FFCP PHASE1:Hg19::chr17:65235942..65235949,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9931 | |EntrezGene=9931 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16878 | |HGNC=16878 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-337bp_to_uc002jfv.3_5end | |association_with_transcript=-337bp_to_uc002jfv.3_5end | ||
|cluster_id=chr17:65235942..65235949,- | |||
|coexpression_cluster_id=C420 | |||
|description=CAGE_peak_16_at_HELZ_5end | |description=CAGE_peak_16_at_HELZ_5end | ||
|id=chr17:65235942..65235949,- | |id=chr17:65235942..65235949,- | ||
|ontology_enrichment_celltype=CL:0002573!1.17e-13!2;CL:0002566!2.50e-10!1;CL:0002574!4.33e-10!1;CL:0000333!2.96e-07!41 | |ontology_enrichment_celltype=CL:0002573!1.17e-13!2;CL:0002566!2.50e-10!1;CL:0002574!4.33e-10!1;CL:0000333!2.96e-07!41 | ||
|ontology_enrichment_celltype_v019=CL:0002573;2.39e-66;2!CL:0000243;4.22e-13;15!CL:0000125;4.22e-13;15!CL:0000095;6.95e-12;17!CL:0002319;8.32e-09;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0002573,2.39e-66,2;CL:0000243,4.22e-13,15;CL:0000125,4.22e-13,15;CL:0000030,4.22e-13,15;CL:0000339,4.22e-13,15;CL:0000095,6.95e-12,17;CL:0000123,6.95e-12,17;CL:0002319,8.32e-09,25 | |||
|ontology_enrichment_development_v019=CL:0000339;4.22e-13;15 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000010;2.62e-23;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000010,2.62e-23,8 | |||
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|short_description=p16@HELZ | |short_description=p16@HELZ | ||
}} | }} |
Latest revision as of 21:46, 16 September 2015
Short description: | p16@HELZ |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_16_at_HELZ_5end |
Coexpression cluster: | C420_schwannoma_salivary_Mammary_skin_squamous_Smooth_cervical |
Association with transcript: | -337bp_to_uc002jfv.3_5end |
EntrezGene: | HELZ |
HGNC: | 16878 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Schwann cell | 2.39e-66 | 2 |
glial cell (sensu Vertebrata) | 4.22e-13 | 15 |
glial cell | 4.22e-13 | 15 |
glioblast | 4.22e-13 | 15 |
glioblast (sensu Vertebrata) | 4.22e-13 | 15 |
neuron associated cell | 6.95e-12 | 17 |
neuron associated cell (sensu Vertebrata) | 6.95e-12 | 17 |
neural cell | 8.32e-09 | 25 |
Ontology term | p-value | n |
---|---|---|
peripheral nervous system | 2.62e-23 | 8 |