FFCP PHASE1:Hg19::chr12:52828147..52828164,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9119 | |EntrezGene=9119 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24431 | |HGNC=24431 | ||
|TSSclassifier=strong | |||
|UniProt=O95678 | |UniProt=O95678 | ||
|association_with_transcript=-37bp_to_NM_004693,uc001saj.2_5end | |association_with_transcript=-37bp_to_NM_004693,uc001saj.2_5end | ||
|cluster_id=chr12:52828147..52828164,- | |||
|coexpression_cluster_id=C405 | |||
|description=CAGE_peak_1_at_KRT75_5end | |description=CAGE_peak_1_at_KRT75_5end | ||
|id=chr12:52828147..52828164,- | |id=chr12:52828147..52828164,- | ||
|ontology_enrichment_celltype=CL:0002076!1.49e-22!43;CL:0002159!1.55e-14!13;CL:0000223!2.80e-14!59;CL:0002368!4.38e-13!13;CL:0002251!3.58e-12!21;CL:0000221!3.62e-11!71;CL:0000066!6.97e-11!254;CL:0000622!1.12e-10!5;CL:0000220!2.62e-10!246;CL:0002321!4.17e-10!248;CL:0002077!1.14e-09!33;CL:0000154!8.80e-09!6;CL:0002166!2.94e-07!3;CL:0002621!3.24e-07!3;CL:0002202!3.51e-07!9;CL:0002632!3.51e-07!9;CL:0002623!6.78e-07!3 | |ontology_enrichment_celltype=CL:0002076!1.49e-22!43;CL:0002159!1.55e-14!13;CL:0000223!2.80e-14!59;CL:0002368!4.38e-13!13;CL:0002251!3.58e-12!21;CL:0000221!3.62e-11!71;CL:0000066!6.97e-11!254;CL:0000622!1.12e-10!5;CL:0000220!2.62e-10!246;CL:0002321!4.17e-10!248;CL:0002077!1.14e-09!33;CL:0000154!8.80e-09!6;CL:0002166!2.94e-07!3;CL:0002621!3.24e-07!3;CL:0002202!3.51e-07!9;CL:0002632!3.51e-07!9;CL:0002623!6.78e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0002159;2.89e-22;14!CL:0002076;2.67e-20;42!CL:0002368;5.10e-18;13!CL:0000622;7.06e-17;5!CL:0000154;5.34e-14;6!CL:0002251;1.71e-11;20!CL:0002077;2.62e-11;34!CL:0002166;3.91e-11;3!CL:0002621;4.69e-11;3!CL:0002623;1.53e-10;3!CL:0000307;6.00e-10;3!CL:0000362;2.39e-09;9!CL:0000150;3.43e-09;9!CL:0000240;7.28e-09;6!CL:0000311;7.28e-09;6!CL:0000079;7.28e-09;6!CL:0000237;7.28e-09;6!CL:0002202;1.24e-08;9!CL:0002632;1.24e-08;9!CL:0000317;4.79e-08;2!CL:1000448;4.79e-08;2!CL:0002308;4.79e-08;2!CL:0002140;4.79e-08;2!CL:0000575;3.23e-07;2!CL:0000244;5.66e-07;4!CL:0000731;5.66e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,3.83e-25,42;CL:0002159,2.71e-22,14;CL:0002368,5.55e-18,13;CL:0000622,7.31e-17,5;CL:0000223,9.56e-17,58;CL:0000154,5.50e-14,6;CL:0000221,1.96e-13,72;CL:0002077,2.16e-13,34;CL:0000066,1.34e-12,253;CL:0002251,1.89e-11,20;CL:0002166,3.92e-11,3;CL:0002621,4.62e-11,3;CL:0002321,6.11e-11,250;CL:0002623,1.58e-10,3;CL:0000068,6.70e-10,3;CL:0000069,6.70e-10,3;CL:0000307,6.70e-10,3;CL:0000377,6.70e-10,3;CL:0000362,2.39e-09,9;CL:0000150,3.49e-09,9;CL:0000240,8.58e-09,6;CL:0000311,8.58e-09,6;CL:0000079,8.58e-09,6;CL:0000237,8.58e-09,6;CL:0000036,8.58e-09,6;CL:0000357,8.58e-09,6;CL:0000114,8.58e-09,6;CL:0002202,1.31e-08,9;CL:0002632,1.31e-08,9;CL:0000317,4.79e-08,2;CL:1000448,4.79e-08,2;CL:0002308,4.79e-08,2;CL:0002140,4.79e-08,2;CL:0000575,2.94e-07,2;CL:0000244,3.74e-07,4;CL:0000731,3.74e-07,4 | |||
|ontology_enrichment_development_v019=CL:0000377;6.00e-10;3!CL:0000357;7.28e-09;6!CL:0000114;7.28e-09;6!CL:0000223;8.08e-09;58 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001004!1.20e-14!72;UBERON:0000166!4.80e-12!21;UBERON:0000165!4.32e-11!28;UBERON:0000930!4.32e-11!28;UBERON:0000161!5.62e-11!35;UBERON:0003102!2.09e-09!95;UBERON:0004119!8.45e-08!169;UBERON:0000925!8.45e-08!169;UBERON:0006595!8.45e-08!169;UBERON:0001444!1.28e-07!48;UBERON:0000065!1.70e-07!53;UBERON:0001949!3.24e-07!3;UBERON:0000924!3.61e-07!173;UBERON:0006601!3.61e-07!173;UBERON:0004121!4.85e-07!169 | |ontology_enrichment_uberon=UBERON:0001004!1.20e-14!72;UBERON:0000166!4.80e-12!21;UBERON:0000165!4.32e-11!28;UBERON:0000930!4.32e-11!28;UBERON:0000161!5.62e-11!35;UBERON:0003102!2.09e-09!95;UBERON:0004119!8.45e-08!169;UBERON:0000925!8.45e-08!169;UBERON:0006595!8.45e-08!169;UBERON:0001444!1.28e-07!48;UBERON:0000065!1.70e-07!53;UBERON:0001949!3.24e-07!3;UBERON:0000924!3.61e-07!173;UBERON:0006601!3.61e-07!173;UBERON:0004121!4.85e-07!169 | ||
|ontology_enrichment_uberon_v019=UBERON:0001949;4.69e-11;3!UBERON:0000161;1.36e-09;19!UBERON:0000166;1.36e-09;19!UBERON:0000165;2.16e-09;28!UBERON:0000486;7.22e-09;12!UBERON:0001708;1.96e-08;4!UBERON:0008895;1.96e-08;4!UBERON:0003729;3.94e-08;13!UBERON:0002419;4.79e-08;2!UBERON:0007771;4.79e-08;2!UBERON:0003297;4.79e-08;2!UBERON:0001821;4.79e-08;2!UBERON:0003487;4.79e-08;2!UBERON:0001820;4.79e-08;2!UBERON:0001003;1.31e-07;15!UBERON:0007376;1.31e-07;15!UBERON:0010371;3.10e-07;31!UBERON:0011159;8.34e-07;5!UBERON:0001828;9.71e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001004,2.99e-16,74;UBERON:0003102,2.66e-15,99;UBERON:0001949,4.62e-11,3;UBERON:0000153,1.52e-10,62;UBERON:0007811,1.52e-10,62;UBERON:0000161,3.17e-10,36;UBERON:0000166,3.19e-10,22;UBERON:0004119,1.20e-09,160;UBERON:0000925,1.20e-09,160;UBERON:0006595,1.20e-09,160;UBERON:0000033,2.64e-09,56;UBERON:0000165,5.94e-09,29;UBERON:0000930,5.94e-09,29;UBERON:0001708,1.97e-08,4;UBERON:0008895,1.97e-08,4;UBERON:0003729,4.48e-08,13;UBERON:0002419,4.79e-08,2;UBERON:0007771,4.79e-08,2;UBERON:0003297,4.79e-08,2;UBERON:0001821,4.79e-08,2;UBERON:0003487,4.79e-08,2;UBERON:0001820,4.79e-08,2;UBERON:0005089,4.79e-08,2;UBERON:0005088,4.79e-08,2;UBERON:0000065,6.34e-08,54;UBERON:0001003,1.31e-07,15;UBERON:0007376,1.31e-07,15;UBERON:0007383,1.31e-07,15;UBERON:0003408,1.45e-07,10;UBERON:0004807,1.51e-07,28;UBERON:0011159,8.35e-07,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738726348460727,0,0.940364164434263,1.71741592278634,0.821246550437305,1.63205431473244,0,0,0,0,0,0,11.0330546937471,13.5542663450213,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,0.724232594804119,0,0,0,0,0.087834785693126,0.0654895377488563,7.65020105414339,2.59549109949101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,19.1881382942715,0,0,0,0,1.06400514659507,0,0,0,0,0,0,0,0,0,0,1.1409436430889,0,0,0,0,0,0,0,1.18800285728205,0,0,0,0,0,0,0,0,0.600952235626387,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,84.648253685524,114.28062452756,77.150436159642,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2123.22902151527,96.6655078015528,4.82539067575828,1.01847289674383,0,0,0,0,0,0,0,0,0,0,0,0,0,298.073592077951,44.8512282290955,151.982904243838,0.0895585227028483,2.90633938513962,14.1851591291128,0,0,0,0.144119953416961,0.12624243342638,0,0,0,1.71072446022705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01637849688985,0,2.31986643833309,3.51784157202132,1.27587750330633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,84.0122110570764,2.4861867012692,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,137.823729119081,287.976688994179,0,0,0.924291702687866,1.22802939780904,0,0,0,0.170453254832202,0,5.45440220691228,5.76570202095319,3.44554323735377,2.2254711788221,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.6196469961995,0,0,0,0,0,0.844430541190656,0.329294892959902,0,0,2.30933070541229,2.01090682660736,9.80018863751903,0,1.29151611801369,1.68471475667626,1.7737206141467,0,0,0,0,0,0,0,0,0,1.06824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.7117687738877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.910347586283997,0,0,0,0,0,0,0,0,0,0,0,0,42.2453945164168,0.230850775511391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.60515529459758,0,0,0,0,0,0,0,0.063186579628488,7.66649439013912,0.103688191397247,0,0,0,0,0,0.138674673013139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0801588202515337,0,0.39961921916426,0,0,0,0,0,0,0,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,40.9230318871105,0,0,0,0,0,0,0,0.76280561296425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27668251554036,0,0,0,0,0,0,0,0,0,0,0,0,340.071690064892,0,0.285465333544967,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.38582807654183,0,0,0,0,0,0,0,1.30852315404675,0.327609848846413,0.245772908753719,0,0,0,0,0,0,6.85409587825278,3.11038630016486,0,0,0,0,0,0,0.371807292777007,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196295437002051,0.11796972334774,1.28400018965175,0,0,0,0,0,2.21875575573872,0,0,0,0,0,0,0.206686796501184,0,0,0,0.496211178389294,0,0.766574565837572,0,0,0,0,0,0,0,0,0,0,10.3445203759624,0.078493092850514,0,0,0,0.215927591218621,0,0,0,0,0,0,5.38762026823896,50.3619507427152,17.2814915453523,0,0,0,0,0,0,0,0,0,0,0,0,0,76.2566259102849,0,0,0,1.01651473835064,0,22.0405751607343,0,0,0,0,0,0,0,0,0,0,0,0,0.357107877211315,0,0,0,0,0,0,0,0,0,0,0.924351257262837,0,0,0,0,0,0,0.275684698604535,0,0,0,0.829169439458779,0,0,0,1.16260037704811,1.42771842880473,0,0,0,7.62008617639365,0.684466602170562,0.134704106029175,0,0.332660356546013,0,0.106727345877715,0,0,7.03922827210363,0.122241444182866,0,0,0.603821380773079,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738726348460727,0,0.940364164434263,1.71741592278634,0.821246550437305,1.63205431473244,0,0,0,0,0,0,11.0330546937471,13.5542663450213,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,0.724232594804119,0,0,0,0,0.087834785693126,0.0654895377488563,7.65020105414339,2.59549109949101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,19.1881382942715,0,0,0,0,1.06400514659507,0,0,0,0,0,0,0,0,0,0,1.1409436430889,0,0,0,0,0,0,0,1.18800285728205,0,0,0,0,0,0,0,0,0.600952235626387,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,84.648253685524,114.28062452756,77.150436159642,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2123.22902151527,96.6655078015528,4.82539067575828,1.01847289674383,0,0,0,0,0,0,0,0,0,0,0,0,0,298.073592077951,44.8512282290955,151.982904243838,0.0895585227028483,2.90633938513962,14.1851591291128,0,0,0,0.144119953416961,0.12624243342638,0,0,0,1.71072446022705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01637849688985,0,2.31986643833309,3.51784157202132,1.27587750330633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,84.0122110570764,2.4861867012692,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,137.823729119081,287.976688994179,0,0,0.924291702687866,1.22802939780904,0,0,0,0.170453254832202,0,5.45440220691228,5.76570202095319,3.44554323735377,2.2254711788221,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.6196469961995,0,0,0,0,0,0.844430541190656,0.329294892959902,0,0,2.30933070541229,2.01090682660736,9.80018863751903,0,1.29151611801369,1.68471475667626,1.7737206141467,0,0,0,0,0,0,0,0,0,1.06824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.7117687738877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.910347586283997,0,0,0,0,0,0,0,0,0,0,0,0,42.2453945164168,0.230850775511391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.60515529459758,0,0,0,0,0,0,0,0.063186579628488,7.66649439013912,0.103688191397247,0,0,0,0,0,0.138674673013139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0801588202515337,0,0.39961921916426,0,0,0,0,0,0,0,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,40.9230318871105,0,0,0,0,0,0,0,0.76280561296425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27668251554036,0,0,0,0,0,0,0,0,0,0,0,0,340.071690064892,0,0.285465333544967,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.38582807654183,0,0,0,0,0,0,0,1.30852315404675,0.327609848846413,0.245772908753719,0,0,0,0,0,0,6.85409587825278,3.11038630016486,0,0,0,0,0,0,0.371807292777007,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196295437002051,0.11796972334774,1.28400018965175,0,0,0,0,0,2.21875575573872,0,0,0,0,0,0,0.206686796501184,0,0,0,0.496211178389294,0,0.766574565837572,0,0,0,0,0,0,0,0,0,0,10.3445203759624,0.078493092850514,0,0,0,0.215927591218621,0,0,0,0,0,0,5.38762026823896,50.3619507427152,17.2814915453523,0,0,0,0,0,0,0,0,0,0,0,0,0,76.2566259102849,0,0,0,1.01651473835064,0,22.0405751607343,0,0,0,0,0,0,0,0,0,0,0,0,0.357107877211315,0,0,0,0,0,0,0,0,0,0,0.924351257262837,0,0,0,0,0,0,0.275684698604535,0,0,0,0.829169439458779,0,0,0,1.16260037704811,1.42771842880473,0,0,0,7.62008617639365,0.684466602170562,0.134704106029175,0,0.332660356546013,0,0.106727345877715,0,0,7.03922827210363,0.122241444182866,0,0,0.603821380773079,0 | ||
|short_description=p1@KRT75 | |short_description=p1@KRT75 | ||
}} | }} |
Latest revision as of 22:33, 18 September 2015
Short description: | p1@KRT75 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_KRT75_5end |
Coexpression cluster: | C405_Keratinocyte_Mammary_Sebocyte_tongue_Corneal_Mallassezderived_Gingival |
Association with transcript: | -37bp_to_NM_004693, uc001saj.2_5end |
EntrezGene: | KRT75 |
HGNC: | 24431 |
UniProt: | O95678 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
respiratory system | 2.99e-16 | 74 |
surface structure | 2.66e-15 | 99 |
gingival epithelium | 4.62e-11 | 3 |
anterior region of body | 1.52e-10 | 62 |
craniocervical region | 1.52e-10 | 62 |
orifice | 3.17e-10 | 36 |
oral opening | 3.19e-10 | 22 |
endoderm-derived structure | 1.20e-09 | 160 |
endoderm | 1.20e-09 | 160 |
presumptive endoderm | 1.20e-09 | 160 |
head | 2.64e-09 | 56 |
mouth | 5.94e-09 | 29 |
stomodeum | 5.94e-09 | 29 |
jaw skeleton | 1.97e-08 | 4 |
splanchnocranium | 1.97e-08 | 4 |
mouth mucosa | 4.48e-08 | 13 |
skin gland | 4.79e-08 | 2 |
epidermis gland | 4.79e-08 | 2 |
gland of integumental system | 4.79e-08 | 2 |
sebaceous gland | 4.79e-08 | 2 |
skin sebaceous gland | 4.79e-08 | 2 |
sweat gland | 4.79e-08 | 2 |
sweat gland placode | 4.79e-08 | 2 |
sebaceous gland placode | 4.79e-08 | 2 |
respiratory tract | 6.34e-08 | 54 |
skin epidermis | 1.31e-07 | 15 |
outer epithelium | 1.31e-07 | 15 |
enveloping layer of ectoderm | 1.31e-07 | 15 |
gland of gut | 1.45e-07 | 10 |
respiratory system epithelium | 1.51e-07 | 28 |
primary subdivision of cranial skeletal system | 8.35e-07 | 5 |