!4.66e-34!3;UBERON:0002135!2.78e-26!1;UBERON:0002146!4.61e-26!1;UBERON:0005623!4.61e-26!1;UBERON:0002342!1.14e-16!14;UBERON:0005062!1.14e-16!14;UBERON:0002133!7.30e-14!2;UBERON:0000948!4.77e-10!24;UBERON:0005498!4.77e-10!24;UBERON:0004140!4.77e-10!24;UBERON:0009881!4.77e-10!24;UBERON:0004141!4.77e-10!24;UBERON:0003084!4.77e-10!24;UBERON:0007005!4.77e-10!24;UBERON:0004139!4.77e-10!24;UBERON:0004291!4.77e-10!24;UBERON:0002369!1.41e-09!3;UBERON:0001235!1.41e-09!3;UBERON:0006858!1.41e-09!3;UBERON:0007100!5.29e-09!27 | |ontology_enrichment_uberon=UBERON:0003978!4.66e-34!3;UBERON:0009751!4.66e-34!3;UBERON:0000946!4.66e-34!3;UBERON:0002523!4.66e-34!3;UBERON:0005983!4.66e-34!3;UBERON:0002165!4.66e-34!3;UBERON:0002062!4.66e-34!3;UBERON:0007280!4.66e-34!3;UBERON:0002135!2.78e-26!1;UBERON:0002146!4.61e-26!1;UBERON:0005623!4.61e-26!1;UBERON:0002342!1.14e-16!14;UBERON:0005062!1.14e-16!14;UBERON:0002133!7.30e-14!2;UBERON:0000948!4.77e-10!24;UBERON:0005498!4.77e-10!24;UBERON:0004140!4.77e-10!24;UBERON:0009881!4.77e-10!24;UBERON:0004141!4.77e-10!24;UBERON:0003084!4.77e-10!24;UBERON:0007005!4.77e-10!24;UBERON:0004139!4.77e-10!24;UBERON:0004291!4.77e-10!24;UBERON:0002369!1.41e-09!3;UBERON:0001235!1.41e-09!3;UBERON:0006858!1.41e-09!3;UBERON:0007100!5.29e-09!27 | ||
|ontology_enrichment_uberon_v019=UBERON:0002135;1.71e-66;1!UBERON:0002133;4.27e-34;2!UBERON:0003978;2.93e-23;3!UBERON:0000946;2.93e-23;3!UBERON:0000948;4.14e-13;22!UBERON:0007100;1.12e-11;25!UBERON:0010313;5.93e-08;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002135,2.39e-66,1;UBERON:0002133,5.04e-34,2;UBERON:0003978,3.27e-23,3;UBERON:0009751,3.27e-23,3;UBERON:0000946,3.27e-23,3;UBERON:0002523,3.27e-23,3;UBERON:0005983,3.27e-23,3;UBERON:0002165,3.27e-23,3;UBERON:0002062,3.27e-23,3;UBERON:0007280,3.27e-23,3;UBERON:0000948,4.20e-12,24;UBERON:0005498,4.20e-12,24;UBERON:0004140,4.20e-12,24;UBERON:0009881,4.20e-12,24;UBERON:0004141,4.20e-12,24;UBERON:0003084,4.20e-12,24;UBERON:0007005,4.20e-12,24;UBERON:0004139,4.20e-12,24;UBERON:0004291,4.20e-12,24;UBERON:0007100,6.90e-11,27;UBERON:0004797,8.99e-11,7;UBERON:0010313,6.13e-08,10;UBERON:0002342,6.13e-08,10;UBERON:0005062,6.13e-08,10 | |||
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|short_description=p14@CCDC41 | |short_description=p14@CCDC41 | ||
}} | }} |
Latest revision as of 01:24, 16 September 2015
Short description: | p14@CCDC41 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_14_at_CCDC41_5end |
Coexpression cluster: | NA |
Association with transcript: | -456bp_to_ENST00000546587_5end |
EntrezGene: | CCDC41 |
HGNC: | 17966 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mitral valve | 2.39e-66 | 1 |
atrioventricular valve | 5.04e-34 | 2 |
valve | 3.27e-23 | 3 |
cardiac mesenchyme | 3.27e-23 | 3 |
cardial valve | 3.27e-23 | 3 |
tunica intima | 3.27e-23 | 3 |
heart layer | 3.27e-23 | 3 |
endocardium | 3.27e-23 | 3 |
endocardial cushion | 3.27e-23 | 3 |
presumptive endocardium | 3.27e-23 | 3 |
heart | 4.20e-12 | 24 |
primitive heart tube | 4.20e-12 | 24 |
primary heart field | 4.20e-12 | 24 |
anterior lateral plate mesoderm | 4.20e-12 | 24 |
heart tube | 4.20e-12 | 24 |
heart primordium | 4.20e-12 | 24 |
cardiac mesoderm | 4.20e-12 | 24 |
cardiogenic plate | 4.20e-12 | 24 |
heart rudiment | 4.20e-12 | 24 |
primary circulatory organ | 6.90e-11 | 27 |
blood vessel layer | 8.99e-11 | 7 |
neural crest-derived structure | 6.13e-08 | 10 |
neural crest | 6.13e-08 | 10 |
neural fold | 6.13e-08 | 10 |