FFCP PHASE1:Hg19::chr17:54991395..54991453,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7706 | |EntrezGene=7706 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12932 | |HGNC=12932 | ||
|TSSclassifier=strong | |||
|UniProt=Q14258 | |UniProt=Q14258 | ||
|association_with_transcript=0bp_to_ENST00000316881,NM_005082,uc002iut.2,uc010dcj.2_5end | |association_with_transcript=0bp_to_ENST00000316881,NM_005082,uc002iut.2,uc010dcj.2_5end | ||
|cluster_id=chr17:54991395..54991453,- | |||
|coexpression_cluster_id=C7 | |||
|description=CAGE_peak_1_at_TRIM25_5end | |description=CAGE_peak_1_at_TRIM25_5end | ||
|id=chr17:54991395..54991453,- | |id=chr17:54991395..54991453,- | ||
|ontology_enrichment_celltype=CL:0000063!1.60e-22!578;CL:0000766!9.20e-18!76;CL:0000860!4.96e-16!45;CL:0002057!2.49e-15!42;CL:0000557!4.25e-15!71;CL:0002194!2.21e-14!63;CL:0000576!2.21e-14!63;CL:0000040!2.21e-14!63;CL:0000559!2.21e-14!63;CL:0000548!2.35e-14!679;CL:0000004!2.35e-14!679;CL:0000255!2.35e-14!679;CL:0000839!2.89e-14!70;CL:0000012!4.68e-14!682;CL:0000066!6.22e-14!254;CL:0000763!1.51e-13!112;CL:0000049!1.51e-13!112;CL:0002009!2.07e-13!65;CL:0000003!1.78e-11!722;CL:0002371!4.00e-11!591;CL:0000144!1.00e-08!625;CL:0000076!1.33e-08!62;CL:0002078!1.56e-08!44;CL:0000213!5.76e-08!57;CL:0000215!5.76e-08!57;CL:0000115!7.45e-07!35;CL:0000223!9.44e-07!59 | |ontology_enrichment_celltype=CL:0000063!1.60e-22!578;CL:0000766!9.20e-18!76;CL:0000860!4.96e-16!45;CL:0002057!2.49e-15!42;CL:0000557!4.25e-15!71;CL:0002194!2.21e-14!63;CL:0000576!2.21e-14!63;CL:0000040!2.21e-14!63;CL:0000559!2.21e-14!63;CL:0000548!2.35e-14!679;CL:0000004!2.35e-14!679;CL:0000255!2.35e-14!679;CL:0000839!2.89e-14!70;CL:0000012!4.68e-14!682;CL:0000066!6.22e-14!254;CL:0000763!1.51e-13!112;CL:0000049!1.51e-13!112;CL:0002009!2.07e-13!65;CL:0000003!1.78e-11!722;CL:0002371!4.00e-11!591;CL:0000144!1.00e-08!625;CL:0000076!1.33e-08!62;CL:0002078!1.56e-08!44;CL:0000213!5.76e-08!57;CL:0000215!5.76e-08!57;CL:0000115!7.45e-07!35;CL:0000223!9.44e-07!59 | ||
|ontology_enrichment_celltype_v019=CL:0000860;5.41e-18;33!CL:0002057;5.41e-18;33!CL:0000473;1.22e-14;39!CL:0000234;1.22e-14;39!CL:0000576;9.41e-11;48!CL:0000766;2.07e-09;69!CL:0000763;3.27e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,1.06e-17,72;CL:0000473,2.06e-15,48;CL:0000234,2.06e-15,48;CL:0000860,2.49e-15,42;CL:0002057,2.49e-15,42;CL:0000557,5.23e-15,67;CL:0002194,2.52e-14,59;CL:0000576,2.52e-14,59;CL:0000040,2.52e-14,59;CL:0000559,2.52e-14,59;CL:0000839,3.67e-14,66;CL:0000066,7.17e-14,253;CL:0002009,2.58e-13,61;CL:0000763,2.61e-13,108;CL:0000049,2.61e-13,108;CL:0002078,8.40e-09,45;CL:0000076,1.60e-08,63;CL:0000213,3.24e-08,58;CL:0000215,3.24e-08,58;CL:0000115,4.06e-07,36;CL:0000223,8.19e-07,58 | |||
|ontology_enrichment_development_v019=CL:0002057;8.86e-12;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!6.25e-18!112;UBERON:0002390!1.57e-16!102;UBERON:0003061!1.57e-16!102;UBERON:0002405!1.93e-15!115;UBERON:0000926!7.09e-15!448;UBERON:0004120!7.09e-15!448;UBERON:0006603!7.09e-15!448;UBERON:0001474!4.61e-14!86;UBERON:0002371!6.91e-14!80;UBERON:0004765!1.55e-12!101;UBERON:0001434!1.55e-12!101;UBERON:0003081!2.85e-12!216;UBERON:0004119!5.73e-07!169;UBERON:0000925!5.73e-07!169;UBERON:0006595!5.73e-07!169 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.00e-17,108;UBERON:0002390,2.45e-16,98;UBERON:0003061,2.45e-16,98;UBERON:0002405,1.70e-15,93;UBERON:0001474,6.90e-14,82;UBERON:0002371,9.91e-14,76;UBERON:0004765,6.06e-12,90;UBERON:0001434,6.89e-12,100;UBERON:0003081,1.74e-10,203;UBERON:0000926,4.43e-07,315;UBERON:0004120,4.43e-07,315;UBERON:0006603,4.43e-07,315 | |||
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| ||
|short_description=p1@TRIM25 | |short_description=p1@TRIM25 | ||
}} | }} |
Latest revision as of 08:18, 16 September 2015
Short description: | p1@TRIM25 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TRIM25_5end |
Coexpression cluster: | C7_CD14_Eosinophils_Neutrophils_Smooth_Basophils_Macrophage_Mast |
Association with transcript: | 0bp_to_ENST00000316881, NM_005082, uc002iut.2, uc010dcj.2_5end |
EntrezGene: | TRIM25 |
HGNC: | 12932 |
UniProt: | Q14258 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 1.06e-17 | 72 |
defensive cell | 2.06e-15 | 48 |
phagocyte | 2.06e-15 | 48 |
classical monocyte | 2.49e-15 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.49e-15 | 42 |
granulocyte monocyte progenitor cell | 5.23e-15 | 67 |
monopoietic cell | 2.52e-14 | 59 |
monocyte | 2.52e-14 | 59 |
monoblast | 2.52e-14 | 59 |
promonocyte | 2.52e-14 | 59 |
myeloid lineage restricted progenitor cell | 3.67e-14 | 66 |
epithelial cell | 7.17e-14 | 253 |
macrophage dendritic cell progenitor | 2.58e-13 | 61 |
myeloid cell | 2.61e-13 | 108 |
common myeloid progenitor | 2.61e-13 | 108 |
meso-epithelial cell | 8.40e-09 | 45 |
squamous epithelial cell | 1.60e-08 | 63 |
lining cell | 3.24e-08 | 58 |
barrier cell | 3.24e-08 | 58 |
endothelial cell | 4.06e-07 | 36 |
endodermal cell | 8.19e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 1.00e-17 | 108 |
hematopoietic system | 2.45e-16 | 98 |
blood island | 2.45e-16 | 98 |
immune system | 1.70e-15 | 93 |
bone element | 6.90e-14 | 82 |
bone marrow | 9.91e-14 | 76 |
skeletal element | 6.06e-12 | 90 |
skeletal system | 6.89e-12 | 100 |
lateral plate mesoderm | 1.74e-10 | 203 |
mesoderm | 4.43e-07 | 315 |
mesoderm-derived structure | 4.43e-07 | 315 |
presumptive mesoderm | 4.43e-07 | 315 |