FFCP PHASE1:Hg19::chr12:8983894..8983910,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=41022 | |HGNC=41022 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-351bp_to_ENST00000537288_5end | |association_with_transcript=-351bp_to_ENST00000537288_5end | ||
|cluster_id=chr12:8983894..8983910,- | |||
|coexpression_cluster_id=C128 | |||
|description=CAGE_peak_1_at_A2ML1-AS1_5end | |description=CAGE_peak_1_at_A2ML1-AS1_5end | ||
|id=chr12:8983894..8983910,- | |id=chr12:8983894..8983910,- | ||
|ontology_enrichment_celltype=CL:0000039!1.63e-49!7;CL:0000586!1.63e-49!7;CL:0002322!7.04e-47!5;CL:0000540!8.52e-15!6;CL:0000031!8.52e-15!6;CL:0000404!8.52e-15!6;CL:0000047!3.07e-11!8;CL:0000148!4.76e-09!10;CL:0000541!4.76e-09!10 | |ontology_enrichment_celltype=CL:0000039!1.63e-49!7;CL:0000586!1.63e-49!7;CL:0002322!7.04e-47!5;CL:0000540!8.52e-15!6;CL:0000031!8.52e-15!6;CL:0000404!8.52e-15!6;CL:0000047!3.07e-11!8;CL:0000148!4.76e-09!10;CL:0000541!4.76e-09!10 | ||
|ontology_enrichment_celltype_v019=CL:0000039;6.32e-117;7!CL:0000586;6.32e-117;7!CL:0000083;1.63e-09;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,5.61e-117,7;CL:0000586,5.61e-117,7;CL:0000083,1.70e-09,4 | |||
|ontology_enrichment_development_v019=UBERON:0009117;4.03e-53;10!UBERON:0005564;4.03e-53;10 | |||
|ontology_enrichment_disease=DOID:3095!6.59e-21!22;DOID:2994!6.59e-21!22;DOID:1799!4.15e-11!1;DOID:10165!4.15e-11!1;DOID:1798!4.15e-11!1 | |ontology_enrichment_disease=DOID:3095!6.59e-21!22;DOID:2994!6.59e-21!22;DOID:1799!4.15e-11!1;DOID:10165!4.15e-11!1;DOID:1798!4.15e-11!1 | ||
|ontology_enrichment_disease_v019=DOID:3095;8.85e-38;22!DOID:2994;8.85e-38;22!DOID:1799;8.34e-34;1!DOID:10165;8.34e-34;1!DOID:1798;8.34e-34;1!DOID:1793;1.63e-09;4!DOID:170;9.23e-07;6 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,8.52e-38,22;DOID:2994,8.52e-38,22;DOID:1799,9.85e-34,1;DOID:10165,9.85e-34,1;DOID:1798,9.85e-34,1;DOID:1793,1.70e-09,4;DOID:0050687,1.02e-08,143;DOID:305,3.05e-08,106;DOID:170,9.49e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0000473!5.30e-20!8;UBERON:0003135!1.29e-14!11;UBERON:0000991!9.89e-08!21;UBERON:0009196!9.89e-08!21;UBERON:0009117!9.89e-08!21;UBERON:0005564!9.89e-08!21;UBERON:0004176!2.19e-07!22;UBERON:0003101!2.19e-07!22;UBERON:0000079!2.19e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;3.66e-66;8!UBERON:0003135;2.24e-48;11!UBERON:0000991;9.82e-26;21!UBERON:0003101;1.34e-24;22!UBERON:0000079;1.34e-24;22!UBERON:0002323;5.00e-17;45!UBERON:0002553;6.37e-11;52!UBERON:0004458;1.40e-10;48!UBERON:0003133;1.53e-09;44!UBERON:0000922;3.14e-09;49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,3.66e-66,8;UBERON:0003135,2.24e-48,11;UBERON:0000991,9.82e-26,21;UBERON:0009196,9.82e-26,21;UBERON:0009117,9.82e-26,21;UBERON:0005564,9.82e-26,21;UBERON:0004176,1.34e-24,22;UBERON:0003101,1.34e-24,22;UBERON:0000079,1.34e-24,22;UBERON:0002323,2.13e-18,46;UBERON:0004458,2.63e-17,49;UBERON:0003886,9.39e-16,54;UBERON:0002553,5.26e-14,61;UBERON:0003133,1.25e-11,48;UBERON:0005156,1.45e-09,59;UBERON:0000990,1.45e-09,59 | |||
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|short_description=p1@A2ML1-AS1 | |short_description=p1@A2ML1-AS1 | ||
}} | }} |
Latest revision as of 07:18, 25 September 2015
Short description: | p1@A2ML1-AS1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_A2ML1-AS1_5end |
Coexpression cluster: | C128_testicular_choriocarcinoma_H9_teratocarcinoma_pancreatic_iPS_HES3GFP |
Association with transcript: | -351bp_to_ENST00000537288_5end |
EntrezGene: | NA |
HGNC: | 41022 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 5.61e-117 | 7 |
germ cell | 5.61e-117 | 7 |
epithelial cell of pancreas | 1.70e-09 | 4 |
Ontology term | p-value | n |
---|---|---|
testis | 3.66e-66 | 8 |
male reproductive organ | 2.24e-48 | 11 |
gonad | 9.82e-26 | 21 |
indifferent external genitalia | 9.82e-26 | 21 |
indifferent gonad | 9.82e-26 | 21 |
gonad primordium | 9.82e-26 | 21 |
external genitalia | 1.34e-24 | 22 |
male organism | 1.34e-24 | 22 |
male reproductive system | 1.34e-24 | 22 |
body cavity | 2.13e-18 | 46 |
body cavity or lining | 2.63e-17 | 49 |
body cavity precursor | 9.39e-16 | 54 |
anatomical cavity | 5.26e-14 | 61 |
reproductive organ | 1.25e-11 | 48 |
reproductive structure | 1.45e-09 | 59 |
reproductive system | 1.45e-09 | 59 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 8.52e-38 | 22 |
germ cell cancer | 8.52e-38 | 22 |
islet cell tumor | 9.85e-34 | 1 |
endocrine pancreas cancer | 9.85e-34 | 1 |
pancreatic endocrine carcinoma | 9.85e-34 | 1 |
pancreatic cancer | 1.70e-09 | 4 |
cell type cancer | 1.02e-08 | 143 |
carcinoma | 3.05e-08 | 106 |
endocrine gland cancer | 9.49e-07 | 6 |