FFCP PHASE1:Hg19::chr12:49212518..49212599,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=784 | |EntrezGene=784 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1403 | |HGNC=1403 | ||
|TSSclassifier=strong | |||
|UniProt=F8VWK1 | |UniProt=F8VWK1 | ||
|association_with_transcript=0bp_to_ENST00000548279,ENST00000550771_5end | |association_with_transcript=0bp_to_ENST00000548279,ENST00000550771_5end | ||
|cluster_id=chr12:49212518..49212599,+ | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_3_at_CACNB3_5end | |description=CAGE_peak_3_at_CACNB3_5end | ||
|id=chr12:49212518..49212599,+ | |id=chr12:49212518..49212599,+ | ||
|ontology_enrichment_celltype=CL:0000055!1.02e-08!180;CL:0002319!3.58e-08!25;CL:0000133!1.04e-07!59 | |ontology_enrichment_celltype=CL:0000055!1.02e-08!180;CL:0002319!3.58e-08!25;CL:0000133!1.04e-07!59 | ||
|ontology_enrichment_celltype_v019=CL:0002319;3.08e-12;25!CL:0000095;1.39e-07;17 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,2.23e-12,25;CL:0000133,7.44e-10,59;CL:0000095,1.10e-07,17;CL:0000123,1.10e-07,17;CL:0000333,2.78e-07,41 | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.49e-08;82!UBERON:0006238;3.68e-07;10 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005743!1.64e-34!86;UBERON:0001017!9.19e-34!82;UBERON:0000073!1.54e-32!94;UBERON:0001016!1.54e-32!94;UBERON:0000955!3.54e-28!69;UBERON:0006238!3.54e-28!69;UBERON:0003075!3.00e-26!86;UBERON:0007284!3.00e-26!86;UBERON:0001049!2.32e-25!57;UBERON:0005068!2.32e-25!57;UBERON:0006241!2.32e-25!57;UBERON:0007135!2.32e-25!57;UBERON:0002346!2.47e-25!90;UBERON:0002616!8.90e-24!59;UBERON:0003056!3.70e-21!61;UBERON:0001869!1.64e-20!32;UBERON:0000033!2.35e-20!123;UBERON:0004121!3.06e-20!169;UBERON:0000119!4.70e-20!312;UBERON:0002780!4.91e-20!41;UBERON:0001890!4.91e-20!41;UBERON:0006240!4.91e-20!41;UBERON:0000924!6.00e-20!173;UBERON:0006601!6.00e-20!173;UBERON:0000483!1.69e-19!309;UBERON:0002020!3.99e-19!34;UBERON:0003528!3.99e-19!34;UBERON:0000025!4.35e-19!194;UBERON:0000153!4.36e-19!129;UBERON:0007811!4.36e-19!129;UBERON:0001893!4.99e-19!34;UBERON:0003080!5.88e-19!42;UBERON:0000475!2.11e-18!365;UBERON:0002791!2.31e-18!33;UBERON:0000477!6.47e-18!286;UBERON:0000481!8.77e-18!347;UBERON:0000956!1.57e-17!25;UBERON:0000203!1.57e-17!25;UBERON:0004111!4.51e-17!241;UBERON:0002619!1.93e-16!22;UBERON:0001950!3.55e-15!20;UBERON:0000468!5.46e-14!659;UBERON:0000064!1.47e-12!219;UBERON:0000922!4.50e-12!612;UBERON:0000467!2.56e-11!625;UBERON:0000480!4.21e-11!626;UBERON:0002050!3.23e-10!605;UBERON:0005423!3.23e-10!605;UBERON:0000923!6.64e-10!604;UBERON:0005291!6.64e-10!604;UBERON:0006598!6.64e-10!604;UBERON:0002532!6.64e-10!604;UBERON:0007023!3.19e-09!115;UBERON:0003076!1.38e-07!15;UBERON:0003057!1.38e-07!15;UBERON:0000062!2.41e-07!511;UBERON:0004733!9.39e-07!12;UBERON:0002028!9.39e-07!12;UBERON:0007277!9.39e-07!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;4.18e-30;32!UBERON:0000956;1.68e-28;25!UBERON:0000203;1.68e-28;25!UBERON:0002791;4.40e-28;32!UBERON:0003528;3.02e-27;34!UBERON:0002020;3.02e-27;34!UBERON:0002619;1.03e-26;22!UBERON:0001893;1.26e-26;34!UBERON:0001950;1.41e-24;20!UBERON:0002780;1.02e-22;41!UBERON:0001890;1.02e-22;41!UBERON:0000073;1.95e-21;53!UBERON:0002616;1.95e-21;53!UBERON:0000955;1.89e-19;68!UBERON:0001017;5.36e-19;75!UBERON:0001016;1.20e-15;83!UBERON:0001871;6.81e-09;6!UBERON:0004733;9.99e-09;12!UBERON:0002028;9.99e-09;12!UBERON:0000200;3.04e-08;6!UBERON:0004732;8.01e-08;13!UBERON:0002021;2.98e-07;5!UBERON:0000349;3.86e-07;5!UBERON:0001872;3.91e-07;5!UBERON:0011216;6.98e-07;132!UBERON:0002680;7.93e-07;9!UBERON:0001895;7.93e-07;9 | |||
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| ||
|short_description=p3@CACNB3 | |short_description=p3@CACNB3 | ||
}} | }} |
Latest revision as of 14:30, 18 September 2015
Short description: | p3@CACNB3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CACNB3_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 0bp_to_ENST00000548279, ENST00000550771_5end |
EntrezGene: | CACNB3 |
HGNC: | 1403 |
UniProt: | F8VWK1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 2.23e-12 | 25 |
neurectodermal cell | 7.44e-10 | 59 |
neuron associated cell | 1.10e-07 | 17 |
neuron associated cell (sensu Vertebrata) | 1.10e-07 | 17 |
migratory neural crest cell | 2.78e-07 | 41 |