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FFCP PHASE1:Hg19::chr18:12657964..12657987,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=supported 
|DPIdataset=robust
|EntrezGene=56907
|EntrezGene=56907
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding
|HGNC=30622
|HGNC=30622
|TSSclassifier=strong
|UniProt=Q08AE8
|UniProt=Q08AE8
|association_with_transcript=-52bp_to_ENST00000383356,NM_001128626,NM_020148,uc002kre.2,uc010wzy.1_5end
|association_with_transcript=-52bp_to_ENST00000383356,NM_001128626,NM_020148,uc002kre.2,uc010wzy.1_5end
|cluster_id=chr18:12657964..12657987,-
|coexpression_cluster_id=C3706
|description=CAGE_peak_3_at_SPIRE1_5end
|description=CAGE_peak_3_at_SPIRE1_5end
|id=chr18:12657964..12657987,-
|id=chr18:12657964..12657987,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_development_v019=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001049!4.04e-23!57;UBERON:0005068!4.04e-23!57;UBERON:0006241!4.04e-23!57;UBERON:0007135!4.04e-23!57;UBERON:0000467!4.06e-23!625;UBERON:0000480!5.47e-23!626;UBERON:0000062!5.71e-21!511;UBERON:0000468!5.90e-21!659;UBERON:0000073!1.24e-20!94;UBERON:0001016!1.24e-20!94;UBERON:0005743!2.60e-20!86;UBERON:0000955!7.06e-20!69;UBERON:0006238!7.06e-20!69;UBERON:0001017!8.17e-20!82;UBERON:0002616!9.35e-20!59;UBERON:0003075!4.63e-19!86;UBERON:0007284!4.63e-19!86;UBERON:0003080!3.52e-18!42;UBERON:0002780!4.49e-18!41;UBERON:0001890!4.49e-18!41;UBERON:0006240!4.49e-18!41;UBERON:0002050!3.68e-17!605;UBERON:0005423!3.68e-17!605;UBERON:0000923!3.79e-17!604;UBERON:0005291!3.79e-17!604;UBERON:0006598!3.79e-17!604;UBERON:0002532!3.79e-17!604;UBERON:0002346!1.79e-16!90;UBERON:0002020!2.23e-16!34;UBERON:0003528!2.23e-16!34;UBERON:0001893!2.32e-16!34;UBERON:0000922!4.01e-16!612;UBERON:0002791!9.82e-16!33;UBERON:0004121!1.15e-15!169;UBERON:0000033!1.60e-15!123;UBERON:0001869!3.85e-15!32;UBERON:0007023!1.61e-14!115;UBERON:0000924!4.26e-14!173;UBERON:0006601!4.26e-14!173;UBERON:0003056!5.49e-14!61;UBERON:0000153!1.74e-13!129;UBERON:0007811!1.74e-13!129;UBERON:0000956!2.43e-12!25;UBERON:0000203!2.43e-12!25;UBERON:0002619!4.84e-12!22;UBERON:0004111!1.11e-11!241;UBERON:0000025!2.92e-11!194;UBERON:0001950!4.41e-11!20;UBERON:0000475!5.65e-11!365;UBERON:0000477!5.31e-10!286;UBERON:0000483!2.58e-09!309;UBERON:0000119!3.03e-09!312;UBERON:0000481!2.04e-07!347
|ontology_enrichment_uberon_v019=UBERON:0001893;3.74e-15;34!UBERON:0003528;6.02e-15;34!UBERON:0002020;6.02e-15;34!UBERON:0002791;1.42e-14;32!UBERON:0001869;1.47e-14;32!UBERON:0002780;3.06e-14;41!UBERON:0001890;3.06e-14;41!UBERON:0000073;3.17e-14;53!UBERON:0002616;3.17e-14;53!UBERON:0000956;2.62e-13;25!UBERON:0000203;2.62e-13;25!UBERON:0002619;4.47e-13;22!UBERON:0001950;5.49e-12;20!UBERON:0000955;1.24e-09;68!UBERON:0001016;8.70e-09;83!UBERON:0001017;2.40e-08;75
|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.62e-24,56;UBERON:0005068,1.62e-24,56;UBERON:0006241,1.62e-24,56;UBERON:0007135,1.62e-24,56;UBERON:0000073,8.32e-23,53;UBERON:0002616,8.32e-23,53;UBERON:0000955,8.27e-21,68;UBERON:0006238,8.27e-21,68;UBERON:0001017,2.24e-20,81;UBERON:0001016,2.80e-20,89;UBERON:0002780,2.21e-19,41;UBERON:0001890,2.21e-19,41;UBERON:0003080,2.21e-19,41;UBERON:0006240,2.21e-19,41;UBERON:0003075,7.64e-19,82;UBERON:0007284,7.64e-19,82;UBERON:0003528,1.38e-17,34;UBERON:0002020,1.38e-17,34;UBERON:0001893,1.44e-17,34;UBERON:0002346,2.34e-16,86;UBERON:0002791,2.58e-16,32;UBERON:0001869,2.87e-16,32;UBERON:0010371,7.27e-16,104;UBERON:0010314,1.16e-14,132;UBERON:0003056,1.26e-14,61;UBERON:0007023,5.42e-14,114;UBERON:0000956,2.71e-13,25;UBERON:0000203,2.71e-13,25;UBERON:0004121,4.53e-13,171;UBERON:0000924,4.53e-13,171;UBERON:0006601,4.53e-13,171;UBERON:0002619,5.47e-13,22;UBERON:0000922,1.16e-12,592;UBERON:0005423,3.73e-12,581;UBERON:0001950,5.74e-12,20;UBERON:0000025,6.27e-11,192;UBERON:0002050,1.20e-10,564;UBERON:0000923,1.57e-10,560;UBERON:0010316,1.57e-10,560;UBERON:0005291,1.57e-10,560;UBERON:0006598,1.57e-10,560;UBERON:0010317,1.57e-10,560;UBERON:0002532,1.57e-10,560;UBERON:0011216,2.68e-10,223;UBERON:0004111,6.72e-10,240;UBERON:0000483,8.24e-08,306;UBERON:0000119,1.19e-07,309
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|short_description=p3@SPIRE1
|short_description=p3@SPIRE1
}}
}}

Latest revision as of 19:56, 18 September 2015

Short description:p3@SPIRE1
Species:Human (Homo sapiens)
DPI dataset: Robust
TSS-like-by-RIKEN-classifier(Yes/No): Yes
DHS support(Yes/No): Yes
Description: CAGE_peak_3_at_SPIRE1_5end
Coexpression cluster:C3706_temporal_duodenum_occipital_Neural_mucinous_parietal_Neurons
Association with transcript: -52bp_to_ENST00000383356, NM_001128626, NM_020148, uc002kre.2, uc010wzy.1_5end
EntrezGene:SPIRE1
HGNC: 30622
UniProt: Q08AE8
Genome view:ZENBU


View on UCSC genome browser

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CAGE Expression



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  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

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