FFCP PHASE1:Hg19::chr12:53835383..53835399,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54458 | |EntrezGene=54458 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24528 | |HGNC=24528 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NZ81 | |UniProt=Q9NZ81 | ||
|association_with_transcript=0bp_to_ENST00000429243_5end | |association_with_transcript=0bp_to_ENST00000429243_5end | ||
|cluster_id=chr12:53835383..53835399,+ | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_5_at_PRR13_5end | |description=CAGE_peak_5_at_PRR13_5end | ||
|id=chr12:53835383..53835399,+ | |id=chr12:53835383..53835399,+ | ||
|ontology_enrichment_celltype=CL:0002057!6.80e-18!42;CL:0000860!8.08e-16!45;CL:0000766!3.52e-14!76;CL:0002009!1.92e-13!65;CL:0000763!2.27e-13!112;CL:0000049!2.27e-13!112;CL:0002194!3.35e-13!63;CL:0000576!3.35e-13!63;CL:0000040!3.35e-13!63;CL:0000559!3.35e-13!63;CL:0000557!4.05e-10!71;CL:0000839!1.20e-09!70;CL:0000988!1.69e-07!182;CL:0000037!1.82e-07!172;CL:0000566!1.82e-07!172;CL:0000738!3.19e-07!140;CL:0002032!5.58e-07!165;CL:0000837!5.58e-07!165 | |ontology_enrichment_celltype=CL:0002057!6.80e-18!42;CL:0000860!8.08e-16!45;CL:0000766!3.52e-14!76;CL:0002009!1.92e-13!65;CL:0000763!2.27e-13!112;CL:0000049!2.27e-13!112;CL:0002194!3.35e-13!63;CL:0000576!3.35e-13!63;CL:0000040!3.35e-13!63;CL:0000559!3.35e-13!63;CL:0000557!4.05e-10!71;CL:0000839!1.20e-09!70;CL:0000988!1.69e-07!182;CL:0000037!1.82e-07!172;CL:0000566!1.82e-07!172;CL:0000738!3.19e-07!140;CL:0002032!5.58e-07!165;CL:0000837!5.58e-07!165 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.78e-14;33!CL:0002057;2.78e-14;33!CL:0000576;2.94e-13;48!CL:0000473;8.03e-11;39!CL:0000234;8.03e-11;39!CL:0000094;1.39e-10;8!CL:0000766;8.73e-10;69!CL:0000081;5.05e-09;11!CL:0000763;2.42e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,2.44e-21,72;CL:0000860,4.03e-21,42;CL:0002057,4.03e-21,42;CL:0000763,5.71e-19,108;CL:0000049,5.71e-19,108;CL:0000473,1.46e-18,48;CL:0000234,1.46e-18,48;CL:0002194,7.44e-17,59;CL:0000576,7.44e-17,59;CL:0000040,7.44e-17,59;CL:0000559,7.44e-17,59;CL:0002009,6.37e-16,61;CL:0000988,2.79e-14,177;CL:0000037,5.25e-14,168;CL:0000839,7.43e-14,66;CL:0002032,1.30e-13,161;CL:0000837,1.30e-13,161;CL:0000738,1.70e-13,136;CL:0000557,1.76e-13,67;CL:0002320,1.58e-11,361;CL:0000134,8.21e-11,354;CL:0000094,1.14e-10,8;CL:0002087,2.51e-10,115;CL:0000081,4.34e-09,11;CL:0000219,2.63e-08,386;CL:0002031,2.76e-08,120;CL:0000048,5.78e-08,427;CL:0000723,1.79e-07,433;CL:0000034,3.83e-07,441 | |||
|ontology_enrichment_development_v019=CL:0002057;6.24e-15;42!CL:0000049;1.02e-07;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!5.38e-14!102;UBERON:0003061!5.38e-14!102;UBERON:0004765!1.86e-11!101;UBERON:0001434!1.86e-11!101;UBERON:0002193!2.57e-11!112;UBERON:0001474!3.59e-10!86;UBERON:0003081!6.00e-10!216;UBERON:0002371!8.24e-10!80;UBERON:0002204!1.80e-08!167;UBERON:0000926!1.95e-08!448;UBERON:0004120!1.95e-08!448;UBERON:0006603!1.95e-08!448 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.21e-09;15!UBERON:0000179;2.21e-09;15!UBERON:0000463;2.21e-09;15!UBERON:0002390;3.93e-09;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.16e-23,98;UBERON:0003061,3.16e-23,98;UBERON:0002193,2.18e-19,108;UBERON:0001434,7.56e-17,100;UBERON:0003081,2.35e-15,203;UBERON:0001474,7.61e-15,82;UBERON:0002371,2.57e-14,76;UBERON:0004765,3.40e-14,90;UBERON:0002405,7.06e-13,93;UBERON:0002384,6.58e-11,371;UBERON:0000178,2.88e-09,15;UBERON:0000179,2.88e-09,15;UBERON:0000463,2.88e-09,15;UBERON:0002204,1.53e-08,167 | |||
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| ||
|short_description=p5@PRR13 | |short_description=p5@PRR13 | ||
}} | }} |
Latest revision as of 03:01, 19 September 2015
Short description: | p5@PRR13 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_PRR13_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 0bp_to_ENST00000429243_5end |
EntrezGene: | PRR13 |
HGNC: | 24528 |
UniProt: | Q9NZ81 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 2.44e-21 | 72 |
classical monocyte | 4.03e-21 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.03e-21 | 42 |
myeloid cell | 5.71e-19 | 108 |
common myeloid progenitor | 5.71e-19 | 108 |
defensive cell | 1.46e-18 | 48 |
phagocyte | 1.46e-18 | 48 |
monopoietic cell | 7.44e-17 | 59 |
monocyte | 7.44e-17 | 59 |
monoblast | 7.44e-17 | 59 |
promonocyte | 7.44e-17 | 59 |
macrophage dendritic cell progenitor | 6.37e-16 | 61 |
hematopoietic cell | 2.79e-14 | 177 |
hematopoietic stem cell | 5.25e-14 | 168 |
myeloid lineage restricted progenitor cell | 7.43e-14 | 66 |
hematopoietic oligopotent progenitor cell | 1.30e-13 | 161 |
hematopoietic multipotent progenitor cell | 1.30e-13 | 161 |
leukocyte | 1.70e-13 | 136 |
granulocyte monocyte progenitor cell | 1.76e-13 | 67 |
connective tissue cell | 1.58e-11 | 361 |
mesenchymal cell | 8.21e-11 | 354 |
granulocyte | 1.14e-10 | 8 |
nongranular leukocyte | 2.51e-10 | 115 |
blood cell | 4.34e-09 | 11 |
motile cell | 2.63e-08 | 386 |
hematopoietic lineage restricted progenitor cell | 2.76e-08 | 120 |
multi fate stem cell | 5.78e-08 | 427 |
somatic stem cell | 1.79e-07 | 433 |
stem cell | 3.83e-07 | 441 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.16e-23 | 98 |
blood island | 3.16e-23 | 98 |
hemolymphoid system | 2.18e-19 | 108 |
skeletal system | 7.56e-17 | 100 |
lateral plate mesoderm | 2.35e-15 | 203 |
bone element | 7.61e-15 | 82 |
bone marrow | 2.57e-14 | 76 |
skeletal element | 3.40e-14 | 90 |
immune system | 7.06e-13 | 93 |
connective tissue | 6.58e-11 | 371 |
blood | 2.88e-09 | 15 |
haemolymphatic fluid | 2.88e-09 | 15 |
organism substance | 2.88e-09 | 15 |
musculoskeletal system | 1.53e-08 | 167 |