FFCP PHASE1:Hg19::chr10:90750010..90750015,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr10:90750010..90750015,+
|short_description=p15@FAS
|description=CAGE_peak_15_at_FAS_5end
|association_with_transcript=-272bp_to_NM_000043,NM_152871,NM_152872...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=355 | |EntrezGene=355 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11920 | |HGNC=11920 | ||
|UniProt=P25445, | |TSSclassifier=strong | ||
|UniProt=P25445,Q5T9P3 | |||
|association_with_transcript=-272bp_to_NM_000043,NM_152871,NM_152872,NR_028033,NR_028034,NR_028035,NR_028036,uc001kfr.2,uc001kfs.2,uc001kft.2,uc001kfw.2,uc010qnb.1,uc010qnc.1,uc010qnd.1,uc010qne.1_5end | |||
|cluster_id=chr10:90750010..90750015,+ | |||
|coexpression_cluster_id=C152 | |||
|description=CAGE_peak_15_at_FAS_5end | |||
|id=chr10:90750010..90750015,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000346;5.96e-34;3!CL:1000428;5.96e-34;3!CL:0002559;5.15e-21;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000346,5.96e-34,3;CL:1000428,5.96e-34,3;CL:0002559,5.15e-21,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!2.60e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:171;2.73e-11;10 | |||
|ontology_enrichment_disease_v019_2=DOID:171,2.73e-11,10 | |||
|ontology_enrichment_uberon=UBERON:0000992!1.89e-10!13;UBERON:0002323!8.58e-08!46;UBERON:0000991!9.08e-08!21;UBERON:0009196!9.08e-08!21;UBERON:0009117!9.08e-08!21;UBERON:0005564!9.08e-08!21;UBERON:0002119!1.38e-07!4;UBERON:0004531!1.38e-07!4;UBERON:0004176!2.35e-07!22;UBERON:0004458!3.76e-07!49 | |||
|ontology_enrichment_uberon_v019=UBERON:0000412;5.96e-34;3!UBERON:0001992;5.96e-34;3!UBERON:0002346;5.56e-26;4!UBERON:0000923;5.56e-26;4!UBERON:0010316;5.56e-26;4!UBERON:0005291;5.56e-26;4!UBERON:0002050;4.21e-21;5!UBERON:0005423;4.21e-21;5!UBERON:0002073;5.15e-21;5!UBERON:0002067;2.45e-12;9!UBERON:0001003;5.93e-08;15!UBERON:0007376;5.93e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000412,5.96e-34,3;UBERON:0001992,5.96e-34,3;UBERON:0002073,5.15e-21,5;UBERON:0005086,5.15e-21,5;UBERON:0002067,2.45e-12,9;UBERON:0004016,2.45e-12,9;UBERON:0010083,2.45e-12,9;UBERON:0001003,5.93e-08,15;UBERON:0007376,5.93e-08,15;UBERON:0007383,5.93e-08,15 | |||
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| ||
|short_description=p15@FAS | |||
}} | }} |
Latest revision as of 20:40, 19 September 2015
Short description: | p15@FAS |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_15_at_FAS_5end |
Coexpression cluster: | C152_peripheral_neuroectodermal_neuroepithelioma_neuroblastoma_testicular_carcinoid_lung |
Association with transcript: | -272bp_to_NM_000043, NM_152871, NM_152872, NR_028033, NR_028034, NR_028035, NR_028036, uc001kfr.2, uc001kfs.2, uc001kft.2, uc001kfw.2, uc010qnb.1, uc010qnc.1, uc010qnd.1, uc010qne.1_5end |
EntrezGene: | FAS |
HGNC: | 11920 |
UniProt: | P25445Q5T9P3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hair follicle dermal papilla cell | 5.96e-34 | 3 |
stem cell of epidermis | 5.96e-34 | 3 |
hair follicle cell | 5.15e-21 | 5 |
Ontology term | p-value | n |
---|---|---|
dermal papilla | 5.96e-34 | 3 |
papillary layer of dermis | 5.96e-34 | 3 |
hair follicle | 5.15e-21 | 5 |
hair follicle placode | 5.15e-21 | 5 |
dermis | 2.45e-12 | 9 |
dermatome | 2.45e-12 | 9 |
future dermis | 2.45e-12 | 9 |
skin epidermis | 5.93e-08 | 15 |
outer epithelium | 5.93e-08 | 15 |
enveloping layer of ectoderm | 5.93e-08 | 15 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 2.73e-11 | 10 |