FFCP PHASE1:Hg19::chr12:52818230..52818265,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:52818230..52818265,- | |||
|coexpression_cluster_id=C405 | |||
|description=CAGE_peak_at_chr12:52818230..52818265,- | |description=CAGE_peak_at_chr12:52818230..52818265,- | ||
|id=chr12:52818230..52818265,- | |id=chr12:52818230..52818265,- | ||
|ontology_enrichment_celltype=CL:0002621!4.17e-30!3;CL:0002159!4.65e-16!13;CL:0000317!1.65e-12!2;CL:1000448!1.65e-12!2;CL:0002308!1.65e-12!2;CL:0002140!1.65e-12!2;CL:0000362!3.54e-12!8;CL:0002231!9.66e-09!3;CL:0002166!1.21e-08!3 | |ontology_enrichment_celltype=CL:0002621!4.17e-30!3;CL:0002159!4.65e-16!13;CL:0000317!1.65e-12!2;CL:1000448!1.65e-12!2;CL:0002308!1.65e-12!2;CL:0002140!1.65e-12!2;CL:0000362!3.54e-12!8;CL:0002231!9.66e-09!3;CL:0002166!1.21e-08!3 | ||
|ontology_enrichment_celltype_v019=CL:0000317;7.14e-26;2!CL:1000448;7.14e-26;2!CL:0002308;7.14e-26;2!CL:0002140;7.14e-26;2!CL:0000362;5.13e-23;9!CL:0002231;9.45e-18;3!CL:0002621;9.45e-18;3!CL:0002159;3.17e-15;14!CL:0000312;2.66e-11;5!CL:0000622;3.26e-11;5!CL:0000240;1.22e-09;6!CL:0000311;1.22e-09;6!CL:0000079;1.22e-09;6!CL:0000237;1.22e-09;6!CL:0000154;1.44e-09;6!CL:0000150;8.37e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000317,5.56e-26,2;CL:1000448,5.56e-26,2;CL:0002308,5.56e-26,2;CL:0002140,5.56e-26,2;CL:0000362,4.59e-23,9;CL:0002231,9.46e-18,3;CL:0002621,1.12e-17,3;CL:0002159,2.95e-15,14;CL:0000312,2.66e-11,5;CL:0000622,2.94e-11,5;CL:0000240,1.22e-09,6;CL:0000311,1.22e-09,6;CL:0000079,1.22e-09,6;CL:0000237,1.22e-09,6;CL:0000036,1.22e-09,6;CL:0000357,1.22e-09,6;CL:0000114,1.22e-09,6;CL:0000154,1.32e-09,6;CL:0002077,6.75e-07,34;CL:0000150,7.91e-07,9 | |||
|ontology_enrichment_development_v019=CL:0000357;1.22e-09;6!CL:0000114;1.22e-09;6 | |||
|ontology_enrichment_disease=DOID:3151!4.10e-23!1;DOID:3149!4.10e-23!1;DOID:3451!2.90e-12!2;DOID:4159!2.90e-12!2;DOID:0060122!2.90e-12!2 | |ontology_enrichment_disease=DOID:3151!4.10e-23!1;DOID:3149!4.10e-23!1;DOID:3451!2.90e-12!2;DOID:4159!2.90e-12!2;DOID:0060122!2.90e-12!2 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001949!4.17e-30!3;UBERON:0007029!2.62e-23!1;UBERON:0000014!7.18e-23!4;UBERON:0001003!5.52e-15!14;UBERON:0007376!5.52e-15!14;UBERON:0007383!5.52e-15!14;UBERON:0002419!1.65e-12!2;UBERON:0007771!1.65e-12!2;UBERON:0003297!1.65e-12!2;UBERON:0001821!1.65e-12!2;UBERON:0003487!1.65e-12!2;UBERON:0001820!1.65e-12!2;UBERON:0005089!1.65e-12!2;UBERON:0005088!1.65e-12!2;UBERON:0001828!5.83e-12!8;UBERON:0003102!2.77e-11!95;UBERON:0002097!2.88e-09!40;UBERON:0002199!2.83e-08!45;UBERON:0002416!2.83e-08!45;UBERON:0001708!8.61e-07!4;UBERON:0001704!8.61e-07!4 | |ontology_enrichment_uberon=UBERON:0001949!4.17e-30!3;UBERON:0007029!2.62e-23!1;UBERON:0000014!7.18e-23!4;UBERON:0001003!5.52e-15!14;UBERON:0007376!5.52e-15!14;UBERON:0007383!5.52e-15!14;UBERON:0002419!1.65e-12!2;UBERON:0007771!1.65e-12!2;UBERON:0003297!1.65e-12!2;UBERON:0001821!1.65e-12!2;UBERON:0003487!1.65e-12!2;UBERON:0001820!1.65e-12!2;UBERON:0005089!1.65e-12!2;UBERON:0005088!1.65e-12!2;UBERON:0001828!5.83e-12!8;UBERON:0003102!2.77e-11!95;UBERON:0002097!2.88e-09!40;UBERON:0002199!2.83e-08!45;UBERON:0002416!2.83e-08!45;UBERON:0001708!8.61e-07!4;UBERON:0001704!8.61e-07!4 | ||
|ontology_enrichment_uberon_v019=UBERON:0002419;7.14e-26;2!UBERON:0007771;7.14e-26;2!UBERON:0003297;7.14e-26;2!UBERON:0001821;7.14e-26;2!UBERON:0003487;7.14e-26;2!UBERON:0001820;7.14e-26;2!UBERON:0001949;9.45e-18;3!UBERON:0010371;6.15e-15;31!UBERON:0001003;2.75e-14;15!UBERON:0007376;2.75e-14;15!UBERON:0003929;2.18e-08;7!UBERON:0003350;1.69e-07;8!UBERON:0001828;1.69e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002419,5.56e-26,2;UBERON:0007771,5.56e-26,2;UBERON:0003297,5.56e-26,2;UBERON:0001821,5.56e-26,2;UBERON:0003487,5.56e-26,2;UBERON:0001820,5.56e-26,2;UBERON:0005089,5.56e-26,2;UBERON:0005088,5.56e-26,2;UBERON:0001949,1.12e-17,3;UBERON:0001003,2.58e-14,15;UBERON:0007376,2.58e-14,15;UBERON:0007383,2.58e-14,15;UBERON:0003102,7.68e-09,99;UBERON:0003350,1.80e-07,8;UBERON:0001828,1.80e-07,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09098448236334,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.5972645558399,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425325291727159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20303882181971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30012049207304,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335434687599266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124980407962107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09098448236334,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.5972645558399,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425325291727159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20303882181971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30012049207304,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335434687599266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124980407962107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr12:52818230..52818265,- | |short_description=p@chr12:52818230..52818265,- | ||
}} | }} |
Latest revision as of 09:32, 24 July 2015
Short description: | p@chr12:52818230..52818265, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:52818230..52818265, - |
Coexpression cluster: | C405_Keratinocyte_Mammary_Sebocyte_tongue_Corneal_Mallassezderived_Gingival |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
sebum secreting cell | 5.56e-26 | 2 |
epithelial cell of sweat gland | 5.56e-26 | 2 |
epithelial cell of skin gland | 5.56e-26 | 2 |
acinar cell of sebaceous gland | 5.56e-26 | 2 |
epidermal cell | 4.59e-23 | 9 |
epithelial cell of prostate | 9.46e-18 | 3 |
gingival epithelial cell | 1.12e-17 | 3 |
general ecto-epithelial cell | 2.95e-15 | 14 |
keratinocyte | 2.66e-11 | 5 |
acinar cell | 2.94e-11 | 5 |
stratified squamous epithelial cell | 1.22e-09 | 6 |
keratin accumulating cell | 1.22e-09 | 6 |
stratified epithelial cell | 1.22e-09 | 6 |
keratinizing barrier epithelial cell | 1.22e-09 | 6 |
epithelial fate stem cell | 1.22e-09 | 6 |
stratified epithelial stem cell | 1.22e-09 | 6 |
surface ectodermal cell | 1.22e-09 | 6 |
protein secreting cell | 1.32e-09 | 6 |
ecto-epithelial cell | 6.75e-07 | 34 |
glandular epithelial cell | 7.91e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
skin gland | 5.56e-26 | 2 |
epidermis gland | 5.56e-26 | 2 |
gland of integumental system | 5.56e-26 | 2 |
sebaceous gland | 5.56e-26 | 2 |
skin sebaceous gland | 5.56e-26 | 2 |
sweat gland | 5.56e-26 | 2 |
sweat gland placode | 5.56e-26 | 2 |
sebaceous gland placode | 5.56e-26 | 2 |
gingival epithelium | 1.12e-17 | 3 |
skin epidermis | 2.58e-14 | 15 |
outer epithelium | 2.58e-14 | 15 |
enveloping layer of ectoderm | 2.58e-14 | 15 |
surface structure | 7.68e-09 | 99 |
epithelium of mucosa | 1.80e-07 | 8 |
gingiva | 1.80e-07 | 8 |