FFCP PHASE1:Hg19::chr12:86230151..86230232,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9182 | |EntrezGene=9182 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15739 | |HGNC=15739 | ||
|TSSclassifier=strong | |||
|UniProt=O75901 | |UniProt=O75901 | ||
|association_with_transcript=85bp_to_NM_005447,uc001taf.1_5end | |association_with_transcript=85bp_to_NM_005447,uc001taf.1_5end | ||
|cluster_id=chr12:86230151..86230232,- | |||
|description=CAGE_peak_1_at_RASSF9_5end | |description=CAGE_peak_1_at_RASSF9_5end | ||
|id=chr12:86230151..86230232,- | |id=chr12:86230151..86230232,- | ||
|ontology_enrichment_celltype=CL:0000066!7.70e-08!254;CL:0000220!9.04e-07!246 | |ontology_enrichment_celltype=CL:0000066!7.70e-08!254;CL:0000220!9.04e-07!246 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,2.01e-07,42 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000477!2.17e-18!286;UBERON:0000467!1.34e-17!625;UBERON:0000468!2.15e-17!659;UBERON:0000480!2.36e-17!626;UBERON:0000481!9.45e-15!347;UBERON:0004111!1.52e-14!241;UBERON:0000483!2.98e-13!309;UBERON:0000119!4.59e-13!312;UBERON:0000475!5.60e-13!365;UBERON:0000062!1.09e-12!511;UBERON:0000922!4.29e-12!612;UBERON:0007023!5.12e-12!115;UBERON:0002050!3.00e-11!605;UBERON:0005423!3.00e-11!605;UBERON:0000923!7.24e-11!604;UBERON:0005291!7.24e-11!604;UBERON:0006598!7.24e-11!604;UBERON:0002532!7.24e-11!604;UBERON:0001048!8.43e-10!168;UBERON:0000025!3.73e-09!194;UBERON:0000064!7.23e-09!219;UBERON:0000153!1.84e-08!129;UBERON:0007811!1.84e-08!129;UBERON:0000033!6.50e-08!123;UBERON:0003103!4.12e-07!69;UBERON:0004121!4.53e-07!169;UBERON:0001004!4.93e-07!72 | |ontology_enrichment_uberon=UBERON:0000477!2.17e-18!286;UBERON:0000467!1.34e-17!625;UBERON:0000468!2.15e-17!659;UBERON:0000480!2.36e-17!626;UBERON:0000481!9.45e-15!347;UBERON:0004111!1.52e-14!241;UBERON:0000483!2.98e-13!309;UBERON:0000119!4.59e-13!312;UBERON:0000475!5.60e-13!365;UBERON:0000062!1.09e-12!511;UBERON:0000922!4.29e-12!612;UBERON:0007023!5.12e-12!115;UBERON:0002050!3.00e-11!605;UBERON:0005423!3.00e-11!605;UBERON:0000923!7.24e-11!604;UBERON:0005291!7.24e-11!604;UBERON:0006598!7.24e-11!604;UBERON:0002532!7.24e-11!604;UBERON:0001048!8.43e-10!168;UBERON:0000025!3.73e-09!194;UBERON:0000064!7.23e-09!219;UBERON:0000153!1.84e-08!129;UBERON:0007811!1.84e-08!129;UBERON:0000033!6.50e-08!123;UBERON:0003103!4.12e-07!69;UBERON:0004121!4.53e-07!169;UBERON:0001004!4.93e-07!72 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,9.30e-11,114;UBERON:0001048,3.76e-10,160;UBERON:0002050,1.58e-09,564;UBERON:0005423,2.72e-09,581;UBERON:0000922,6.79e-09,592;UBERON:0000923,3.41e-08,560;UBERON:0010316,3.41e-08,560;UBERON:0005291,3.41e-08,560;UBERON:0006598,3.41e-08,560;UBERON:0010317,3.41e-08,560;UBERON:0002532,3.41e-08,560;UBERON:0004111,4.18e-08,240;UBERON:0001004,1.04e-07,74;UBERON:0000153,3.33e-07,62;UBERON:0007811,3.33e-07,62 | |||
|phase1_expression=1.09007027562334,0.856402095563933,1.55049844505568,0,0.446961094427288,0,0,0,0,0.245733936501509,0.697801167972428,0,0,0,0.331397375727916,2.6893005858071,1.20538905604795,0.730310090387373,0,1.96993692922861,0.816002764977012,0.940364164434263,2.0036519099174,2.05311637609326,1.00434111675842,0.0764134057479513,0,0.0787107813136792,0,0,0.154816123316076,0,1.204823675113,2.21852406100073,0,0,0.587200878669695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.23779651843358,0,0,0,0,0,0,0,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.1903433156981,2.68280343881454,0.255725123687061,0,0,0,0,0,24.1063783768373,15.5210578223795,11.7698612828789,3.40545596294053,3.27865759463288,2.96627554227544,0,0,0,0,0,0.371457501329565,2.38514888840046,0,1.38856200643038,2.26123176769604,0.419499436209906,2.20094433552054,2.71693456497854,5.68516870172524,7.47109151642091,6.6944122552934,1.61131726843659,2.28081631715554,2.4406205754817,3.30896772311282,3.24056779152704,8.75137337183982,5.61323431565425,5.63057402416611,0,0,0.732806975721629,0,0,1.3082821564276,2.48485975847659,4.05217637326655,1.05927344650575,8.3182620017156,4.25602058638028,0.560677600142307,0,0.74000264525148,4.35695449559673,2.42479209725439,3.75962377160955,1.96764655938411,5.18558332031999,0.234321431833797,0,0,0,0.117434498643765,0.323745888736263,0,0,0,0.413303124703062,0,0,0,0,0,0,0,0,0,0.150238058906597,1.36118619792025,0,0,1.90738711043606,0.300091096084402,0.103052529238439,0.257640540045629,0.744467425326359,5.40084263172052,1.85130309806277,0.252433774244115,0.920498986422993,1.61646056818812,0.710019185033229,0.503760491138201,0.169560592310488,4.25173876959253,7.9096374971342,6.30970109855808,0.121973706129595,0.265059536642971,0.69716365721711,0.10366105501537,0.504641701751257,0,3.12899064659632,0.643240938192885,0,0,0,3.66751080123516,3.37169380156203,5.06123162755312,2.42646740011267,3.05031221729369,3.55905928666645,2.56179485504312,4.12065076763227,1.53898862778556,0.738155454624648,0,0.4115740113314,0,1.26755034821831,0.982827216677626,2.36315962672562,0,2.33678033231916,6.00487336044839,6.91426798074341,4.49607013030478,3.51851403440708,2.4998880192803,0.325808305310325,0,1.44331342025273,8.81071077810584,7.39674773685676,0.721832238805369,0.462985512576611,0.570762456703795,0,0,0,0,0,12.185398418281,10.0789276919316,4.96212840348353,3.22410681730254,3.48760726216754,1.53353071666084,0,0,0.207328115540772,0,0,0,0,0,1.71072446022705,0,0,0,0,0.87192013766656,0.2933531432838,0.646358578788889,3.57656445851882,0,0,1.04007436911366,0.257207374262142,0,0,0.142977993658148,0,0,0.325736184293735,0,0,0.904318131178758,0.871533458600294,0.699810938274399,0,0,0,1.19812427745791,0,5.70547620162874,0.579125226670317,1.02738161275192,1.25342674267927,0,0,0,0,4.31960861178188,0,3.09315525111078,1.17261385734044,2.55175500661265,0,0,0,0,0,0,1.66376689224646,1.07057393278297,4.88877486605197,6.09135357962109,2.10662269809403,2.27407504055985,2.0694614258501,3.98535359121262,1.29058417979192,0.0868836144680828,0.391602314925481,0,0,0,0,0,0,0,4.96215615637554,3.37616341233737,2.80660094433074,2.43464383585832,1.02341449813341,1.28683136914886,0,2.31314540703983,1.77561725313127,3.69572202062141,3.63478100428535,1.62694529843943,3.50492403815704,1.40354529212299,3.03867263488458,0.459257792658427,0.728364672026868,0.393373244878272,0.451199612907412,0.924184045252977,1.56869953835371,0,4.43316841350078,2.27466768141793,0.510281115829547,4.53423423814493,3.08454505380579,1.08378575017541,0,0.509752546090077,0,1.11937377361089,0,0,0,1.31205858279882,2.27764876265012,5.87333766392017,0.457847324091717,0.742585499285292,2.29706215198469,5.20048196829217,1.6068392984416,1.54673149267395,0.154048617114644,1.07452572308291,0.275673144969061,0.751941714077915,0.870100163485371,0.511359764496605,3.29418531892928,5.95025695299521,5.76570202095319,9.18811529961006,4.8555734810664,0.464845549297286,2.51849877464512,0.6970372701606,1.54016790088044,0.532306030317022,0.869932992075073,0.37064843820784,1.00187420719394,1.86079184679834,4.11293252134344,0.38126038784765,0.255897791311334,0,0.636406495851874,0,0.539617372749944,0.54907405947211,0.589062011728432,0.606547444719948,0,1.26377536871694,0,0.487426979262569,0,0,1.1312434556297,0,1.10273068709225,0.66343897524122,1.31535265576129,0,0,0,0.6196469961995,0,0.143411352204052,0,0,1.41904425628239,0.211107635297664,0.329294892959902,0,0.349934720244983,4.13755084719702,2.01090682660736,0,6.49592225359776,0,0,0,0.918893600827838,0,0,0,0,0,0,0,0,0,0,1.96032172784825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0,3.51619630252546,7.64571287021935,0,0,4.29740072527842,4.15750553165694,5.22173193568695,0,0.703347082052564,0,0,0.844501632511974,11.357135330311,4.42054264849836,0,0,0,0.311039587661807,1.07842021376792,1.43216939740487,0,5.42538731003135,0,4.44547960578548,0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| ||
|short_description=p1@RASSF9 | |short_description=p1@RASSF9 | ||
}} | }} |
Latest revision as of 04:21, 25 September 2015
Short description: | p1@RASSF9 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_RASSF9_5end |
Coexpression cluster: | NA |
Association with transcript: | 85bp_to_NM_005447, uc001taf.1_5end |
EntrezGene: | RASSF9 |
HGNC: | 15739 |
UniProt: | O75901 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 2.01e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
adult organism | 9.30e-11 | 114 |
primordium | 3.76e-10 | 160 |
embryonic structure | 1.58e-09 | 564 |
developing anatomical structure | 2.72e-09 | 581 |
embryo | 6.79e-09 | 592 |
germ layer | 3.41e-08 | 560 |
germ layer / neural crest | 3.41e-08 | 560 |
embryonic tissue | 3.41e-08 | 560 |
presumptive structure | 3.41e-08 | 560 |
germ layer / neural crest derived structure | 3.41e-08 | 560 |
epiblast (generic) | 3.41e-08 | 560 |
anatomical conduit | 4.18e-08 | 240 |
respiratory system | 1.04e-07 | 74 |
anterior region of body | 3.33e-07 | 62 |
craniocervical region | 3.33e-07 | 62 |