FFCP PHASE1:Hg19::chr17:80275417..80275463,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=924 | |EntrezGene=924 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1695 | |HGNC=1695 | ||
|TSSclassifier=strong | |||
|UniProt=P09564,Q29VG3 | |UniProt=P09564,Q29VG3 | ||
|association_with_transcript=16bp_to_ENST00000312648,NM_006137,uc002kel.1,uc002kem.2,uc010din.2,uc010wvk.1_5end | |association_with_transcript=16bp_to_ENST00000312648,NM_006137,uc002kel.1,uc002kem.2,uc010din.2,uc010wvk.1_5end | ||
|cluster_id=chr17:80275417..80275463,- | |||
|coexpression_cluster_id=C2445 | |||
|description=CAGE_peak_1_at_CD7_5end | |description=CAGE_peak_1_at_CD7_5end | ||
|id=chr17:80275417..80275463,- | |id=chr17:80275417..80275463,- | ||
|ontology_enrichment_celltype=CL:0000738!7.57e-19!140;CL:0000037!7.65e-18!172;CL:0000566!7.65e-18!172;CL:0000988!9.99e-16!182;CL:0000084!4.49e-15!25;CL:0000827!4.49e-15!25;CL:0002032!5.79e-15!165;CL:0000837!5.79e-15!165;CL:0002087!5.93e-15!119;CL:0000791!7.86e-15!18;CL:0000789!7.86e-15!18;CL:0002420!7.86e-15!18;CL:0002419!7.86e-15!18;CL:0000790!7.86e-15!18;CL:0002031!1.15e-11!124;CL:0000542!5.97e-10!53;CL:0000051!5.97e-10!53;CL:0000625!6.36e-10!11;CL:0000838!1.05e-09!52;CL:0002057!1.25e-08!42;CL:0000766!1.50e-07!76;CL:0000860!2.70e-07!45 | |ontology_enrichment_celltype=CL:0000738!7.57e-19!140;CL:0000037!7.65e-18!172;CL:0000566!7.65e-18!172;CL:0000988!9.99e-16!182;CL:0000084!4.49e-15!25;CL:0000827!4.49e-15!25;CL:0002032!5.79e-15!165;CL:0000837!5.79e-15!165;CL:0002087!5.93e-15!119;CL:0000791!7.86e-15!18;CL:0000789!7.86e-15!18;CL:0002420!7.86e-15!18;CL:0002419!7.86e-15!18;CL:0000790!7.86e-15!18;CL:0002031!1.15e-11!124;CL:0000542!5.97e-10!53;CL:0000051!5.97e-10!53;CL:0000625!6.36e-10!11;CL:0000838!1.05e-09!52;CL:0002057!1.25e-08!42;CL:0000766!1.50e-07!76;CL:0000860!2.70e-07!45 | ||
|ontology_enrichment_celltype_v019=CL:0000084;1.40e-20;25!CL:0000791;1.37e-19;18!CL:0000789;1.37e-19;18!CL:0002419;1.37e-19;18!CL:0000625;6.39e-13;11!CL:0000860;1.21e-09;33!CL:0002057;1.21e-09;33!CL:0002087;4.91e-08;104!CL:0000094;1.86e-07;8!CL:0000624;2.16e-07;6!CL:0000542;4.73e-07;53!CL:0000576;6.50e-07;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,5.47e-24,136;CL:0000037,1.18e-23,168;CL:0000988,1.42e-21,177;CL:0000084,1.50e-20,25;CL:0000827,1.50e-20,25;CL:0002032,1.02e-19,161;CL:0000837,1.02e-19,161;CL:0000791,1.36e-19,18;CL:0000789,1.36e-19,18;CL:0002420,1.36e-19,18;CL:0002419,1.36e-19,18;CL:0000790,1.36e-19,18;CL:0002087,1.37e-19,115;CL:0002031,1.73e-14,120;CL:0000625,6.39e-13,11;CL:0000542,3.17e-12,53;CL:0000051,3.17e-12,53;CL:0000838,6.75e-12,52;CL:0000860,2.21e-09,42;CL:0002057,2.21e-09,42;CL:0000766,5.24e-09,72;CL:0000763,8.28e-09,108;CL:0000049,8.28e-09,108;CL:0000094,1.84e-07,8;CL:0000624,2.15e-07,6;CL:0000473,3.11e-07,48;CL:0000234,3.11e-07,48 | |||
|ontology_enrichment_development_v019=CL:0000790;1.37e-19;18!CL:0002057;1.83e-07;42!CL:0000051;4.73e-07;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.93e-14!115;UBERON:0002390!2.60e-08!102;UBERON:0003061!2.60e-08!102;UBERON:0002193!4.91e-07!112 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.52e-09;15!UBERON:0000179;2.52e-09;15!UBERON:0000463;2.52e-09;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.13e-11,98;UBERON:0003061,1.13e-11,98;UBERON:0002193,1.21e-10,108;UBERON:0000178,2.57e-09,15;UBERON:0000179,2.57e-09,15;UBERON:0000463,2.57e-09,15;UBERON:0007023,6.62e-09,114 | |||
|phase1_expression=0,0,0,1.0007329835313,0,0,0,0,0.261185628199839,0,0,0,0,1.73272894144065,0.994192127183747,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0.246301768349837,0,97.5543406585282,68.3216328613039,75.5502681782451,0,0,0,0,0,1.17440175733939,38.2256831886995,28.6778559882303,53.1676633253837,2.91090116511902,14.8991086368731,7.98484259665978,2.4717700592526,3.40088349319928,1.4555043671269,3.48643555358527,6.98985409637104,2.47765096716083,2.8769239232215,4.61089271752381,0.945928919554341,3.44745680736619,7.10033151942209,2.70852973188684,2.44715041405386,6.27684145133045,0.898893937780338,7.95818120164347,8.34415470397843,2.55734850319616,1.9791078011203,3.39088217956774,1.27867425159808,5.80418477257168,7.94339314567596,2.4912889959823,4.27122730936464,1.0429658368404,1.08594422352558,1.81619850790011,11.0483290796269,0.949387162322653,0.211255286311942,0,0,0.112328631146495,0,0,0,0,0,0,0.546138611262131,0,0.426730222566507,0,0,1.32208974556972,0,1.1384259382189,5.28513470433845,3.05818582500183,0,35.3120394678368,1.84368859342554,126.681091953308,121.440325689492,120.276876914713,161.000595061223,146.013175451848,106.99920409605,161.706184578566,66.1778113897931,65.4025114594139,47.8513212300622,61.2016732108935,60.2029202710673,74.78412484693,212.947086461761,189.02341216552,217.642117387024,256.23918114404,138.586148950471,239.386349513397,140.956822315772,78.5602011883939,58.4166657320471,57.6884897804466,160.875534233669,160.817613102535,157.77503937843,88.6887451368082,109.684525759337,167.407173580143,147.749005275467,142.055143467341,160.882181093336,130.778255738135,184.21664173892,0,0,0.12786256184353,0,0,0,0,0,0,0,0.966182642624386,3.07800827419625,0.728590576585084,0.741568885568859,0,0.696518949197069,0.797747763113191,15.2633999555419,18.3038371449641,13.7439275491939,0,0,0,0,0,0,0,0,0,0,0,0.760272105718513,0.24406205754817,0,0,0,0,0,0,0,0,15.8136500923276,19.3890132074163,0,0,0,0,0,2.12801029319014,0,0,0,0.622422070799533,0,0.163461903113459,0.151357427644931,0.576175924479999,0,0,0,0.747243402759005,0,0,0.140450806702248,0.816616685019573,0.737005903870608,2.37649296704261,0,0,0,0,0.168336113954066,0.125118519871964,1.10825646193673,0,0,0.150238058906597,0,0,0.213557388818567,0,0.300091096084402,0.103052529238439,0,0,0,0,0,0.0920498986422993,0,0,0,0.169560592310488,0,0,0,0,0.132529768321485,0.69716365721711,0.207322110030741,1.00928340350251,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,3.9313088667105,2.36315962672562,65.3365387133683,0.860919069801795,0,0,0,0,0.277765335475589,0.325808305310325,0,0,0,0,0,0,0,0,0,0,0.234004265139238,0,0,0,0,0,0,0,0,0,0.621984346622316,0.432359860250884,0.6312121671319,0.507983154337352,0,0,0,0,0,0,0,0,0,0,7.15312891703765,0,0,0,0,0,1.0656887160644,2.28764789853036,313.092666310863,3.29296134712308,0,1.77695974371273,7.91951872933429,29.842498328899,20.0452695478068,22.3939500247808,0,0,0,0,0,0,0,0,0,70.1653001399481,273.872756680679,171.423922013316,251.552351108307,0,0,0,0,0,4.49404214368309,5.9832291840805,7.45947924184864,0.736148950314839,0.500170521059677,0.542530047399471,0,0,0,0,0,0,0,0,0,0.347534457872331,1.56640925970192,0.686286847621712,112.895342263097,108.288528810946,116.973403352575,0,0,0,0,0,0,0.128139149255701,1.02341449813341,0,0,0,0,0.0821271560138091,0,0.116210378459959,0.966875596732978,0,0,0,0,0.262248829918848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.25509159403384,0.0915694648183434,0.495056999523528,0,0,0,0,0,0,0,0.537101224341368,0.290033387828457,1.19317278382541,0,0,0,0,0,0,0.31481234683064,0.6970372701606,0,0,0,0,0,0.372158369359667,0,0,1.79128453917934,0.42793898803392,0.318203247925937,0,1.2591072030832,2.19629623788844,1.7671860351853,0,0,0,0.975267478179181,0,0,0.136499911407986,0.565621727814851,0,0,0,0,4.6302042741335,0.655894752046633,0,4.957175969596,0,0.860468113224309,5.20719917369542,0,0,0.844430541190656,0,2.65631221636001,4.54915136318478,0.0962221127255121,2.68120910214315,0,5.55448424582997,0,0,0,0,70.0277700740394,56.5831533285358,85.4470780761244,87.1928298175508,88.0315264404456,59.0110713185373,69.1240239664787,117.382526091552,0.854592569019785,0,0,1.48642540100575,0,23.2633827749314,170.267259274382,72.8464705729781,133.47924298226,0,0,27.518123455119,0,0,5.01268954180134,61.2836235641804,0,0,0,0,0,0,0,0,0,32.0027237264052,0.270455678475983,0.99921590399346,15.5085705596634,0,3.95572084034114,0,3.00897137549192,0,0.23874448473769,0.593929361665277,0,0.994147647766298,0,0,0,0,7.57142355354065,40.6137355830787,0,0,0.738508832766417,0,0,0,0,8.18740266786549,150.874348178572,0,0.969332746095218,0.649376687132959,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0.120596438625408,0,0.110579259931225,0.295547618953547,0.438770794307945,0,0,3.07801034015188,0,0,2.87224462111271,0,4.78501739597879,0.183195186803725,4.79731298416771,110.368762051395,12.715400767997,3.15802195610297,0,0,0,1.89753732724185,8.74151184392083,0,0,0,0.865554558968364,11.9431431729421,14.860870836561,20.7750249277433,0,0,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| ||
|short_description=p1@CD7 | |short_description=p1@CD7 | ||
}} | }} |
Latest revision as of 12:19, 18 September 2015
Short description: | p1@CD7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CD7_5end |
Coexpression cluster: | C2445_Mesenchymal_CD4_Natural_acute_thymus_CD8_hepatocellular |
Association with transcript: | 16bp_to_ENST00000312648, NM_006137, uc002kel.1, uc002kem.2, uc010din.2, uc010wvk.1_5end |
EntrezGene: | CD7 |
HGNC: | 1695 |
UniProt: | P09564Q29VG3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 5.47e-24 | 136 |
hematopoietic stem cell | 1.18e-23 | 168 |
hematopoietic cell | 1.42e-21 | 177 |
T cell | 1.50e-20 | 25 |
pro-T cell | 1.50e-20 | 25 |
hematopoietic oligopotent progenitor cell | 1.02e-19 | 161 |
hematopoietic multipotent progenitor cell | 1.02e-19 | 161 |
mature alpha-beta T cell | 1.36e-19 | 18 |
alpha-beta T cell | 1.36e-19 | 18 |
immature T cell | 1.36e-19 | 18 |
mature T cell | 1.36e-19 | 18 |
immature alpha-beta T cell | 1.36e-19 | 18 |
nongranular leukocyte | 1.37e-19 | 115 |
hematopoietic lineage restricted progenitor cell | 1.73e-14 | 120 |
CD8-positive, alpha-beta T cell | 6.39e-13 | 11 |
lymphocyte | 3.17e-12 | 53 |
common lymphoid progenitor | 3.17e-12 | 53 |
lymphoid lineage restricted progenitor cell | 6.75e-12 | 52 |
classical monocyte | 2.21e-09 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.21e-09 | 42 |
myeloid leukocyte | 5.24e-09 | 72 |
myeloid cell | 8.28e-09 | 108 |
common myeloid progenitor | 8.28e-09 | 108 |
granulocyte | 1.84e-07 | 8 |
CD4-positive, alpha-beta T cell | 2.15e-07 | 6 |
defensive cell | 3.11e-07 | 48 |
phagocyte | 3.11e-07 | 48 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.13e-11 | 98 |
blood island | 1.13e-11 | 98 |
hemolymphoid system | 1.21e-10 | 108 |
blood | 2.57e-09 | 15 |
haemolymphatic fluid | 2.57e-09 | 15 |
organism substance | 2.57e-09 | 15 |
adult organism | 6.62e-09 | 114 |