FFCP PHASE1:Hg19::chr10:97023758..97023787,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr10:97023758..97023787,-
|short_description=p@chr10:97023758..97023787,-
|description=CAGE_peak_at_chr10:97023758..97023787,-
|association_with_transcript=NA
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr10:97023758..97023787,- | |||
|description=CAGE_peak_at_chr10:97023758..97023787,- | |||
|id=chr10:97023758..97023787,- | |||
|ontology_enrichment_celltype=CL:0000066!2.64e-18!254;CL:0002321!8.02e-12!248;CL:0000220!1.36e-11!246;CL:0000223!2.19e-11!59;CL:0000076!1.23e-10!62;CL:0002076!6.52e-10!43 | |||
|ontology_enrichment_celltype_v019=CL:0002368;5.32e-11;13!CL:0002202;5.17e-10;9!CL:0002632;5.17e-10;9!CL:0002076;3.15e-08;42!CL:0002577;6.10e-08;3!CL:0002159;1.65e-07;14!CL:0002231;2.44e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,2.80e-11,42;CL:0000066,3.92e-11,253;CL:0000223,5.01e-11,58;CL:0002368,9.41e-11,13;CL:0002202,5.94e-10,9;CL:0002632,5.94e-10,9;CL:0002321,1.62e-08,250;CL:0002577,5.84e-08,3;CL:0002231,1.65e-07,3;CL:0002159,3.64e-07,14 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!3.95e-16!169;UBERON:0000925!3.95e-16!169;UBERON:0006595!3.95e-16!169;UBERON:0001007!2.36e-12!155;UBERON:0001555!2.36e-12!155;UBERON:0007026!2.36e-12!155;UBERON:0005911!7.96e-10!82;UBERON:0000077!1.10e-09!130;UBERON:0004921!1.22e-09!129;UBERON:0004185!1.22e-09!129;UBERON:0003929!5.77e-09!54;UBERON:0000490!8.01e-08!138;UBERON:0001048!1.82e-07!168;UBERON:0003914!1.84e-07!118;UBERON:0000161!3.57e-07!35;UBERON:0003104!3.83e-07!238;UBERON:0009142!3.83e-07!238;UBERON:0003102!6.01e-07!95;UBERON:0002530!7.26e-07!59;UBERON:0003101!7.95e-07!22;UBERON:0000079!7.95e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0007196;3.76e-07;15!UBERON:0001558;3.76e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,4.22e-15,160;UBERON:0000925,4.22e-15,160;UBERON:0006595,4.22e-15,160;UBERON:0005911,1.02e-10,82;UBERON:0001007,2.28e-10,145;UBERON:0001555,2.28e-10,145;UBERON:0007026,2.28e-10,145;UBERON:0005631,7.67e-09,14;UBERON:0000158,7.67e-09,14;UBERON:0004921,1.03e-08,118;UBERON:0005157,3.98e-07,47;UBERON:0007196,5.66e-07,15;UBERON:0001558,5.66e-07,15 | |||
|phase1_expression=0.363356758541113,0.856402095563933,0.422863212287913,0,0.446961094427288,0.872338524100369,10.1319951267324,0.631719873426831,0.522371256399677,0.245733936501509,0.697801167972428,1.96597234917155,1.58260186937072,0,0,0.672325146451775,1.20538905604795,0.730310090387373,0.487932798790507,0.246242116153576,0.816002764977012,0.313454721478088,0,0.136874425072884,0,0.534893840235659,0.492603536699674,0.393553906568396,0,0,0.154816123316076,1.83884244895785,1.204823675113,1.84877005083394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236482229888585,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426730222566507,0.400395987036012,0,0.661044872784862,0.954053754535364,0.569212969109448,0,0,1.32171328579026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226618685395132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,0,0,0.144846518960824,0,0,0.189069634328136,1.33037638477538,0.263504357079378,0.261958150995425,1.09288586487763,1.11235332835329,0,0,0,0,0,0,0.596287222100115,0,0.347140501607594,0.56530794192401,2.09749718104953,1.10047216776027,0.626984899610432,0,0,0,2.81980521976403,0.760272105718513,3.1728067481262,0,0,0.714397826272638,0.673588117878509,0.450445921933289,0,0.949265659568129,0.732806975721629,0,0,0.872188104285069,0.496971951695318,0.759783069987479,0,0.573673241497627,0,0.560677600142307,2.1349799145941,1.72667283892012,0.933633106199299,0.538842688278752,0.653847612453835,1.21085942115945,0,0,0.936480230490962,1.71141546463335,0.448346041655403,0,0.485618833104395,0,0,0.122834317311768,0.309977343527296,2.37600571456411,2.47266929278557,0,0.718618141816238,0,0.125118519871964,0,0,1.83892677479412,0.150238058906597,0.680593098960126,0.179389635688862,0.427114777637135,0.635795703478686,0.300091096084402,0.309157587715317,0,0.37223371266318,0,0,0,0.460249493211497,0.161646056818812,0,0.10075209822764,0,0.966304265816484,0.818238361772504,0.860413786167011,0.609868530647977,0.132529768321485,0.232387885739037,0.414644220061482,1.26160425437814,1.09493207722749,0,1.28648187638577,0,0.464367928031979,0.721879481669586,0.118306800039844,0.168584690078102,0,0.661763836394364,0.217879444092406,0.474541238222193,0.269662616320329,0.392442930250692,0.769494313892781,2.21446636387394,1.40241773803446,0.4115740113314,1.47008711385542,0,0,1.18157981336281,0,0.491953754172454,0,1.20725313949488,1.1240175325762,0.603173834469785,0.277765335475589,0,0,1.44331342025273,0,0.234817388471643,1.73239737313289,1.38895653772983,1.33177906564219,0,0,0,0,0,1.87467667973554,2.01578553838631,0.850650583454319,0.268675568108545,0.290633938513962,0.766765358330422,0,0,0,0.144119953416961,0,0.126995788584338,0.763976851116555,1.17217447210047,0,0.205654985406647,0.300343057843917,0,0,0.87192013766656,0,0.129271715757778,0,0.845302752556,1.59562869950922,0,0,0,0,1.42977993658148,0.542621605391443,0,0,2.48774364119782,0.791951872933429,0.602878754119172,0,0.699810938274399,0,0,0,0,0,0,0,0.205476322550383,0.179060963239896,0,0,0,0,0,0,0,0,0,0.749007023947182,0,0,0.12269149171914,0.500170521059677,0.271265023699736,0.415941723061614,0.535286966391485,0.157702415033935,0.117141414992713,0.601892199455438,0,0,0,0,0.0868836144680828,0.587403472388222,0.686286847621712,0,0,0.106727557803444,3.63753085735511,4.99306318531491,4.83824469327489,0.248107807818777,0.153461973288062,0.561320188866147,0.256278298511402,0,0,0,0.154209693802656,0,0.328508624055237,0,0.348631135379878,3.50492403815704,7.21823293091825,1.65745780084613,0.918515585316854,0.728364672026868,4.85160335349869,0.451199612907412,0.0770153371044148,0.784349769176855,0,0.211103257785751,0,0.170093705276516,0.431831832204279,0,0.270946437543853,0,0,0,0.447749509444357,0,0,0,0.328014645699706,0,0.515205058238611,0.183138929636687,0.082509499920588,1.14853107599234,1.30012049207304,0,0,0.154048617114644,0,0.137836572484531,0.107420244868274,0.290033387828457,0.0852266274161009,0.178064071293475,3.14041339185858,0.576570202095319,0.127612712494584,1.0115778085555,0.464845549297286,0,0,0,0,0,0,0.143124886741991,0.372158369359667,0,0.953150969619124,0.255897791311334,0.855877976067841,0,1.56989728039846,0.179872457583315,1.37268514868027,0,0.202182481573316,0,0,0.48763373908959,0.243713489631284,0,0.818999468447914,2.82810863907426,0,0,0.66343897524122,0,0,0.655894752046633,0.202910376962704,0,0.845086807596724,0,0,0.35667105148125,0,0,0.329294892959902,0,1.04980416073495,0.192444225451024,2.68120910214315,1.08890984861323,0.376575203107117,1.29151611801369,1.68471475667626,2.66058092122005,0.229723400206959,0,0,0.569647187174163,0,0,0,0,0,0,0,1.96032172784825,0.557409525377156,0.577076851905779,0,0.318852545457645,0,0,0,0,0,0,0,0,0,0,1.00899853595524,0,0,0,0,0,0,0,0,0.540911356951966,0.66614393599564,0,0.18714054040822,0.73254089635947,0,0,3.69376990848337,0.47748896947538,3.26661148915902,0.307160702099232,0,0,0.333926115068718,0,0,1.19548792950642,0,0,0.613612095012929,0.123084805461069,0.933118762985422,0.179736702294654,0,0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| ||
|short_description=p@chr10:97023758..97023787,- | |||
}} | }} |
Latest revision as of 16:58, 23 July 2015
Short description: | p@chr10:97023758..97023787, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:97023758..97023787, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 2.80e-11 | 42 |
epithelial cell | 3.92e-11 | 253 |
endodermal cell | 5.01e-11 | 58 |
respiratory epithelial cell | 9.41e-11 | 13 |
epithelial cell of tracheobronchial tree | 5.94e-10 | 9 |
epithelial cell of lower respiratory tract | 5.94e-10 | 9 |
embryonic cell | 1.62e-08 | 250 |
placental epithelial cell | 5.84e-08 | 3 |
epithelial cell of prostate | 1.65e-07 | 3 |
general ecto-epithelial cell | 3.64e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 4.22e-15 | 160 |
endoderm | 4.22e-15 | 160 |
presumptive endoderm | 4.22e-15 | 160 |
endo-epithelium | 1.02e-10 | 82 |
digestive system | 2.28e-10 | 145 |
digestive tract | 2.28e-10 | 145 |
primitive gut | 2.28e-10 | 145 |
extraembryonic membrane | 7.67e-09 | 14 |
membranous layer | 7.67e-09 | 14 |
subdivision of digestive tract | 1.03e-08 | 118 |
epithelial fold | 3.98e-07 | 47 |
tracheobronchial tree | 5.66e-07 | 15 |
lower respiratory tract | 5.66e-07 | 15 |