FFCP PHASE1:Hg19::chr12:41374749..41374779,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:41374749..41374779,+ | |||
|coexpression_cluster_id=C139 | |||
|description=CAGE_peak_at_chr12:41374749..41374779,+ | |description=CAGE_peak_at_chr12:41374749..41374779,+ | ||
|id=chr12:41374749..41374779,+ | |id=chr12:41374749..41374779,+ | ||
|ontology_enrichment_celltype=CL:0002319!1.81e-07!25;CL:0002166!6.35e-07!3 | |ontology_enrichment_celltype=CL:0002319!1.81e-07!25;CL:0002166!6.35e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000047;7.30e-15;2!CL:0002605;1.31e-10;3!CL:0002166;2.53e-10;3!CL:0002579;3.84e-10;3!CL:0000128;6.40e-10;7!CL:0000126;6.40e-10;7!CL:0000127;6.40e-10;7!CL:0002621;6.81e-10;3!CL:0002319;5.50e-09;25!CL:0000511;1.13e-08;1!CL:0002625;1.13e-08;1!CL:0000216;1.13e-08;1!CL:0002568;4.89e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002605,1.22e-10,3;CL:0002166,2.59e-10,3;CL:0002579,3.27e-10,3;CL:0000128,6.12e-10,7;CL:0000126,6.12e-10,7;CL:0000127,6.12e-10,7;CL:0002453,6.12e-10,7;CL:0002621,7.46e-10,3;CL:0002319,5.38e-09,25;CL:0000511,1.13e-08,1;CL:0002625,1.13e-08,1;CL:0000216,1.13e-08,1;CL:0000047,2.09e-08,8;CL:0002568,3.57e-08,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:2394;3.53e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,3.77e-08,14 | |||
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|ontology_enrichment_uberon_v019=UBERON:0001949;6.81e-10;3!UBERON:0000992;8.43e-09;13!UBERON:0001136;1.13e-08;1!UBERON:0001343;1.13e-08;1!UBERON:0004910;1.13e-08;1!UBERON:0004813;1.13e-08;1!UBERON:0000991;3.14e-08;21!UBERON:0001708;5.94e-08;4!UBERON:0008895;5.94e-08;4!UBERON:0002119;7.18e-08;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001949,7.46e-10,3;UBERON:0000992,9.07e-09,13;UBERON:0001136,1.13e-08,1;UBERON:0001343,1.13e-08,1;UBERON:0004910,1.13e-08,1;UBERON:0005154,1.13e-08,1;UBERON:0005295,1.13e-08,1;UBERON:0004813,1.13e-08,1;UBERON:0005297,1.13e-08,1;UBERON:0005294,1.13e-08,1;UBERON:0010141,1.13e-08,1;UBERON:0005891,1.13e-08,1;UBERON:0000991,3.32e-08,21;UBERON:0009196,3.32e-08,21;UBERON:0009117,3.32e-08,21;UBERON:0005564,3.32e-08,21;UBERON:0001708,6.04e-08,4;UBERON:0008895,6.04e-08,4;UBERON:0004176,8.03e-08,22;UBERON:0002119,8.53e-08,4 | |||
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| ||
|short_description=p@chr12:41374749..41374779,+ | |short_description=p@chr12:41374749..41374779,+ | ||
}} | }} |
Latest revision as of 08:26, 24 July 2015
Short description: | p@chr12:41374749..41374779, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:41374749..41374779, + |
Coexpression cluster: | C139_astrocytoma_skin_salivary_gall_serous_Mallassezderived_renal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebral cortex | 1.22e-10 | 3 |
epithelial cell of Malassez | 2.59e-10 | 3 |
omentum preadipocyte | 3.27e-10 | 3 |
oligodendrocyte | 6.12e-10 | 7 |
macroglial cell | 6.12e-10 | 7 |
astrocyte | 6.12e-10 | 7 |
oligodendrocyte precursor cell | 6.12e-10 | 7 |
gingival epithelial cell | 7.46e-10 | 3 |
neural cell | 5.38e-09 | 25 |
androgen binding protein secreting cell | 1.13e-08 | 1 |
seminiferous tubule epithelial cell | 1.13e-08 | 1 |
Sertoli cell | 1.13e-08 | 1 |
neuronal stem cell | 2.09e-08 | 8 |
mesenchymal stem cell of Wharton's jelly | 3.57e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
gingival epithelium | 7.46e-10 | 3 |
female gonad | 9.07e-09 | 13 |
mesothelium | 1.13e-08 | 1 |
seminiferous tubule of testis | 1.13e-08 | 1 |
epithelium of male gonad | 1.13e-08 | 1 |
epithelial cord | 1.13e-08 | 1 |
sex cord | 1.13e-08 | 1 |
seminiferous tubule epithelium | 1.13e-08 | 1 |
testis sex cord | 1.13e-08 | 1 |
genital ridge | 1.13e-08 | 1 |
primitive sex cord of indifferent gonad | 1.13e-08 | 1 |
coelomic epithelium | 1.13e-08 | 1 |
gonad | 3.32e-08 | 21 |
indifferent external genitalia | 3.32e-08 | 21 |
indifferent gonad | 3.32e-08 | 21 |
gonad primordium | 3.32e-08 | 21 |
jaw skeleton | 6.04e-08 | 4 |
splanchnocranium | 6.04e-08 | 4 |
external genitalia | 8.03e-08 | 22 |
left ovary | 8.53e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 3.77e-08 | 14 |