FFCP PHASE1:Hg19::chr12:72148614..72148699,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23011 | |EntrezGene=23011 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18263 | |HGNC=18263 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UL25 | |UniProt=Q9UL25 | ||
|association_with_transcript=0bp_to_ENST00000261263,NM_014999,uc001swt.2_5end | |association_with_transcript=0bp_to_ENST00000261263,NM_014999,uc001swt.2_5end | ||
|cluster_id=chr12:72148614..72148699,+ | |||
|coexpression_cluster_id=C26 | |||
|description=CAGE_peak_1_at_RAB21_5end | |description=CAGE_peak_1_at_RAB21_5end | ||
|id=chr12:72148614..72148699,+ | |id=chr12:72148614..72148699,+ | ||
|ontology_enrichment_celltype=CL:0000766!1.03e-22!76;CL:0000738!1.26e-20!140;CL:0000557!5.29e-20!71;CL:0000839!1.78e-18!70;CL:0002009!1.40e-17!65;CL:0002057!1.40e-17!42;CL:0002031!5.20e-17!124;CL:0002194!1.77e-16!63;CL:0000576!1.77e-16!63;CL:0000040!1.77e-16!63;CL:0000559!1.77e-16!63;CL:0000860!5.28e-16!45;CL:0002087!2.39e-14!119;CL:0000037!6.22e-10!172;CL:0000566!6.22e-10!172;CL:0002032!1.42e-09!165;CL:0000837!1.42e-09!165;CL:0000763!2.81e-09!112;CL:0000049!2.81e-09!112;CL:0000988!4.23e-09!182 | |ontology_enrichment_celltype=CL:0000766!1.03e-22!76;CL:0000738!1.26e-20!140;CL:0000557!5.29e-20!71;CL:0000839!1.78e-18!70;CL:0002009!1.40e-17!65;CL:0002057!1.40e-17!42;CL:0002031!5.20e-17!124;CL:0002194!1.77e-16!63;CL:0000576!1.77e-16!63;CL:0000040!1.77e-16!63;CL:0000559!1.77e-16!63;CL:0000860!5.28e-16!45;CL:0002087!2.39e-14!119;CL:0000037!6.22e-10!172;CL:0000566!6.22e-10!172;CL:0002032!1.42e-09!165;CL:0000837!1.42e-09!165;CL:0000763!2.81e-09!112;CL:0000049!2.81e-09!112;CL:0000988!4.23e-09!182 | ||
|ontology_enrichment_celltype_v019=CL:0000860;9.61e-18;33!CL:0002057;9.61e-18;33!CL:0000473;7.64e-15;39!CL:0000234;7.64e-15;39!CL:0000576;3.83e-11;48!CL:0000766;2.27e-10;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,9.75e-24,72;CL:0000738,4.61e-21,136;CL:0000557,5.77e-21,67;CL:0000839,2.26e-19,66;CL:0002009,1.67e-18,61;CL:0000473,8.46e-18,48;CL:0000234,8.46e-18,48;CL:0000860,1.40e-17,42;CL:0002057,1.40e-17,42;CL:0002031,2.01e-17,120;CL:0002194,2.28e-17,59;CL:0000576,2.28e-17,59;CL:0000040,2.28e-17,59;CL:0000559,2.28e-17,59;CL:0002087,1.05e-14,115;CL:0000037,4.47e-10,168;CL:0002032,1.01e-09,161;CL:0000837,1.01e-09,161;CL:0000763,1.65e-09,108;CL:0000049,1.65e-09,108;CL:0000988,1.87e-09,177 | |||
|ontology_enrichment_development_v019=CL:0002057;2.30e-13;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.43e-27!115;UBERON:0002390!1.18e-18!102;UBERON:0003061!1.18e-18!102;UBERON:0002371!6.97e-16!80;UBERON:0002193!2.49e-15!112;UBERON:0001474!1.38e-14!86;UBERON:0004765!4.72e-14!101;UBERON:0001434!4.72e-14!101;UBERON:0002405!3.88e-11!115;UBERON:0000062!1.61e-07!511;UBERON:0001049!1.99e-07!57;UBERON:0005068!1.99e-07!57;UBERON:0006241!1.99e-07!57;UBERON:0007135!1.99e-07!57 | |||
|ontology_enrichment_uberon_v019=UBERON:0007023;6.98e-08;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,6.01e-27,114;UBERON:0002390,3.10e-19,98;UBERON:0003061,3.10e-19,98;UBERON:0002371,1.57e-16,76;UBERON:0002193,9.53e-16,108;UBERON:0001474,3.98e-15,82;UBERON:0004765,1.46e-13,90;UBERON:0001434,2.06e-13,100;UBERON:0002405,9.39e-13,93;UBERON:0001049,2.35e-07,56;UBERON:0005068,2.35e-07,56;UBERON:0006241,2.35e-07,56;UBERON:0007135,2.35e-07,56 | |||
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| ||
|short_description=p1@RAB21 | |short_description=p1@RAB21 | ||
}} | }} |
Latest revision as of 17:33, 24 September 2015
Short description: | p1@RAB21 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_RAB21_5end |
Coexpression cluster: | C26_Eosinophils_Neutrophils_CD14_CD14CD16_Basophils_Monocytederived_Whole |
Association with transcript: | 0bp_to_ENST00000261263, NM_014999, uc001swt.2_5end |
EntrezGene: | RAB21 |
HGNC: | 18263 |
UniProt: | Q9UL25 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 9.75e-24 | 72 |
leukocyte | 4.61e-21 | 136 |
granulocyte monocyte progenitor cell | 5.77e-21 | 67 |
myeloid lineage restricted progenitor cell | 2.26e-19 | 66 |
macrophage dendritic cell progenitor | 1.67e-18 | 61 |
defensive cell | 8.46e-18 | 48 |
phagocyte | 8.46e-18 | 48 |
classical monocyte | 1.40e-17 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.40e-17 | 42 |
hematopoietic lineage restricted progenitor cell | 2.01e-17 | 120 |
monopoietic cell | 2.28e-17 | 59 |
monocyte | 2.28e-17 | 59 |
monoblast | 2.28e-17 | 59 |
promonocyte | 2.28e-17 | 59 |
nongranular leukocyte | 1.05e-14 | 115 |
hematopoietic stem cell | 4.47e-10 | 168 |
hematopoietic oligopotent progenitor cell | 1.01e-09 | 161 |
hematopoietic multipotent progenitor cell | 1.01e-09 | 161 |
myeloid cell | 1.65e-09 | 108 |
common myeloid progenitor | 1.65e-09 | 108 |
hematopoietic cell | 1.87e-09 | 177 |
Ontology term | p-value | n |
---|---|---|
adult organism | 6.01e-27 | 114 |
hematopoietic system | 3.10e-19 | 98 |
blood island | 3.10e-19 | 98 |
bone marrow | 1.57e-16 | 76 |
hemolymphoid system | 9.53e-16 | 108 |
bone element | 3.98e-15 | 82 |
skeletal element | 1.46e-13 | 90 |
skeletal system | 2.06e-13 | 100 |
immune system | 9.39e-13 | 93 |
neural tube | 2.35e-07 | 56 |
neural rod | 2.35e-07 | 56 |
future spinal cord | 2.35e-07 | 56 |
neural keel | 2.35e-07 | 56 |