FFCP PHASE1:Hg19::chr12:4382933..4382947,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:4382933..4382947,- | |||
|coexpression_cluster_id=C8 | |||
|description=CAGE_peak_at_chr12:4382933..4382947,- | |description=CAGE_peak_at_chr12:4382933..4382947,- | ||
|id=chr12:4382933..4382947,- | |id=chr12:4382933..4382947,- | ||
|ontology_enrichment_celltype=CL:0000738!1.12e-20!140;CL:0000988!1.33e-20!182;CL:0000037!3.64e-19!172;CL:0000566!3.64e-19!172;CL:0000838!2.11e-18!52;CL:0000542!6.39e-18!53;CL:0000051!6.39e-18!53;CL:0002032!3.64e-16!165;CL:0000837!3.64e-16!165;CL:0000080!3.78e-14!6;CL:0000624!1.40e-12!6;CL:0002031!6.48e-12!124;CL:0000084!6.85e-12!25;CL:0000827!6.85e-12!25;CL:0002087!3.37e-11!119;CL:0000791!1.59e-10!18;CL:0000789!1.59e-10!18;CL:0002420!1.59e-10!18;CL:0002419!1.59e-10!18;CL:0000790!1.59e-10!18;CL:0000623!1.86e-08!3;CL:0000825!1.86e-08!3;CL:0000842!5.04e-08!3;CL:0000767!7.08e-08!3;CL:0000081!2.72e-07!11;CL:0000094!2.98e-07!8;CL:0000453!6.20e-07!5;CL:0000898!6.21e-07!3 | |ontology_enrichment_celltype=CL:0000738!1.12e-20!140;CL:0000988!1.33e-20!182;CL:0000037!3.64e-19!172;CL:0000566!3.64e-19!172;CL:0000838!2.11e-18!52;CL:0000542!6.39e-18!53;CL:0000051!6.39e-18!53;CL:0002032!3.64e-16!165;CL:0000837!3.64e-16!165;CL:0000080!3.78e-14!6;CL:0000624!1.40e-12!6;CL:0002031!6.48e-12!124;CL:0000084!6.85e-12!25;CL:0000827!6.85e-12!25;CL:0002087!3.37e-11!119;CL:0000791!1.59e-10!18;CL:0000789!1.59e-10!18;CL:0002420!1.59e-10!18;CL:0002419!1.59e-10!18;CL:0000790!1.59e-10!18;CL:0000623!1.86e-08!3;CL:0000825!1.86e-08!3;CL:0000842!5.04e-08!3;CL:0000767!7.08e-08!3;CL:0000081!2.72e-07!11;CL:0000094!2.98e-07!8;CL:0000453!6.20e-07!5;CL:0000898!6.21e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000623;2.81e-30;3!CL:0000226;1.41e-28;3!CL:0000842;1.41e-28;3!CL:0000081;3.76e-14;11!CL:0000767;1.93e-13;3!CL:0000094;2.96e-11;8!CL:0000084;2.16e-09;25!CL:0000791;1.07e-08;18!CL:0000789;1.07e-08;18!CL:0002419;1.07e-08;18!CL:0000625;2.03e-08;11!CL:0000542;4.54e-08;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000623,2.82e-30,3;CL:0000825,2.82e-30,3;CL:0000226,1.79e-28,3;CL:0000842,1.79e-28,3;CL:0000738,2.13e-17,136;CL:0000988,1.37e-14,177;CL:0000081,3.64e-14,11;CL:0000838,1.07e-13,52;CL:0000037,1.34e-13,168;CL:0000767,1.82e-13,3;CL:0000542,2.05e-13,53;CL:0000051,2.05e-13,53;CL:0002087,8.90e-12,115;CL:0000094,2.86e-11,8;CL:0000084,2.14e-09,25;CL:0000827,2.14e-09,25;CL:0002032,2.78e-09,161;CL:0000837,2.78e-09,161;CL:0000791,1.01e-08,18;CL:0000789,1.01e-08,18;CL:0002420,1.01e-08,18;CL:0002419,1.01e-08,18;CL:0000790,1.01e-08,18;CL:0000625,2.00e-08,11;CL:0002031,7.22e-08,120 | |||
|ontology_enrichment_development_v019=CL:0000790;1.07e-08;18!CL:0000051;4.54e-08;53 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:0060060;1.05e-10;1!DOID:0060061;1.05e-10;1!DOID:8691;1.05e-10;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060060,1.33e-10,1;DOID:0060061,1.33e-10,1;DOID:8691,1.33e-10,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.48e-10;15!UBERON:0000179;2.48e-10;15!UBERON:0000463;2.48e-10;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,2.64e-10,15;UBERON:0000179,2.64e-10,15;UBERON:0000463,2.64e-10,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.840547463227464,0.903106483949403,1.18066171970519,1.18009283054671,1.91914699048606,0.619264493264304,0,0,0,0,0,0,0.553995408531877,0.802177789880567,2.38711957787437,0,0,0,0,0.377875943688809,0,0,0,0,0,0,0,0,0,0,0,0,0.224723484445085,0,0.320929027076094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0,2.64342657158052,1.68152568894461,0,0.196709770113833,1.57204305099666,0.616804496998528,0,0.32592226663359,0,0,0,0.294605907474837,0,0.270803863765016,0.512365278902701,1.43065282315866,0.822189523018381,0.829050053357545,0.579606171470105,0,0,0,0,0.383220493601921,0,0,0,0,0,0,0,0,0,0,4.83856183739358,2.67440195783507,1.30341963494519,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,3.87780264148325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0.252320850875628,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0.144119953416961,0.25248486685276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336255431980582,12.8069994131253,14.8783026653067,13.7327048819331,0,0,0.773288812777695,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24060815673732,1.07857100409308,1.81436848265855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0.178064071293475,0,0.192190067365106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0.211673582723883,0,0.280797178113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33307196799782,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0,0,0,0.398495976502139,0,0,0,0.369254416383208,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0,0,0,0,0,0,0,0,0,0.156980256395025,0,0,0,0.167821586975843,0,0,0,0,0,0,0,0,0,6.52346483097368,0.617819694732514,0.626531697032732,0,0,0,0.729819156862664,0.19566461893209,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0.137041924646751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.262887354279314,0.279282401272254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.415440338029185,0.449947783103001,1.5476039091159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0.13223260174269,0,0,0,0,0,0,0.790446527591777,0,0,0,0,0,0,0,0.886068179966986,0,0,0,0,0,0.276697269872462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0.132864840313363,0,0,0,0,1.19992437512958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0,0.546974809018219,0,0,0,0,0,0,0,0,0,0.460935950223117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392616934229891,0,0,0,0,0,0.199882311849858,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.886889507080059,0,0,0,0,0,0,0.829169439458779,0.103432995861895,0,0.23806443146374,0.0645889098360061,0,0,0,0,0,0.342233301085281,0,0,0,0,0,0,0,0,0,0,0,0,0.320568492303233 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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.840547463227464,0.903106483949403,1.18066171970519,1.18009283054671,1.91914699048606,0.619264493264304,0,0,0,0,0,0,0.553995408531877,0.802177789880567,2.38711957787437,0,0,0,0,0.377875943688809,0,0,0,0,0,0,0,0,0,0,0,0,0.224723484445085,0,0.320929027076094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0,2.64342657158052,1.68152568894461,0,0.196709770113833,1.57204305099666,0.616804496998528,0,0.32592226663359,0,0,0,0.294605907474837,0,0.270803863765016,0.512365278902701,1.43065282315866,0.822189523018381,0.829050053357545,0.579606171470105,0,0,0,0,0.383220493601921,0,0,0,0,0,0,0,0,0,0,4.83856183739358,2.67440195783507,1.30341963494519,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,3.87780264148325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0.252320850875628,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0.144119953416961,0.25248486685276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336255431980582,12.8069994131253,14.8783026653067,13.7327048819331,0,0,0.773288812777695,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24060815673732,1.07857100409308,1.81436848265855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0.178064071293475,0,0.192190067365106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0.211673582723883,0,0.280797178113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33307196799782,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0,0,0,0.398495976502139,0,0,0,0.369254416383208,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0,0,0,0,0,0,0,0,0,0.156980256395025,0,0,0,0.167821586975843,0,0,0,0,0,0,0,0,0,6.52346483097368,0.617819694732514,0.626531697032732,0,0,0,0.729819156862664,0.19566461893209,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0.137041924646751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.262887354279314,0.279282401272254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.415440338029185,0.449947783103001,1.5476039091159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0.13223260174269,0,0,0,0,0,0,0.790446527591777,0,0,0,0,0,0,0,0.886068179966986,0,0,0,0,0,0.276697269872462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0.132864840313363,0,0,0,0,1.19992437512958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0,0.546974809018219,0,0,0,0,0,0,0,0,0,0.460935950223117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392616934229891,0,0,0,0,0,0.199882311849858,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.886889507080059,0,0,0,0,0,0,0.829169439458779,0.103432995861895,0,0.23806443146374,0.0645889098360061,0,0,0,0,0,0.342233301085281,0,0,0,0,0,0,0,0,0,0,0,0,0.320568492303233 | ||
|short_description=p@chr12:4382933..4382947,- | |short_description=p@chr12:4382933..4382947,- | ||
}} | }} |
Latest revision as of 08:29, 24 July 2015
Short description: | p@chr12:4382933..4382947, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:4382933..4382947, - |
Coexpression cluster: | C8_Natural_CD8_Basophils_CD4_CD14_Peripheral_CD34 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
natural killer cell | 2.82e-30 | 3 |
pro-NK cell | 2.82e-30 | 3 |
single nucleate cell | 1.79e-28 | 3 |
mononuclear cell | 1.79e-28 | 3 |
leukocyte | 2.13e-17 | 136 |
hematopoietic cell | 1.37e-14 | 177 |
blood cell | 3.64e-14 | 11 |
lymphoid lineage restricted progenitor cell | 1.07e-13 | 52 |
hematopoietic stem cell | 1.34e-13 | 168 |
basophil | 1.82e-13 | 3 |
lymphocyte | 2.05e-13 | 53 |
common lymphoid progenitor | 2.05e-13 | 53 |
nongranular leukocyte | 8.90e-12 | 115 |
granulocyte | 2.86e-11 | 8 |
T cell | 2.14e-09 | 25 |
pro-T cell | 2.14e-09 | 25 |
hematopoietic oligopotent progenitor cell | 2.78e-09 | 161 |
hematopoietic multipotent progenitor cell | 2.78e-09 | 161 |
mature alpha-beta T cell | 1.01e-08 | 18 |
alpha-beta T cell | 1.01e-08 | 18 |
immature T cell | 1.01e-08 | 18 |
mature T cell | 1.01e-08 | 18 |
immature alpha-beta T cell | 1.01e-08 | 18 |
CD8-positive, alpha-beta T cell | 2.00e-08 | 11 |
hematopoietic lineage restricted progenitor cell | 7.22e-08 | 120 |
Ontology term | p-value | n |
---|---|---|
blood | 2.64e-10 | 15 |
haemolymphatic fluid | 2.64e-10 | 15 |
organism substance | 2.64e-10 | 15 |
Ontology term | p-value | n |
---|---|---|
non-Hodgkin lymphoma | 1.33e-10 | 1 |
cutaneous T cell lymphoma | 1.33e-10 | 1 |
mycosis fungoides | 1.33e-10 | 1 |