FFCP PHASE1:Hg19::chr17:80274229..80274242,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:80274229..80274242,- | |||
|coexpression_cluster_id=C2445 | |||
|description=CAGE_peak_at_chr17:80274229..80274242,- | |description=CAGE_peak_at_chr17:80274229..80274242,- | ||
|id=chr17:80274229..80274242,- | |id=chr17:80274229..80274242,- | ||
|ontology_enrichment_celltype=CL:0000084!2.35e-24!25;CL:0000827!2.35e-24!25;CL:0000791!3.80e-21!18;CL:0000789!3.80e-21!18;CL:0002420!3.80e-21!18;CL:0002419!3.80e-21!18;CL:0000790!3.80e-21!18;CL:0000625!5.56e-15!11;CL:0000738!9.38e-15!140;CL:0000037!6.36e-13!172;CL:0000566!6.36e-13!172;CL:0002087!1.25e-12!119;CL:0000838!6.02e-12!52;CL:0000542!1.38e-11!53;CL:0000051!1.38e-11!53;CL:0000988!2.16e-11!182;CL:0002032!5.19e-11!165;CL:0000837!5.19e-11!165;CL:0002031!1.43e-10!124;CL:0000624!9.35e-07!6 | |ontology_enrichment_celltype=CL:0000084!2.35e-24!25;CL:0000827!2.35e-24!25;CL:0000791!3.80e-21!18;CL:0000789!3.80e-21!18;CL:0002420!3.80e-21!18;CL:0002419!3.80e-21!18;CL:0000790!3.80e-21!18;CL:0000625!5.56e-15!11;CL:0000738!9.38e-15!140;CL:0000037!6.36e-13!172;CL:0000566!6.36e-13!172;CL:0002087!1.25e-12!119;CL:0000838!6.02e-12!52;CL:0000542!1.38e-11!53;CL:0000051!1.38e-11!53;CL:0000988!2.16e-11!182;CL:0002032!5.19e-11!165;CL:0000837!5.19e-11!165;CL:0002031!1.43e-10!124;CL:0000624!9.35e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0000625;1.18e-30;11!CL:0000791;4.81e-26;18!CL:0000789;4.81e-26;18!CL:0002419;4.81e-26;18!CL:0000084;9.69e-25;25!CL:0000623;1.31e-11;3!CL:0000542;3.78e-07;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000625,1.02e-30,11;CL:0000791,4.31e-26,18;CL:0000789,4.31e-26,18;CL:0002420,4.31e-26,18;CL:0002419,4.31e-26,18;CL:0000790,4.31e-26,18;CL:0000084,7.98e-25,25;CL:0000827,7.98e-25,25;CL:0000838,9.74e-16,52;CL:0000542,2.32e-15,53;CL:0000051,2.32e-15,53;CL:0000623,1.01e-11,3;CL:0000825,1.01e-11,3;CL:0000037,2.56e-08,168;CL:0002087,3.26e-08,115;CL:0000738,7.38e-08,136;CL:0000988,1.37e-07,177 | |||
|ontology_enrichment_development_v019=CL:0000790;4.81e-26;18!CL:0000051;3.78e-07;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!2.89e-11!15;UBERON:0000179!2.89e-11!15;UBERON:0000463!2.89e-11!15;UBERON:0002390!5.50e-08!102;UBERON:0003061!5.50e-08!102;UBERON:0002193!8.86e-08!112 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.63e-13;15!UBERON:0000179;2.63e-13;15!UBERON:0000463;2.63e-13;15!UBERON:0002370;5.21e-08;2!UBERON:0005058;5.21e-08;2!UBERON:0009113;5.21e-08;2!UBERON:0002390;7.49e-08;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,3.79e-13,15;UBERON:0000179,3.79e-13,15;UBERON:0000463,3.79e-13,15 | |||
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| ||
|short_description=p@chr17:80274229..80274242,- | |short_description=p@chr17:80274229..80274242,- | ||
}} | }} |
Latest revision as of 23:04, 25 July 2015
Short description: | p@chr17:80274229..80274242, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:80274229..80274242, - |
Coexpression cluster: | C2445_Mesenchymal_CD4_Natural_acute_thymus_CD8_hepatocellular |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD8-positive, alpha-beta T cell | 1.02e-30 | 11 |
mature alpha-beta T cell | 4.31e-26 | 18 |
alpha-beta T cell | 4.31e-26 | 18 |
immature T cell | 4.31e-26 | 18 |
mature T cell | 4.31e-26 | 18 |
immature alpha-beta T cell | 4.31e-26 | 18 |
T cell | 7.98e-25 | 25 |
pro-T cell | 7.98e-25 | 25 |
lymphoid lineage restricted progenitor cell | 9.74e-16 | 52 |
lymphocyte | 2.32e-15 | 53 |
common lymphoid progenitor | 2.32e-15 | 53 |
natural killer cell | 1.01e-11 | 3 |
pro-NK cell | 1.01e-11 | 3 |
hematopoietic stem cell | 2.56e-08 | 168 |
nongranular leukocyte | 3.26e-08 | 115 |
leukocyte | 7.38e-08 | 136 |
hematopoietic cell | 1.37e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
blood | 3.79e-13 | 15 |
haemolymphatic fluid | 3.79e-13 | 15 |
organism substance | 3.79e-13 | 15 |