FFCP PHASE1:Hg19::chr12:40618680..40618710,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:40618680..40618710,- | |||
|coexpression_cluster_id=C344 | |||
|description=CAGE_peak_at_chr12:40618680..40618710,- | |description=CAGE_peak_at_chr12:40618680..40618710,- | ||
|id=chr12:40618680..40618710,- | |id=chr12:40618680..40618710,- | ||
|ontology_enrichment_celltype=CL:0002057!1.05e-35!42;CL:0000766!2.14e-33!76;CL:0000860!5.17e-33!45;CL:0002194!2.99e-32!63;CL:0000576!2.99e-32!63;CL:0000040!2.99e-32!63;CL:0000559!2.99e-32!63;CL:0002009!7.95e-32!65;CL:0000557!6.72e-28!71;CL:0000839!1.92e-27!70;CL:0000738!2.54e-24!140;CL:0002087!5.47e-24!119;CL:0002031!6.12e-20!124;CL:0000763!1.02e-19!112;CL:0000049!1.02e-19!112;CL:0000037!7.59e-18!172;CL:0000566!7.59e-18!172;CL:0002032!3.93e-17!165;CL:0000837!3.93e-17!165;CL:0000988!1.23e-15!182;CL:0000236!5.20e-08!14;CL:0002393!7.50e-08!9;CL:0002397!7.50e-08!9 | |ontology_enrichment_celltype=CL:0002057!1.05e-35!42;CL:0000766!2.14e-33!76;CL:0000860!5.17e-33!45;CL:0002194!2.99e-32!63;CL:0000576!2.99e-32!63;CL:0000040!2.99e-32!63;CL:0000559!2.99e-32!63;CL:0002009!7.95e-32!65;CL:0000557!6.72e-28!71;CL:0000839!1.92e-27!70;CL:0000738!2.54e-24!140;CL:0002087!5.47e-24!119;CL:0002031!6.12e-20!124;CL:0000763!1.02e-19!112;CL:0000049!1.02e-19!112;CL:0000037!7.59e-18!172;CL:0000566!7.59e-18!172;CL:0002032!3.93e-17!165;CL:0000837!3.93e-17!165;CL:0000988!1.23e-15!182;CL:0000236!5.20e-08!14;CL:0002393!7.50e-08!9;CL:0002397!7.50e-08!9 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.21e-72;33!CL:0002057;1.21e-72;33!CL:0000473;2.78e-53;39!CL:0000234;2.78e-53;39!CL:0000576;2.01e-51;48!CL:0000766;9.81e-30;69!CL:0002087;1.22e-16;104!CL:0000236;6.40e-15;13!CL:0000763;6.97e-15;100!CL:0000738;6.13e-14;136!CL:0000945;8.35e-11;24!CL:0000775;8.71e-10;3!CL:0000988;8.29e-08;177!CL:0000219;2.58e-07;193 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.02e-82,42;CL:0002057,1.02e-82,42;CL:0000473,4.85e-75,48;CL:0000234,4.85e-75,48;CL:0002194,1.38e-64,59;CL:0000576,1.38e-64,59;CL:0000040,1.38e-64,59;CL:0000559,1.38e-64,59;CL:0000766,8.13e-64,72;CL:0002009,4.02e-62,61;CL:0000839,1.31e-56,66;CL:0000557,1.33e-55,67;CL:0002087,4.10e-49,115;CL:0000738,6.29e-48,136;CL:0002031,1.65e-46,120;CL:0000763,1.43e-38,108;CL:0000049,1.43e-38,108;CL:0002032,2.83e-38,161;CL:0000837,2.83e-38,161;CL:0000037,4.38e-36,168;CL:0000988,1.59e-33,177;CL:0000236,6.52e-14,14;CL:0000134,7.75e-12,354;CL:0002320,2.47e-11,361;CL:0000945,9.08e-11,24;CL:0000826,9.08e-11,24;CL:0000775,8.65e-10,3;CL:0000219,1.42e-09,386;CL:0000048,4.41e-09,427;CL:0000723,9.31e-09,433;CL:0000034,2.44e-08,441;CL:0002393,6.02e-07,9;CL:0002397,6.02e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002057;1.08e-58;42!CL:0000049;5.75e-13;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.00e-27!102;UBERON:0003061!3.00e-27!102;UBERON:0002371!3.70e-24!80;UBERON:0002193!4.30e-24!112;UBERON:0001474!1.80e-21!86;UBERON:0007023!1.85e-19!115;UBERON:0004765!2.88e-19!101;UBERON:0001434!2.88e-19!101;UBERON:0002405!9.49e-15!115;UBERON:0002204!7.19e-11!167;UBERON:0002780!7.36e-08!41;UBERON:0001890!7.36e-08!41;UBERON:0006240!7.36e-08!41;UBERON:0003081!8.11e-08!216;UBERON:0000479!1.32e-07!787;UBERON:0003080!1.80e-07!42;UBERON:0001049!2.02e-07!57;UBERON:0005068!2.02e-07!57;UBERON:0006241!2.02e-07!57;UBERON:0007135!2.02e-07!57;UBERON:0002616!6.12e-07!59 | |ontology_enrichment_uberon=UBERON:0002390!3.00e-27!102;UBERON:0003061!3.00e-27!102;UBERON:0002371!3.70e-24!80;UBERON:0002193!4.30e-24!112;UBERON:0001474!1.80e-21!86;UBERON:0007023!1.85e-19!115;UBERON:0004765!2.88e-19!101;UBERON:0001434!2.88e-19!101;UBERON:0002405!9.49e-15!115;UBERON:0002204!7.19e-11!167;UBERON:0002780!7.36e-08!41;UBERON:0001890!7.36e-08!41;UBERON:0006240!7.36e-08!41;UBERON:0003081!8.11e-08!216;UBERON:0000479!1.32e-07!787;UBERON:0003080!1.80e-07!42;UBERON:0001049!2.02e-07!57;UBERON:0005068!2.02e-07!57;UBERON:0006241!2.02e-07!57;UBERON:0007135!2.02e-07!57;UBERON:0002616!6.12e-07!59 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;5.85e-08;15!UBERON:0000179;5.85e-08;15!UBERON:0000463;5.85e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.41e-50,98;UBERON:0003061,3.41e-50,98;UBERON:0002371,9.75e-48,76;UBERON:0002193,2.22e-44,108;UBERON:0001474,1.91e-43,82;UBERON:0004765,1.31e-38,90;UBERON:0002405,5.23e-37,93;UBERON:0001434,1.20e-33,100;UBERON:0003081,7.07e-21,203;UBERON:0002204,7.10e-18,167;UBERON:0002384,1.19e-10,371;UBERON:0000926,1.33e-09,315;UBERON:0004120,1.33e-09,315;UBERON:0006603,1.33e-09,315;UBERON:0000178,7.74e-08,15;UBERON:0000179,7.74e-08,15;UBERON:0000463,7.74e-08,15 | |||
|phase1_expression=0,0.428201047781966,0,0,0,0,0,0,0.522371256399677,0,0,0,0,0,0,0,0,0,0,0,0,0.313454721478088,0,0,0,0.61130724598361,1.06730766284929,1.10195093839151,0.393364276848904,0.767658796194425,0.77408061658038,0,0,0,0,0,0.880801318004542,1.10799081706375,0.601633342410425,0.868043482863407,2.01523926815932,0.971680998056939,2.31818010870768,3.48955773070955,1.13362783106643,2.91100873425379,1.62700325833979,1.23350366406548,1.54853185447552,10.6446185159196,5.12321413058201,10.8781825748749,2.06847408441971,1.93645405075148,1.35426486594342,2.07066573496865,1.63743690034707,2.24723484445085,2.14258724659632,1.28371610830437,1.91801137739712,4.94776950280074,6.78176435913548,4.26224750532694,2.61188314765726,1.70215567407342,1.86846674698672,6.53246529667532,2.60741459210101,7.60160956467908,3.02699751316684,2.57794345191295,4.43047342417238,0.845021145247767,1.91343869968539,2.30624510059213,1.68492946719743,1.35159203557356,1.6072558669708,0.855038231223746,2.18808344918999,1.64397738388171,3.51992488922645,2.73069305631066,3.55803701545422,1.28019066769952,1.20118796110804,2.29900975981793,1.98313461835459,3.81621501814146,1.70763890732835,0.587237189370939,0.764546456250458,0,0,0.263384084775077,0,0,0,0,0,0.473447805734733,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0.327447688744282,0,0.370784442784429,0.649094787309367,0,0.26591592103773,0.476981248610684,0,0,0,0,0,0.56530794192401,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,10.5424333948851,0,0,0,0,0,0,0.354668382198357,0.560677600142307,0,0,0,0,0,0,0.576175924479999,0.468642863667593,0,0,0,0,0,0.280901613404497,0.61246251376468,0,0.413303124703062,0,0.247266929278557,0,0,0.168336113954066,0,0.277064115484183,0.438977620880838,0.612975591598039,0.300476117813194,0,0,0,0,0.300091096084402,0,0,0.37223371266318,0.168776332241266,0,0.252433774244115,0.0920498986422993,0.484938170456436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.72351904261178,0.468008530278475,0.445893486866185,0,0,0,0,0,0,0,0.088048434013226,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.845302752556,0,0,0,0,0,0,0.542621605391443,0,0,0,0,0,0,0.099972991182057,0,0.502257091432126,0,0.239624855491583,0,0,0,0.205476322550383,0,0,0,0,0,0,1.30139853857622,0,0,0,13.4821264310493,5.9832291840805,9.53155680902882,0.24538298343828,0,0,0.415941723061614,0,0.157702415033935,0,0.300946099727719,0,0,0,0.184369168541703,0.0868836144680828,0,0,0.620304078368662,0.647142602455851,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0.177561725313127,0.0821271560138091,0,0,0,0,0,0,0.182091168006717,0.524497659837696,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.9273691048295,0,0,0,0,0,0,0,0.15350367472613,0,0.429680979473094,0.145016693914229,0,0,0,0,0,0,0,0,0,0,0,0,0.18532421910392,0,0,0,0,0,0.42793898803392,0.318203247925937,0,0.179872457583315,0,0,0,1.58510321173008,0,0,0.243713489631284,0,0,0.141405431953713,1.13008116620243,0,0,0,0,0.655894752046633,0,0.30982349809975,0,0,0,0,0,0,0.329294892959902,0,0.349934720244983,0,0,0,0.659006605437454,0,0,0,0,1.01489521846434,3.0585488285695,3.41788312304498,3.57347663186684,2.46817363851717,1.29694662238543,0,3.17250070517708,0,0,0,0.371606350251437,0,0,0,0,0,0,0,0,0.684704037099577,0,0,0,0.1605880751037,0.201799707191048,0,0,0,0.447352215784832,0.166849141711909,0,0,0,0,0,0,0,0.439524537815682,0,0,0,0,0,0,0,0.281338832821026,0.111308705022906,0,0,0,1.38141957765574,0,0.102268682502155,0,0,0,0,0,0.197286811273867,0,0,0,0.185536196323703,0,0,0,0,0.1137934482855,0,0,0,0,0.173624994933292,0.885741385813839,1.32656082487949,0,0,0.295547618953547,0.219385397153973,0,0,1.15425387755696,0,0,0,0,0,0,0,0,0,0.166211681900156,0.225595660617181,0,0,0.189753732724185,0,0,0,0,0,0,0.265372693510018,1.22206028986725,0,0,0,0.269604531922708,0,0.937057782901357,0,0,0,0,0,0.30607276163049,0.189559738885464,0.150323419414493,0,0,0,0,0,0,0,0,0,0,1.39781334593624,0.171986032471617,0,0,0.0821154570532092,0.678923115418936,0.0882561266915003,0.677942222341597,0,0,0.379864775735272,0,0,0.426905989478705,0,0,0.114536596165916,0,0,0,0,0,0.104602846312333,0,0.288950589901519,1.20084057741958,0.136905378891993,0,0,0.262887354279314,0.837847203816763,0.687481272035051,0,0.199679000498991,0,0,0.134366944973453,0,0,0,0,0,0,0,0,0.544813624446302,0,0,0,0.449947783103001,0,0.364497339948148,0,0.551639951094387,0.472091293214983,0,0.179287339332845,0,0,0,0,0.542999601753713,0,0.326587360109409,0,0,0,0,0,0,0.258565912723101,0.39669780522807,0.171086837884329,0,1.28144895081234,0.157204305099666,0.828478110694391,0.496166021811951,0,0.60896299190448,0,2.72008901684737,0.5013797880454,1.22538230705385,1.63936315354902,0.157054096250234,0,0.244052529803926,0.3755727921195,0,0.221858103073705,0.620964029413834,0,0,0,0,0,0,0,0,0.233713309847224,0,0,0.251567901752575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.181848659202559,0,0,0,0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| ||
|short_description=p@chr12:40618680..40618710,- | |short_description=p@chr12:40618680..40618710,- | ||
}} | }} |
Latest revision as of 08:22, 24 July 2015
Short description: | p@chr12:40618680..40618710, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:40618680..40618710, - |
Coexpression cluster: | C344_Neutrophils_CD14_Eosinophils_Whole_blood_CD14CD16_gall |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.41e-50 | 98 |
blood island | 3.41e-50 | 98 |
bone marrow | 9.75e-48 | 76 |
hemolymphoid system | 2.22e-44 | 108 |
bone element | 1.91e-43 | 82 |
skeletal element | 1.31e-38 | 90 |
immune system | 5.23e-37 | 93 |
skeletal system | 1.20e-33 | 100 |
lateral plate mesoderm | 7.07e-21 | 203 |
musculoskeletal system | 7.10e-18 | 167 |
connective tissue | 1.19e-10 | 371 |
mesoderm | 1.33e-09 | 315 |
mesoderm-derived structure | 1.33e-09 | 315 |
presumptive mesoderm | 1.33e-09 | 315 |
blood | 7.74e-08 | 15 |
haemolymphatic fluid | 7.74e-08 | 15 |
organism substance | 7.74e-08 | 15 |