FFCP PHASE1:Hg19::chr12:85306453..85306460,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55117 | |EntrezGene=55117 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13621 | |HGNC=13621 | ||
|TSSclassifier=strong | |||
|UniProt=Q9H9F5,F8VX16 | |UniProt=Q9H9F5,F8VX16 | ||
|association_with_transcript=111bp_to_ENST00000450363,ENST00000551612_5end | |association_with_transcript=111bp_to_ENST00000450363,ENST00000551612_5end | ||
|cluster_id=chr12:85306453..85306460,- | |||
|description=CAGE_peak_6_at_SLC6A15_5end | |description=CAGE_peak_6_at_SLC6A15_5end | ||
|id=chr12:85306453..85306460,- | |id=chr12:85306453..85306460,- | ||
|ontology_enrichment_celltype=CL:0002551!8.27e-07!6;CL:0000333!9.04e-07!41 | |ontology_enrichment_celltype=CL:0002551!8.27e-07!6;CL:0000333!9.04e-07!41 | ||
|ontology_enrichment_celltype_v019=CL:0002566;7.47e-30;1!CL:0000147;6.09e-19;14!CL:0000148;2.18e-12;10!CL:0002567;9.43e-11;3!CL:0002577;9.43e-11;3!CL:0002586;9.43e-11;3!CL:0000149;2.18e-08;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002566,7.48e-30,1;CL:0000147,5.39e-19,14;CL:0000148,2.24e-12,10;CL:0000541,2.24e-12,10;CL:0002586,7.42e-11,3;CL:0002577,8.17e-11,3;CL:0002567,9.90e-11,3;CL:0000149,1.82e-08,4 | |||
|ontology_enrichment_development_v019=UBERON:0003056;9.43e-11;3 | |||
|ontology_enrichment_disease=DOID:171!1.33e-08!10;DOID:169!5.61e-07!6 | |ontology_enrichment_disease=DOID:171!1.33e-08!10;DOID:169!5.61e-07!6 | ||
|ontology_enrichment_disease_v019=DOID:1909;1.91e-15;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,2.37e-15,2 | |||
|ontology_enrichment_uberon=UBERON:0000073!6.79e-14!94;UBERON:0001016!6.79e-14!94;UBERON:0000924!5.89e-13!173;UBERON:0006601!5.89e-13!173;UBERON:0004121!1.08e-11!169;UBERON:0001893!2.34e-11!34;UBERON:0005743!3.74e-10!86;UBERON:0002791!4.43e-10!33;UBERON:0000033!5.28e-10!123;UBERON:0002020!9.23e-10!34;UBERON:0003528!9.23e-10!34;UBERON:0001049!1.51e-09!57;UBERON:0005068!1.51e-09!57;UBERON:0006241!1.51e-09!57;UBERON:0007135!1.51e-09!57;UBERON:0000153!3.39e-09!129;UBERON:0007811!3.39e-09!129;UBERON:0001869!3.91e-09!32;UBERON:0002616!4.27e-09!59;UBERON:0000955!6.31e-09!69;UBERON:0006238!6.31e-09!69;UBERON:0002780!7.20e-09!41;UBERON:0001890!7.20e-09!41;UBERON:0006240!7.20e-09!41;UBERON:0002346!1.08e-08!90;UBERON:0001017!1.11e-08!82;UBERON:0003080!1.39e-08!42;UBERON:0000013!2.15e-08!5;UBERON:0002410!2.15e-08!5;UBERON:0002619!3.70e-08!22;UBERON:0003056!6.25e-08!61;UBERON:0003075!1.89e-07!86;UBERON:0007284!1.89e-07!86;UBERON:0001950!2.05e-07!20;UBERON:0000956!5.47e-07!25;UBERON:0000203!5.47e-07!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0000966;1.61e-23;5!UBERON:0005388;1.61e-23;5!UBERON:0001802;1.61e-23;5!UBERON:0001781;9.43e-11;3!UBERON:0001782;9.43e-11;3!UBERON:0001987;2.18e-08;4!UBERON:0000019;6.38e-07;19!UBERON:0000047;6.38e-07;19!UBERON:0004088;6.38e-07;19!UBERON:0010230;6.38e-07;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000966,6.48e-20,6;UBERON:0005388,6.48e-20,6;UBERON:0001802,6.48e-20,6;UBERON:0001782,7.42e-11,3;UBERON:0005424,7.42e-11,3;UBERON:0001781,1.82e-08,4;UBERON:0001987,1.96e-08,4;UBERON:0004340,1.96e-08,4 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.936480230490962,1.1409436430889,0.149448680551801,0.117434498643765,0,0,0.816616685019573,0,0.826606249406124,0,0,0,0,0,0,0.277064115484183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.268675568108545,0,0,0,0,0,0,0,2.03193261734941,0.763976851116555,1.17217447210047,0,0.308482478109971,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0.205476322550383,0.179060963239896,0,0,0,0,0,0,0.773288812777695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,1.66435439510497,0,0,0,0,0,0,0,0,0,0.177561725313127,0.0821271560138091,0,0,0,0,0,0,0.182091168006717,0.131124414959424,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,1.95227036798582,0,0,0,0,0,0,0.096670718292122,0,0,0,0.107420244868274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0,0,0,0,0.117812402345686,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0,0,0.655894752046633,0,0,0,0,0,0,0.354761064070598,0,0,0.379473173765715,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0.140669416410513,0,0,0.211125408127993,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0.583209226766509,0.173624994933292,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123563938946503,0,0.067401132980677,0,0,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146178634172371,0.0821154570532092,0,0,0.677942222341597,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0.138348634936231,0,0.151649117541648,1.14186133417987,0,0,0,0,0,0,0,0,0,0.686520205190771,0.151230923763239,0,0.147855149989634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511577485214607,0.323474434190045,0.157265941855896,0.54604819096007,0,0.212574920101683,0,0,0,0,0,0,0,0.192687675289379,0,0.159633859057151,0.205116364240755,0,0.207471757392654,0.161475645631851,0,0,0.11796972334774,0,0,0,0,0,0,0.20170506870352,0,0,0,0,0.270150338473579,0,0,0,0,0,0,0.351742488719241,0,0,0,0,0,0,0,0,0.203909198930495,0.197318320688547,0,0,0,0,0,0,0,0,1.28657779517981,0,0,0,0,0.828864656652147,0,0,0,0,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118920090777569,0,0,0,0,0,0,0,0,0,0.297046400327086,0,0,0,0,0,0,0,0,0,0,0.143339583151451,0,0.135982980381829,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727345877715,0,0.0898252021065869,0,0,0,0,0,0 | ||
|short_description=p6@SLC6A15 | |short_description=p6@SLC6A15 | ||
}} | }} |
Latest revision as of 03:33, 25 September 2015
Short description: | p6@SLC6A15 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_SLC6A15_5end |
Coexpression cluster: | NA |
Association with transcript: | 111bp_to_ENST00000450363, ENST00000551612_5end |
EntrezGene: | SLC6A15 |
HGNC: | 13621 |
UniProt: | Q9H9F5F8VX16 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
dark melanocyte | 7.48e-30 | 1 |
pigment cell | 5.39e-19 | 14 |
melanocyte | 2.24e-12 | 10 |
melanoblast | 2.24e-12 | 10 |
retinal pigment epithelial cell | 7.42e-11 | 3 |
placental epithelial cell | 8.17e-11 | 3 |
light melanocyte | 9.90e-11 | 3 |
visual pigment cell | 1.82e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
retina | 6.48e-20 | 6 |
photoreceptor array | 6.48e-20 | 6 |
posterior segment of eyeball | 6.48e-20 | 6 |
pigmented layer of retina | 7.42e-11 | 3 |
presumptive retinal pigmented epithelium | 7.42e-11 | 3 |
layer of retina | 1.82e-08 | 4 |
placenta | 1.96e-08 | 4 |
allantois | 1.96e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
melanoma | 2.37e-15 | 2 |