FFCP PHASE1:Hg19::chr12:47787958..47787968,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:47787958..47787968,- | |||
|coexpression_cluster_id=C817 | |||
|description=CAGE_peak_at_chr12:47787958..47787968,- | |description=CAGE_peak_at_chr12:47787958..47787968,- | ||
|id=chr12:47787958..47787968,- | |id=chr12:47787958..47787968,- | ||
|ontology_enrichment_celltype=CL:0002057!3.76e-36!42;CL:0000860!2.10e-33!45;CL:0002194!1.85e-24!63;CL:0000576!1.85e-24!63;CL:0000040!1.85e-24!63;CL:0000559!1.85e-24!63;CL:0002009!1.47e-23!65;CL:0000839!1.56e-21!70;CL:0000557!3.68e-21!71;CL:0000766!1.89e-19!76;CL:0002087!2.62e-13!119;CL:0002031!1.48e-12!124;CL:0000763!1.22e-11!112;CL:0000049!1.22e-11!112;CL:0000738!1.61e-10!140;CL:0000988!1.14e-09!182;CL:0002032!3.83e-08!165;CL:0000837!3.83e-08!165;CL:0000037!1.32e-07!172;CL:0000566!1.32e-07!172;CL:0000080!2.61e-07!6 | |ontology_enrichment_celltype=CL:0002057!3.76e-36!42;CL:0000860!2.10e-33!45;CL:0002194!1.85e-24!63;CL:0000576!1.85e-24!63;CL:0000040!1.85e-24!63;CL:0000559!1.85e-24!63;CL:0002009!1.47e-23!65;CL:0000839!1.56e-21!70;CL:0000557!3.68e-21!71;CL:0000766!1.89e-19!76;CL:0002087!2.62e-13!119;CL:0002031!1.48e-12!124;CL:0000763!1.22e-11!112;CL:0000049!1.22e-11!112;CL:0000738!1.61e-10!140;CL:0000988!1.14e-09!182;CL:0002032!3.83e-08!165;CL:0000837!3.83e-08!165;CL:0000037!1.32e-07!172;CL:0000566!1.32e-07!172;CL:0000080!2.61e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.37e-41;33!CL:0002057;1.37e-41;33!CL:0000473;6.13e-32;39!CL:0000234;6.13e-32;39!CL:0000576;1.57e-18;48!CL:0000766;2.37e-12;69!CL:0002087;1.96e-09;104!CL:0000763;1.16e-08;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,9.46e-37,42;CL:0002057,9.46e-37,42;CL:0000473,5.05e-32,48;CL:0000234,5.05e-32,48;CL:0002194,2.14e-25,59;CL:0000576,2.14e-25,59;CL:0000040,2.14e-25,59;CL:0000559,2.14e-25,59;CL:0002009,1.53e-24,61;CL:0000839,1.27e-22,66;CL:0000557,2.84e-22,67;CL:0000766,1.14e-20,72;CL:0000988,3.07e-15,177;CL:0002087,4.73e-15,115;CL:0002031,2.26e-14,120;CL:0000763,1.95e-13,108;CL:0000049,1.95e-13,108;CL:0000738,1.57e-12,136;CL:0002032,2.25e-10,161;CL:0000837,2.25e-10,161;CL:0000037,6.95e-10,168 | |||
|ontology_enrichment_development_v019=CL:0002057;1.59e-26;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:0060060;1.84e-14;1!DOID:0060061;1.84e-14;1!DOID:8691;1.84e-14;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060060,1.61e-14,1;DOID:0060061,1.61e-14,1;DOID:8691,1.61e-14,1 | |||
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|ontology_enrichment_uberon_v019=UBERON:0002331;1.13e-12;10!UBERON:0000178;1.23e-08;15!UBERON:0000179;1.23e-08;15!UBERON:0000463;1.23e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,9.63e-25,98;UBERON:0003061,9.63e-25,98;UBERON:0002193,2.41e-22,108;UBERON:0002371,1.56e-19,76;UBERON:0001474,4.92e-18,82;UBERON:0004765,2.43e-16,90;UBERON:0002405,8.83e-16,93;UBERON:0001434,1.34e-14,100;UBERON:0002331,1.09e-12,10;UBERON:0000358,1.09e-12,10;UBERON:0000307,1.09e-12,10;UBERON:0000091,1.09e-12,10;UBERON:0000087,1.09e-12,10;UBERON:0007010,1.09e-12,10;UBERON:0007806,1.09e-12,10;UBERON:0008780,1.09e-12,10;UBERON:0005728,1.09e-12,10;UBERON:0003081,3.15e-11,203;UBERON:0000178,1.20e-08,15;UBERON:0000179,1.20e-08,15;UBERON:0000463,1.20e-08,15;UBERON:0002204,2.98e-08,167 | |||
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| ||
|short_description=p@chr12:47787958..47787968,- | |short_description=p@chr12:47787958..47787968,- | ||
}} | }} |
Latest revision as of 08:47, 24 July 2015
Short description: | p@chr12:47787958..47787968, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:47787958..47787968, - |
Coexpression cluster: | C817_cord_CD14_mycosis_xeroderma_migratory_B_hairy |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 9.46e-37 | 42 |
CD14-positive, CD16-negative classical monocyte | 9.46e-37 | 42 |
defensive cell | 5.05e-32 | 48 |
phagocyte | 5.05e-32 | 48 |
monopoietic cell | 2.14e-25 | 59 |
monocyte | 2.14e-25 | 59 |
monoblast | 2.14e-25 | 59 |
promonocyte | 2.14e-25 | 59 |
macrophage dendritic cell progenitor | 1.53e-24 | 61 |
myeloid lineage restricted progenitor cell | 1.27e-22 | 66 |
granulocyte monocyte progenitor cell | 2.84e-22 | 67 |
myeloid leukocyte | 1.14e-20 | 72 |
hematopoietic cell | 3.07e-15 | 177 |
nongranular leukocyte | 4.73e-15 | 115 |
hematopoietic lineage restricted progenitor cell | 2.26e-14 | 120 |
myeloid cell | 1.95e-13 | 108 |
common myeloid progenitor | 1.95e-13 | 108 |
leukocyte | 1.57e-12 | 136 |
hematopoietic oligopotent progenitor cell | 2.25e-10 | 161 |
hematopoietic multipotent progenitor cell | 2.25e-10 | 161 |
hematopoietic stem cell | 6.95e-10 | 168 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 9.63e-25 | 98 |
blood island | 9.63e-25 | 98 |
hemolymphoid system | 2.41e-22 | 108 |
bone marrow | 1.56e-19 | 76 |
bone element | 4.92e-18 | 82 |
skeletal element | 2.43e-16 | 90 |
immune system | 8.83e-16 | 93 |
skeletal system | 1.34e-14 | 100 |
umbilical cord | 1.09e-12 | 10 |
blastocyst | 1.09e-12 | 10 |
blastula | 1.09e-12 | 10 |
bilaminar disc | 1.09e-12 | 10 |
inner cell mass | 1.09e-12 | 10 |
cleaving embryo | 1.09e-12 | 10 |
connecting stalk | 1.09e-12 | 10 |
inner cell mass derived epiblast | 1.09e-12 | 10 |
extraembryonic mesoderm | 1.09e-12 | 10 |
lateral plate mesoderm | 3.15e-11 | 203 |
blood | 1.20e-08 | 15 |
haemolymphatic fluid | 1.20e-08 | 15 |
organism substance | 1.20e-08 | 15 |
musculoskeletal system | 2.98e-08 | 167 |
Ontology term | p-value | n |
---|---|---|
non-Hodgkin lymphoma | 1.61e-14 | 1 |
cutaneous T cell lymphoma | 1.61e-14 | 1 |
mycosis fungoides | 1.61e-14 | 1 |