FFCP PHASE1:Hg19::chr12:54071246..54071256,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=517 | |EntrezGene=517 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=842 | |HGNC=842 | ||
|TSSclassifier=strong | |||
|UniProt=F8VXQ8 | |UniProt=F8VXQ8 | ||
|association_with_transcript=-54bp_to_ENST00000552242_5end | |association_with_transcript=-54bp_to_ENST00000552242_5end | ||
|cluster_id=chr12:54071246..54071256,- | |||
|coexpression_cluster_id=C63 | |||
|description=CAGE_peak_16_at_ATP5G2_5end | |description=CAGE_peak_16_at_ATP5G2_5end | ||
|id=chr12:54071246..54071256,- | |id=chr12:54071246..54071256,- | ||
|ontology_enrichment_celltype=CL:0002322!1.65e-16!5 | |ontology_enrichment_celltype=CL:0002322!1.65e-16!5 | ||
|ontology_enrichment_celltype_v019=CL:0000540;3.97e-14;6!CL:0000404;3.97e-14;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,3.71e-14,6;CL:0000031,3.71e-14,6;CL:0000404,3.71e-14,6;CL:0000047,7.30e-11,8 | |||
|ontology_enrichment_development_v019=CL:0000031;3.97e-14;6!UBERON:0006215;6.78e-08;3 | |||
|ontology_enrichment_disease=DOID:3095!6.12e-08!22;DOID:2994!6.12e-08!22 | |ontology_enrichment_disease=DOID:3095!6.12e-08!22;DOID:2994!6.12e-08!22 | ||
|ontology_enrichment_disease_v019=DOID:171;1.13e-18;10!DOID:3095;6.91e-15;22!DOID:2994;6.91e-15;22 | |||
|ontology_enrichment_disease_v019_2=DOID:171,1.01e-18,10;DOID:3095,6.43e-15,22;DOID:2994,6.43e-15,22 | |||
|ontology_enrichment_uberon=UBERON:0001017!3.14e-17!82;UBERON:0005743!3.85e-16!86;UBERON:0000073!1.74e-15!94;UBERON:0001016!1.74e-15!94;UBERON:0007023!9.08e-14!115;UBERON:0001049!2.00e-13!57;UBERON:0005068!2.00e-13!57;UBERON:0006241!2.00e-13!57;UBERON:0007135!2.00e-13!57;UBERON:0000955!2.05e-11!69;UBERON:0006238!2.05e-11!69;UBERON:0002346!2.08e-11!90;UBERON:0002616!2.57e-11!59;UBERON:0002619!1.58e-10!22;UBERON:0001896!1.15e-09!3;UBERON:0005290!1.15e-09!3;UBERON:0010096!1.15e-09!3;UBERON:0003075!1.34e-09!86;UBERON:0007284!1.34e-09!86;UBERON:0001950!1.86e-09!20;UBERON:0000956!4.32e-09!25;UBERON:0000203!4.32e-09!25;UBERON:0003076!5.24e-09!15;UBERON:0003057!5.24e-09!15;UBERON:0000924!1.28e-08!173;UBERON:0006601!1.28e-08!173;UBERON:0002791!7.02e-08!33;UBERON:0001893!1.36e-07!34;UBERON:0004121!2.45e-07!169;UBERON:0002780!2.64e-07!41;UBERON:0001890!2.64e-07!41;UBERON:0006240!2.64e-07!41;UBERON:0003080!4.44e-07!42;UBERON:0001869!9.09e-07!32 | |ontology_enrichment_uberon=UBERON:0001017!3.14e-17!82;UBERON:0005743!3.85e-16!86;UBERON:0000073!1.74e-15!94;UBERON:0001016!1.74e-15!94;UBERON:0007023!9.08e-14!115;UBERON:0001049!2.00e-13!57;UBERON:0005068!2.00e-13!57;UBERON:0006241!2.00e-13!57;UBERON:0007135!2.00e-13!57;UBERON:0000955!2.05e-11!69;UBERON:0006238!2.05e-11!69;UBERON:0002346!2.08e-11!90;UBERON:0002616!2.57e-11!59;UBERON:0002619!1.58e-10!22;UBERON:0001896!1.15e-09!3;UBERON:0005290!1.15e-09!3;UBERON:0010096!1.15e-09!3;UBERON:0003075!1.34e-09!86;UBERON:0007284!1.34e-09!86;UBERON:0001950!1.86e-09!20;UBERON:0000956!4.32e-09!25;UBERON:0000203!4.32e-09!25;UBERON:0003076!5.24e-09!15;UBERON:0003057!5.24e-09!15;UBERON:0000924!1.28e-08!173;UBERON:0006601!1.28e-08!173;UBERON:0002791!7.02e-08!33;UBERON:0001893!1.36e-07!34;UBERON:0004121!2.45e-07!169;UBERON:0002780!2.64e-07!41;UBERON:0001890!2.64e-07!41;UBERON:0006240!2.64e-07!41;UBERON:0003080!4.44e-07!42;UBERON:0001869!9.09e-07!32 | ||
|ontology_enrichment_uberon_v019=UBERON:0002346;3.82e-21;4!UBERON:0000923;3.82e-21;4!UBERON:0010316;3.82e-21;4!UBERON:0005291;3.82e-21;4!UBERON:0002050;3.95e-17;5!UBERON:0005423;3.95e-17;5 | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920498986422993,0,0,0,0,0,0,0,0.487894824518382,0.397589304964456,1.16193942869518,0.829288440122964,0.756962552626885,2.55484151353081,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03473071292505,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.979352392114111,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,1.52581736317083,0,0,0.219385397153973,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216388639742091,0,0.0884575645033392,0,0,0,0,0.067401132980677,0,0.702793337176017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173559738335131,0,0,0,0,0,0,0,0.0969890164884194,0.0882561266915003,0.225980740780532,0,0,0.126621591911757,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0.803765742325096,1.10031549277787,1.66176135211674,0,0,0.121499113316049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.573409195690071,0.110929051536852,0.18628920882415,0.276697269872462,0,0,0,0,0,0,0,0,0,0,0,0,0.228840068396924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.57265941855896,0,0,4.03892348193197,6.69253126998612,0,0,0,0,0,0,0,0,0,0.205116364240755,0.252071696221718,0.0691572524642179,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206686796501184,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0.131545547125698,0,0,0.156986185701028,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307988420568741,0,0,0.233939463462106,0.198950775161368,0,0,0.109940516745429,0.150962843566674,0,0,0,0,0,0.196308467114945,0,0.4226557275834,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0.135982980381829,0.436350690340377,0,0,0,0,0.126166424835079,0,0.126698501011437,0.305966489225945,0,0.18378979906969,1.25353769646188,0,0.267964130156178,0,0,0,0.23806443146374,0,0,0,0,0,0.217716747896961,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920498986422993,0,0,0,0,0,0,0,0.487894824518382,0.397589304964456,1.16193942869518,0.829288440122964,0.756962552626885,2.55484151353081,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03473071292505,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.979352392114111,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,1.52581736317083,0,0,0.219385397153973,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216388639742091,0,0.0884575645033392,0,0,0,0,0.067401132980677,0,0.702793337176017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173559738335131,0,0,0,0,0,0,0,0.0969890164884194,0.0882561266915003,0.225980740780532,0,0,0.126621591911757,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0.803765742325096,1.10031549277787,1.66176135211674,0,0,0.121499113316049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.573409195690071,0.110929051536852,0.18628920882415,0.276697269872462,0,0,0,0,0,0,0,0,0,0,0,0,0.228840068396924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.57265941855896,0,0,4.03892348193197,6.69253126998612,0,0,0,0,0,0,0,0,0,0.205116364240755,0.252071696221718,0.0691572524642179,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206686796501184,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0.131545547125698,0,0,0.156986185701028,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307988420568741,0,0,0.233939463462106,0.198950775161368,0,0,0.109940516745429,0.150962843566674,0,0,0,0,0,0.196308467114945,0,0.4226557275834,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0.135982980381829,0.436350690340377,0,0,0,0,0.126166424835079,0,0.126698501011437,0.305966489225945,0,0.18378979906969,1.25353769646188,0,0.267964130156178,0,0,0,0.23806443146374,0,0,0,0,0,0.217716747896961,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p16@ATP5G2 | |short_description=p16@ATP5G2 | ||
}} | }} |
Latest revision as of 03:50, 19 September 2015
Short description: | p16@ATP5G2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_16_at_ATP5G2_5end |
Coexpression cluster: | C63_neuroectodermal_neuroblastoma_carcinoid_peripheral_chronic_neuroepithelioma_acute |
Association with transcript: | -54bp_to_ENST00000552242_5end |
EntrezGene: | ATP5G2 |
HGNC: | 842 |
UniProt: | F8VXQ8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 3.71e-14 | 6 |
neuroblast | 3.71e-14 | 6 |
electrically signaling cell | 3.71e-14 | 6 |
neuronal stem cell | 7.30e-11 | 8 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 1.01e-18 | 10 |
germ cell and embryonal cancer | 6.43e-15 | 22 |
germ cell cancer | 6.43e-15 | 22 |