FFCP PHASE1:Hg19::chr12:48214345..48214362,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51564 | |EntrezGene=51564 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14067 | |HGNC=14067 | ||
|TSSclassifier=strong | |||
|UniProt=C9JGF5 | |UniProt=C9JGF5 | ||
|association_with_transcript=0bp_to_ENST00000433685_5end | |association_with_transcript=0bp_to_ENST00000433685_5end | ||
|cluster_id=chr12:48214345..48214362,- | |||
|coexpression_cluster_id=C1016 | |||
|description=CAGE_peak_3_at_HDAC7_5end | |description=CAGE_peak_3_at_HDAC7_5end | ||
|id=chr12:48214345..48214362,- | |id=chr12:48214345..48214362,- | ||
|ontology_enrichment_celltype=CL:0000055!4.68e-12!180;CL:0000057!2.31e-09!75 | |ontology_enrichment_celltype=CL:0000055!4.68e-12!180;CL:0000057!2.31e-09!75 | ||
|ontology_enrichment_celltype_v019=CL:0000680;9.02e-11;7!CL:0000499;1.73e-10;28!CL:0000188;2.21e-10;9!CL:0000327;9.29e-10;15!CL:0000153;5.08e-07;9!CL:0000447;5.08e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000499,8.12e-11,28;CL:0000188,1.80e-10,9;CL:0000327,4.98e-10,15;CL:0000057,5.79e-09,76;CL:0000153,4.17e-07,9;CL:0000447,4.17e-07,9;CL:0002334,7.61e-07,12 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!8.34e-07!83;UBERON:0002329!8.34e-07!83;UBERON:0003077!8.34e-07!83;UBERON:0003059!8.34e-07!83;UBERON:0007282!8.34e-07!83;UBERON:0009618!8.34e-07!83;UBERON:0007285!8.34e-07!83 | |ontology_enrichment_uberon=UBERON:0000914!8.34e-07!83;UBERON:0002329!8.34e-07!83;UBERON:0003077!8.34e-07!83;UBERON:0003059!8.34e-07!83;UBERON:0007282!8.34e-07!83;UBERON:0009618!8.34e-07!83;UBERON:0007285!8.34e-07!83 | ||
|ontology_enrichment_uberon_v019=UBERON:0001134;1.37e-13;16!UBERON:0002036;1.37e-13;16!UBERON:0004457;1.17e-10;9!UBERON:0000042;1.17e-10;9!UBERON:0003688;7.87e-09;6!UBERON:0002358;7.87e-09;6!UBERON:0003684;7.87e-09;6!UBERON:0001178;7.87e-09;6!UBERON:0004905;3.19e-07;8!UBERON:0000982;3.19e-07;8!UBERON:0004770;3.19e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,6.61e-09,6;UBERON:0002358,6.61e-09,6;UBERON:0003684,6.61e-09,6;UBERON:0001178,6.61e-09,6;UBERON:0004457,1.31e-07,12;UBERON:0000042,1.31e-07,12;UBERON:0004905,3.32e-07,8;UBERON:0000982,3.32e-07,8;UBERON:0004770,3.32e-07,8;UBERON:0002384,5.36e-07,371 | |||
|phase1_expression=1.63510541343501,0.856402095563933,2.81908808191942,1.0007329835313,1.34088328328186,3.48935409640147,0,0,1.04474251279935,0.491467873003018,1.39560233594486,0.873765488520689,1.05506791291381,0.866364470720326,2.31978163009541,0.672325146451775,0,0,0,0.861847406537515,1.02000345622126,0.313454721478088,0.572471974262113,0,0.251085279189606,0,0,0,0,0.383829398097213,0.464448369948228,0,1.204823675113,0,0.154934401160603,0.426507697462265,0,0.553995408531877,0.802177789880567,0.217010870715852,0,0,0,0.290796477559129,0,0.485168122375632,0.232429036905685,0,0,0,0,0,0.344745680736619,0,1.35426486594342,0,0,0,0.306083892370903,0,1.27867425159808,0,0,0.426224750532694,0.290209238628584,0,0,0.502497330513487,0,0,0,0.368277635987565,0,0.633765858935825,0.425208599930087,0,0.673971786878971,0.901061357049038,0.48217676009124,1.14005097496499,0.39783335439818,0.547992461293902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393419540227666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0.127986611154418,0,0,0,0,0,0,2.43806866313962,0,0.639312809217652,5.42158728576849,2.50668955317945,4.49024208778554,0,1.45990461090791,0.283604451492204,0.221729397462564,0.966182642624386,0.261958150995425,2.5500670180478,0.370784442784429,0,0,0.132957960518865,0,0,0,0.198762407366705,0.860234595106124,0,0,0,0.825354125820202,0.208994966536811,0.258416759169329,0.35576626268671,0.33472061276467,0.805658634218294,0.760272105718513,0.488124115096339,0.367663080345869,0,0.267899184852239,0,0.112611480483322,0,0,0.183201743930407,0,0,0,0.993943903390637,0.12663051166458,0.529636723252875,1.72101972449288,0.354668382198357,0.560677600142307,0,0.49333509683432,0,0.134710672069688,0.163461903113459,0.151357427644931,1.72852777344,1.17160715916898,0,1.1409436430889,0.597794722207204,0.939475989150119,0.485618833104395,0,0.408308342509787,0.368502951935304,0.206651562351531,1.18800285728205,0.494533858557114,0,1.43723628363248,0.336672227908132,0.125118519871964,0,0.877955241761676,2.14541457059314,1.05166641234618,0.113432183160021,1.97328599257748,0.213557388818567,0.211931901159562,0.900273288253207,0.412210116953756,2.57640540045629,1.11670113798954,0.168776332241266,0.68205903612839,3.02920529092937,1.01254888506529,2.26304479546337,1.06502877754984,0.403008392910561,0,0,0,0,0.243947412259191,0,0.348581828608555,0.414644220061482,0,0,1.56449532329816,2.57296375277154,0,2.3218396401599,0.721879481669586,0.118306800039844,0.168584690078102,0,0.55146986366197,0.217879444092406,0,0.269662616320329,0.196221465125346,0.38474715694639,0,0,1.2347220339942,0,0,0,0,0,0,0.343135620597051,0.109750285408626,0,0.100528972411631,0.370353780634118,0.977424915930974,0,1.44331342025273,0,0.117408694235822,0.288732895522148,0.925971025153221,0.190254152234598,0,0,0.492434012174795,1.17002132569619,1.33768046059855,0,0.335964256397719,0.141775097242386,0.447792613514241,0.581267877027924,0.766765358330422,0,0,0,0,0,0.126995788584338,0,0,0,0.308482478109971,0,0,2.5790149399433,1.30788020649984,1.54010400223995,0.129271715757778,17.8828222925941,0,0.797814349754612,1.04007436911366,2.05765899409714,0,1.3321108950805,0.57191197463259,0,0,1.62868092146868,0.355391948742546,1.58390374586686,0.301439377059586,0.871533458600294,2.39935178836937,0,0,0,0.239624855491583,1.14861935834114,2.85273810081437,1.01346914667305,1.2328579353023,1.07436577943937,0,0,0,0.128343036279748,0,0,0.773288812777695,0,0,0,0,0.828831026872071,1.71768088406796,1.00034104211935,1.35632511849868,0.623912584592421,0.713715955188647,0.315404830067869,1.05427273493442,2.40756879782175,0,2.0694614258501,0.664225598535437,0.368738337083406,0.521301686808497,1.76221041716467,0.343143423810856,0,0,0.106727557803444,0,0,2.72151263996712,1.48864684691266,1.53461973288062,0.841980283299221,1.66580894032411,1.02341449813341,1.76939313257968,1.48418066444991,0.308419387605311,0.887808626565635,1.06765302817952,0,1.04589340613963,0.241718899183244,0.40101294060657,0.0920809889358963,0.34444334449382,0.182091168006717,0.262248829918848,0,0,0.784349769176855,1.46139224653261,0.211103257785751,0,0,0.215915916102139,0,0.541892875087706,1.00337954770971,0.509752546090077,0,0,0,0,0.256450125116389,0,0,0.515205058238611,0.0915694648183434,0.082509499920588,0,0.650060246036521,0,1.06337790121334,1.54048617114644,1.22802939780904,1.10269257987624,2.90034661144339,2.61030049045611,1.36362603865761,0.801288320820636,0,0,1.78657797492418,0,0.464845549297286,0,0,0.616067160352178,0,0,0.18532421910392,0.143124886741991,0.372158369359667,0.632758849437452,0.190630193923825,1.02359116524534,0.42793898803392,2.22742273548156,0.78494864019923,0.899362287916574,0,0.353437207037059,0.202182481573316,0,0.842516912477962,0.975267478179181,0.243713489631284,0,0.9554993798559,0.565621727814851,1.13008116620243,0.551365343546124,0,0.438450885253763,1.73632660280006,0,0,0.6196469961995,0.281695602532241,0.430234056612155,0.294747123039363,0,0.354761064070598,14.3553192002412,20.7455782564738,0.758946347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| ||
|short_description=p3@HDAC7 | |short_description=p3@HDAC7 | ||
}} | }} |
Latest revision as of 13:19, 18 September 2015
Short description: | p3@HDAC7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_HDAC7_5end |
Coexpression cluster: | C1016_Mesenchymal_Synoviocyte_tenocyte_lung_mesenchymal_diaphragm_breast |
Association with transcript: | 0bp_to_ENST00000433685_5end |
EntrezGene: | HDAC7 |
HGNC: | 14067 |
UniProt: | C9JGF5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
stromal cell | 8.12e-11 | 28 |
cell of skeletal muscle | 1.80e-10 | 9 |
extracellular matrix secreting cell | 4.98e-10 | 15 |
fibroblast | 5.79e-09 | 76 |
GAG secreting cell | 4.17e-07 | 9 |
carbohydrate secreting cell | 4.17e-07 | 9 |
preadipocyte | 7.61e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
omentum | 6.61e-09 | 6 |
peritoneum | 6.61e-09 | 6 |
abdominal cavity | 6.61e-09 | 6 |
visceral peritoneum | 6.61e-09 | 6 |
cavity lining | 1.31e-07 | 12 |
serous membrane | 1.31e-07 | 12 |
articulation | 3.32e-07 | 8 |
skeletal joint | 3.32e-07 | 8 |
articular system | 3.32e-07 | 8 |
connective tissue | 5.36e-07 | 371 |