FFCP PHASE1:Hg19::chr12:76270706..76270708,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:76270706..76270708,- | |||
|coexpression_cluster_id=C91 | |||
|description=CAGE_peak_at_chr12:76270706..76270708,- | |description=CAGE_peak_at_chr12:76270706..76270708,- | ||
|id=chr12:76270706..76270708,- | |id=chr12:76270706..76270708,- | ||
|ontology_enrichment_celltype=CL:0002076!1.92e-22!43;CL:0002159!1.05e-16!13;CL:0000223!6.85e-16!59;CL:0002251!2.91e-14!21;CL:0002621!1.12e-12!3;CL:0002231!1.33e-12!3;CL:0000068!1.41e-12!3;CL:0000069!1.41e-12!3;CL:0000307!1.41e-12!3;CL:0000377!1.41e-12!3;CL:0000362!2.03e-10!8;CL:0002563!1.66e-09!4;CL:0000220!1.73e-09!246;CL:0002321!2.18e-09!248;CL:0000066!5.23e-08!254;CL:0000312!8.04e-08!5 | |ontology_enrichment_celltype=CL:0002076!1.92e-22!43;CL:0002159!1.05e-16!13;CL:0000223!6.85e-16!59;CL:0002251!2.91e-14!21;CL:0002621!1.12e-12!3;CL:0002231!1.33e-12!3;CL:0000068!1.41e-12!3;CL:0000069!1.41e-12!3;CL:0000307!1.41e-12!3;CL:0000377!1.41e-12!3;CL:0000362!2.03e-10!8;CL:0002563!1.66e-09!4;CL:0000220!1.73e-09!246;CL:0002321!2.18e-09!248;CL:0000066!5.23e-08!254;CL:0000312!8.04e-08!5 | ||
|ontology_enrichment_celltype_v019=CL:0000307;5.96e-34;3!CL:1000306;5.56e-26;4!CL:0002547;5.56e-26;4!CL:0002202;2.45e-12;9!CL:0002632;2.45e-12;9!CL:0002368;5.70e-09;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000068,5.96e-34,3;CL:0000069,5.96e-34,3;CL:0000307,5.96e-34,3;CL:0000377,5.96e-34,3;CL:1000306,5.56e-26,4;CL:0002547,5.56e-26,4;CL:0002202,2.45e-12,9;CL:0002632,2.45e-12,9;CL:0002368,5.70e-09,13 | |||
|ontology_enrichment_development_v019=CL:0000377;5.96e-34;3 | |||
|ontology_enrichment_disease=DOID:3151!3.10e-10!1;DOID:3149!3.10e-10!1 | |ontology_enrichment_disease=DOID:3151!3.10e-10!1;DOID:3149!3.10e-10!1 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001949!1.12e-12!3;UBERON:0001242!1.66e-09!4;UBERON:0001262!1.66e-09!4;UBERON:0004786!1.66e-09!4;UBERON:0004808!1.66e-09!4;UBERON:0001277!1.66e-09!4;UBERON:0003350!8.91e-08!5;UBERON:0003102!1.21e-07!95;UBERON:0000060!4.18e-07!12;UBERON:0000344!6.09e-07!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0004797;5.56e-26;4!UBERON:0000415;5.56e-26;4!UBERON:0007240;5.56e-26;4!UBERON:0005742;5.56e-26;4!UBERON:0005734;5.56e-26;4!UBERON:0004664;5.56e-26;4!UBERON:0004663;5.56e-26;4!UBERON:0003126;1.91e-15;7!UBERON:0001005;1.91e-15;7!UBERON:0007196;5.93e-08;15!UBERON:0001558;5.93e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000415,5.56e-26,4;UBERON:0007240,5.56e-26,4;UBERON:0005742,5.56e-26,4;UBERON:0005734,5.56e-26,4;UBERON:0004664,5.56e-26,4;UBERON:0004663,5.56e-26,4;UBERON:0004797,1.65e-15,7;UBERON:0003126,1.91e-15,7;UBERON:0001005,1.91e-15,7;UBERON:0007196,5.93e-08,15;UBERON:0001558,5.93e-08,15 | |||
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|short_description=p@chr12:76270706..76270708,- | |short_description=p@chr12:76270706..76270708,- | ||
}} | }} |
Latest revision as of 12:25, 24 July 2015
Short description: | p@chr12:76270706..76270708, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:76270706..76270708, - |
Coexpression cluster: | C91_Fibroblast_Smooth_mesenchymal_Mesothelial_Small_Preadipocyte_Hair |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
duct epithelial cell | 5.96e-34 | 3 |
branched duct epithelial cell | 5.96e-34 | 3 |
tracheal epithelial cell | 5.96e-34 | 3 |
tracheoblast | 5.96e-34 | 3 |
fibroblast of tunica adventitia of artery | 5.56e-26 | 4 |
fibroblast of the aortic adventitia | 5.56e-26 | 4 |
epithelial cell of tracheobronchial tree | 2.45e-12 | 9 |
epithelial cell of lower respiratory tract | 2.45e-12 | 9 |
respiratory epithelial cell | 5.70e-09 | 13 |
Ontology term | p-value | n |
---|---|---|
artery wall | 5.56e-26 | 4 |
tunica adventitia of artery | 5.56e-26 | 4 |
adventitia | 5.56e-26 | 4 |
tunica adventitia of blood vessel | 5.56e-26 | 4 |
aorta tunica adventitia | 5.56e-26 | 4 |
aorta wall | 5.56e-26 | 4 |
blood vessel layer | 1.65e-15 | 7 |
trachea | 1.91e-15 | 7 |
respiratory airway | 1.91e-15 | 7 |
tracheobronchial tree | 5.93e-08 | 15 |
lower respiratory tract | 5.93e-08 | 15 |