FFCP PHASE1:Hg19::chr11:106047780..106047784,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr11:106047780..106047784,+
|short_description=p@chr11:106047780..106047784,+
|description=CAGE_peak_at_chr11:106047780..106047784,+
|association_with_transcri...") |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr11:106047780..106047784,+ | |||
|coexpression_cluster_id=C27 | |||
|description=CAGE_peak_at_chr11:106047780..106047784,+ | |||
|id=chr11:106047780..106047784,+ | |||
|ontology_enrichment_celltype=CL:0000039!1.08e-16!7;CL:0000586!1.08e-16!7;CL:0000946!3.28e-08!1;CL:0000786!3.28e-08!1;CL:0000980!3.28e-08!1 | |||
|ontology_enrichment_celltype_v019=CL:0000039;1.91e-13;7!CL:0000586;1.91e-13;7!CL:1000415;2.32e-12;2!CL:0002327;9.36e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,1.91e-13,7;CL:0000586,1.91e-13,7;CL:1000415,2.32e-12,2;CL:0002327,8.61e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0008425;4.59e-23;1!UBERON:0009117;2.94e-20;10!UBERON:0005564;2.94e-20;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:5093;9.36e-07;4!DOID:1612;9.36e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,8.61e-07,4;DOID:1612,8.61e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0000473!5.39e-32!8;UBERON:0003135!3.68e-23!11;UBERON:0000991!6.59e-12!21;UBERON:0009196!6.59e-12!21;UBERON:0009117!6.59e-12!21;UBERON:0005564!6.59e-12!21;UBERON:0004176!2.41e-11!22;UBERON:0003101!2.41e-11!22;UBERON:0000079!2.41e-11!22;UBERON:0002323!4.89e-09!46;UBERON:0004458!2.05e-08!49 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;4.07e-25;8!UBERON:0003135;1.73e-18;11!UBERON:0002323;4.67e-10;45!UBERON:0000991;5.11e-10;21!UBERON:0003101;1.36e-09;22!UBERON:0000079;1.36e-09;22!UBERON:0002114;8.96e-09;2!UBERON:0002110;1.12e-08;3!UBERON:0004458;5.37e-07;48!UBERON:0001911;9.36e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,4.60e-25,8;UBERON:0003135,1.90e-18,11;UBERON:0002323,4.09e-12,46;UBERON:0004458,2.20e-11,49;UBERON:0003886,2.40e-10,54;UBERON:0000991,5.35e-10,21;UBERON:0009196,5.35e-10,21;UBERON:0009117,5.35e-10,21;UBERON:0005564,5.35e-10,21;UBERON:0004176,1.43e-09,22;UBERON:0003101,1.43e-09,22;UBERON:0000079,1.43e-09,22;UBERON:0002553,3.56e-09,61;UBERON:0002114,8.96e-09,2;UBERON:0002110,1.12e-08,3;UBERON:0006242,1.12e-08,3;UBERON:0001911,8.61e-07,4;UBERON:0005333,8.61e-07,4;UBERON:0008425,8.61e-07,4;UBERON:0005311,8.61e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.860919069801795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.14584453560167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0.738508832766417,0,0,0,0,0,0,0,0,0,0,0,1.66173999992772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225595660617181,0,0,0,0,0,0.326465616318295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.04953580243319,0,0,0.751617097072463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.24444696704294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,38.2941865504215,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0,0,0,0,0,0,0.280272163313789,0,0,0,0,0.158013611732727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150962843566674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,22.2191273016468,0,0,0,0,0,0,0.713921808193872,1.3360870263278,0.0918948995348449,1.50424523575425,0.378893491091197,1.07185652062471,0,0,0.213233981900981,0,0,0,0.112131862580613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.860919069801795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.14584453560167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0.738508832766417,0,0,0,0,0,0,0,0,0,0,0,1.66173999992772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225595660617181,0,0,0,0,0,0.326465616318295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.04953580243319,0,0,0.751617097072463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.24444696704294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,38.2941865504215,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0,0,0,0,0,0,0.280272163313789,0,0,0,0,0.158013611732727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150962843566674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,22.2191273016468,0,0,0,0,0,0,0.713921808193872,1.3360870263278,0.0918948995348449,1.50424523575425,0.378893491091197,1.07185652062471,0,0,0.213233981900981,0,0,0,0.112131862580613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr11:106047780..106047784,+ | |||
}} | }} |
Latest revision as of 17:45, 23 July 2015
Short description: | p@chr11:106047780..106047784, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:106047780..106047784, + |
Coexpression cluster: | C27_pancreas_temporal_duodenum_salivary_ductus_umbilical_lung |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 1.91e-13 | 7 |
germ cell | 1.91e-13 | 7 |
epithelial cell of gall bladder | 2.32e-12 | 2 |
mammary gland epithelial cell | 8.61e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
testis | 4.60e-25 | 8 |
male reproductive organ | 1.90e-18 | 11 |
body cavity | 4.09e-12 | 46 |
body cavity or lining | 2.20e-11 | 49 |
body cavity precursor | 2.40e-10 | 54 |
gonad | 5.35e-10 | 21 |
indifferent external genitalia | 5.35e-10 | 21 |
indifferent gonad | 5.35e-10 | 21 |
gonad primordium | 5.35e-10 | 21 |
external genitalia | 1.43e-09 | 22 |
male organism | 1.43e-09 | 22 |
male reproductive system | 1.43e-09 | 22 |
anatomical cavity | 3.56e-09 | 61 |
duodenum | 8.96e-09 | 2 |
gallbladder | 1.12e-08 | 3 |
gall bladder primordium | 1.12e-08 | 3 |
mammary gland | 8.61e-07 | 4 |
mammary bud | 8.61e-07 | 4 |
mammary ridge | 8.61e-07 | 4 |
mammary placode | 8.61e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 8.61e-07 | 4 |
breast cancer | 8.61e-07 | 4 |