FFCP PHASE1:Hg19::chr12:38531589..38531619,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:38531589..38531619,+ | |||
|coexpression_cluster_id=C1360 | |||
|description=CAGE_peak_at_chr12:38531589..38531619,+ | |description=CAGE_peak_at_chr12:38531589..38531619,+ | ||
|id=chr12:38531589..38531619,+ | |id=chr12:38531589..38531619,+ | ||
|ontology_enrichment_celltype=CL:0002057!2.11e-15!42;CL:0000860!4.17e-14!45;CL:0002009!1.65e-13!65;CL:0000839!3.08e-13!70;CL:0000557!4.06e-13!71;CL:0002194!1.12e-12!63;CL:0000576!1.12e-12!63;CL:0000040!1.12e-12!63;CL:0000559!1.12e-12!63;CL:0000766!1.90e-12!76;CL:0000763!2.61e-08!112;CL:0000049!2.61e-08!112 | |ontology_enrichment_celltype=CL:0002057!2.11e-15!42;CL:0000860!4.17e-14!45;CL:0002009!1.65e-13!65;CL:0000839!3.08e-13!70;CL:0000557!4.06e-13!71;CL:0002194!1.12e-12!63;CL:0000576!1.12e-12!63;CL:0000040!1.12e-12!63;CL:0000559!1.12e-12!63;CL:0000766!1.90e-12!76;CL:0000763!2.61e-08!112;CL:0000049!2.61e-08!112 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.53e-24;33!CL:0002057;2.53e-24;33!CL:0000473;6.83e-20;39!CL:0000234;6.83e-20;39!CL:0000576;5.36e-12;48!CL:0000766;5.12e-09;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,9.03e-21,48;CL:0000234,9.03e-21,48;CL:0000860,1.29e-20,42;CL:0002057,1.29e-20,42;CL:0000557,5.64e-19,67;CL:0002009,1.56e-18,61;CL:0000839,5.65e-18,66;CL:0000766,1.26e-17,72;CL:0002194,2.86e-17,59;CL:0000576,2.86e-17,59;CL:0000040,2.86e-17,59;CL:0000559,2.86e-17,59;CL:0000763,1.46e-11,108;CL:0000049,1.46e-11,108;CL:0002031,4.70e-07,120 | |||
|ontology_enrichment_development_v019=CL:0002057;2.64e-15;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.03e-11!80;UBERON:0001474!5.99e-11!86;UBERON:0002390!1.34e-08!102;UBERON:0003061!1.34e-08!102;UBERON:0002193!1.68e-08!112;UBERON:0004765!3.75e-08!101;UBERON:0001434!3.75e-08!101;UBERON:0002204!5.69e-08!167;UBERON:0002405!9.06e-08!115;UBERON:0003081!8.95e-07!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,7.19e-18,76;UBERON:0001474,4.81e-17,82;UBERON:0002405,7.28e-15,93;UBERON:0004765,5.76e-14,90;UBERON:0002193,4.57e-11,108;UBERON:0001434,6.43e-11,100;UBERON:0002390,7.74e-11,98;UBERON:0003061,7.74e-11,98;UBERON:0002204,2.56e-09,167;UBERON:0003081,2.81e-09,203 | |||
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| ||
|short_description=p@chr12:38531589..38531619,+ | |short_description=p@chr12:38531589..38531619,+ | ||
}} | }} |
Latest revision as of 08:17, 24 July 2015
Short description: | p@chr12:38531589..38531619, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:38531589..38531619, + |
Coexpression cluster: | C1360_skeletal_Monocytederived_Smooth_optic_Myoblast_acute_Mesenchymal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 9.03e-21 | 48 |
phagocyte | 9.03e-21 | 48 |
classical monocyte | 1.29e-20 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.29e-20 | 42 |
granulocyte monocyte progenitor cell | 5.64e-19 | 67 |
macrophage dendritic cell progenitor | 1.56e-18 | 61 |
myeloid lineage restricted progenitor cell | 5.65e-18 | 66 |
myeloid leukocyte | 1.26e-17 | 72 |
monopoietic cell | 2.86e-17 | 59 |
monocyte | 2.86e-17 | 59 |
monoblast | 2.86e-17 | 59 |
promonocyte | 2.86e-17 | 59 |
myeloid cell | 1.46e-11 | 108 |
common myeloid progenitor | 1.46e-11 | 108 |
hematopoietic lineage restricted progenitor cell | 4.70e-07 | 120 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 7.19e-18 | 76 |
bone element | 4.81e-17 | 82 |
immune system | 7.28e-15 | 93 |
skeletal element | 5.76e-14 | 90 |
hemolymphoid system | 4.57e-11 | 108 |
skeletal system | 6.43e-11 | 100 |
hematopoietic system | 7.74e-11 | 98 |
blood island | 7.74e-11 | 98 |
musculoskeletal system | 2.56e-09 | 167 |
lateral plate mesoderm | 2.81e-09 | 203 |