FFCP PHASE1:Hg19::chr17:79934670..79934675,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:79934670..79934675,+ | |||
|description=CAGE_peak_at_chr17:79934670..79934675,+ | |description=CAGE_peak_at_chr17:79934670..79934675,+ | ||
|id=chr17:79934670..79934675,+ | |id=chr17:79934670..79934675,+ | ||
|ontology_enrichment_celltype=CL:0002541!1.64e-08!3;CL:0000066!6.30e-08!254;CL:0000181!1.79e-07!12;CL:0000417!1.79e-07!12;CL:0000668!1.79e-07!12;CL:0000414!1.79e-07!12;CL:0000412!1.79e-07!12;CL:0000182!1.79e-07!12 | |ontology_enrichment_celltype=CL:0002541!1.64e-08!3;CL:0000066!6.30e-08!254;CL:0000181!1.79e-07!12;CL:0000417!1.79e-07!12;CL:0000668!1.79e-07!12;CL:0000414!1.79e-07!12;CL:0000412!1.79e-07!12;CL:0000182!1.79e-07!12 | ||
|ontology_enrichment_celltype_v019=CL:0002541;2.48e-30;3!CL:0002363;2.90e-12;2!CL:0000182;2.60e-08;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,2.30e-30,3;CL:0002363,3.24e-12,2;CL:0000008,3.24e-12,2;CL:0000182,2.65e-08,12 | |||
|ontology_enrichment_development_v019=CL:0000008;2.90e-12;2!UBERON:0004161;5.52e-09;11!UBERON:0009497;9.67e-08;13 | |||
|ontology_enrichment_disease=DOID:305!1.18e-19!106;DOID:0050687!3.89e-18!143;DOID:162!5.41e-12!235;DOID:14566!1.73e-11!239;DOID:3119!1.86e-07!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon_v019=UBERON:0003124;2.48e-30;3!UBERON:0000920;2.48e-30;3!UBERON:0003566;2.90e-12;2!UBERON:0001777;2.90e-12;2!UBERON:0002107;4.44e-11;19!UBERON:0006925;4.44e-11;19!UBERON:0005631;7.91e-10;10!UBERON:0000158;7.91e-10;10!UBERON:0002423;1.43e-08;25!UBERON:0002365;3.06e-07;31!UBERON:0002330;3.06e-07;31!UBERON:0003891;9.10e-07;4!UBERON:0000964;9.10e-07;4!UBERON:0010409;9.10e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,2.30e-30,3;UBERON:0003124,1.23e-13,7;UBERON:0003566,3.24e-12,2;UBERON:0001777,3.24e-12,2;UBERON:0002107,4.84e-11,19;UBERON:0006925,4.84e-11,19;UBERON:0008836,4.84e-11,19;UBERON:0008835,1.27e-09,22;UBERON:0003894,1.27e-09,22;UBERON:0009854,3.12e-09,23;UBERON:0007499,1.53e-08,25;UBERON:0009497,1.53e-08,25;UBERON:0000015,1.53e-08,25;UBERON:0002423,1.53e-08,25;UBERON:0006235,1.53e-08,25;UBERON:0004161,1.53e-08,25;UBERON:0009856,3.08e-08,26;UBERON:0005631,2.77e-07,14;UBERON:0000158,2.77e-07,14;UBERON:0002365,5.30e-07,31;UBERON:0002330,5.30e-07,31;UBERON:0003891,9.63e-07,4;UBERON:0000964,9.63e-07,4;UBERON:0010409,9.63e-07,4;UBERON:0004348,9.63e-07,4;UBERON:0005427,9.63e-07,4 | |||
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| ||
|short_description=p@chr17:79934670..79934675,+ | |short_description=p@chr17:79934670..79934675,+ | ||
}} | }} |
Latest revision as of 22:56, 25 July 2015
Short description: | p@chr17:79934670..79934675, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:79934670..79934675, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 2.30e-30 | 3 |
keratocyte | 3.24e-12 | 2 |
migratory cranial neural crest cell | 3.24e-12 | 2 |
hepatocyte | 2.65e-08 | 12 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 2.30e-30 | 3 |
chorion | 1.23e-13 | 7 |
head connective tissue | 3.24e-12 | 2 |
substantia propria of cornea | 3.24e-12 | 2 |
liver | 4.84e-11 | 19 |
digestive gland | 4.84e-11 | 19 |
liver bud | 4.84e-11 | 19 |
hepatic diverticulum | 1.27e-09 | 22 |
liver primordium | 1.27e-09 | 22 |
digestive tract diverticulum | 3.12e-09 | 23 |
epithelial sac | 1.53e-08 | 25 |
epithelium of foregut-midgut junction | 1.53e-08 | 25 |
anatomical boundary | 1.53e-08 | 25 |
hepatobiliary system | 1.53e-08 | 25 |
foregut-midgut junction | 1.53e-08 | 25 |
septum transversum | 1.53e-08 | 25 |
sac | 3.08e-08 | 26 |
extraembryonic membrane | 2.77e-07 | 14 |
membranous layer | 2.77e-07 | 14 |
exocrine gland | 5.30e-07 | 31 |
exocrine system | 5.30e-07 | 31 |
stroma | 9.63e-07 | 4 |
cornea | 9.63e-07 | 4 |
eye surface | 9.63e-07 | 4 |
optic eminence | 9.63e-07 | 4 |
corneal primordium | 9.63e-07 | 4 |