FFCP PHASE1:Hg19::chr12:32638897..32638919,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=121512 | |EntrezGene=121512 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19125 | |HGNC=19125 | ||
|TSSclassifier=strong | |||
|UniProt=B7Z493 | |UniProt=B7Z493 | ||
|association_with_transcript=0bp_to_ENST00000531134,uc001rlc.2_5end | |association_with_transcript=0bp_to_ENST00000531134,uc001rlc.2_5end | ||
|cluster_id=chr12:32638897..32638919,+ | |||
|coexpression_cluster_id=C26 | |||
|description=CAGE_peak_1_at_FGD4_5end | |description=CAGE_peak_1_at_FGD4_5end | ||
|id=chr12:32638897..32638919,+ | |id=chr12:32638897..32638919,+ | ||
|ontology_enrichment_celltype=CL:0000766!7.78e-47!76;CL:0002194!2.60e-43!63;CL:0000576!2.60e-43!63;CL:0000040!2.60e-43!63;CL:0000559!2.60e-43!63;CL:0002009!3.47e-41!65;CL:0000839!7.95e-40!70;CL:0002057!9.70e-40!42;CL:0000557!1.47e-36!71;CL:0000860!1.01e-35!45;CL:0000763!2.15e-34!112;CL:0000049!2.15e-34!112;CL:0000738!1.58e-31!140;CL:0000037!1.97e-27!172;CL:0000566!1.97e-27!172;CL:0002087!4.49e-27!119;CL:0002032!8.65e-25!165;CL:0000837!8.65e-25!165;CL:0000988!5.82e-24!182;CL:0002031!9.24e-24!124;CL:0002393!1.57e-09!9;CL:0002397!1.57e-09!9;CL:0000094!8.12e-09!8 | |ontology_enrichment_celltype=CL:0000766!7.78e-47!76;CL:0002194!2.60e-43!63;CL:0000576!2.60e-43!63;CL:0000040!2.60e-43!63;CL:0000559!2.60e-43!63;CL:0002009!3.47e-41!65;CL:0000839!7.95e-40!70;CL:0002057!9.70e-40!42;CL:0000557!1.47e-36!71;CL:0000860!1.01e-35!45;CL:0000763!2.15e-34!112;CL:0000049!2.15e-34!112;CL:0000738!1.58e-31!140;CL:0000037!1.97e-27!172;CL:0000566!1.97e-27!172;CL:0002087!4.49e-27!119;CL:0002032!8.65e-25!165;CL:0000837!8.65e-25!165;CL:0000988!5.82e-24!182;CL:0002031!9.24e-24!124;CL:0002393!1.57e-09!9;CL:0002397!1.57e-09!9;CL:0000094!8.12e-09!8 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.42e-33;33!CL:0002057;1.42e-33;33!CL:0000473;7.02e-33;39!CL:0000234;7.02e-33;39!CL:0000576;6.73e-29;48!CL:0000766;8.95e-23;69!CL:0000763;2.86e-10;100!CL:0000094;4.12e-10;8!CL:0002087;5.62e-09;104!CL:0000738;2.66e-08;136!CL:0002393;1.14e-07;6!CL:0002397;1.14e-07;6!CL:0000235;3.94e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,2.04e-55,72;CL:0000473,1.68e-52,48;CL:0000234,1.68e-52,48;CL:0002194,2.77e-52,59;CL:0000576,2.77e-52,59;CL:0000040,2.77e-52,59;CL:0000559,2.77e-52,59;CL:0002009,7.78e-50,61;CL:0000860,1.31e-46,42;CL:0002057,1.31e-46,42;CL:0000839,2.25e-44,66;CL:0000557,2.21e-43,67;CL:0000738,6.41e-33,136;CL:0000763,6.93e-33,108;CL:0000049,6.93e-33,108;CL:0002087,3.42e-30,115;CL:0000037,3.48e-25,168;CL:0002031,1.71e-24,120;CL:0000988,1.78e-22,177;CL:0002032,2.73e-22,161;CL:0000837,2.73e-22,161;CL:0002393,5.91e-11,9;CL:0002397,5.91e-11,9;CL:0000094,4.10e-10,8;CL:0000235,3.84e-07,6 | |||
|ontology_enrichment_development_v019=CL:0002057;2.42e-33;42!CL:0000049;3.70e-10;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.27e-61!115;UBERON:0002390!6.86e-38!102;UBERON:0003061!6.86e-38!102;UBERON:0002193!8.26e-34!112;UBERON:0002371!8.76e-31!80;UBERON:0001474!8.51e-28!86;UBERON:0001049!1.47e-22!57;UBERON:0005068!1.47e-22!57;UBERON:0006241!1.47e-22!57;UBERON:0007135!1.47e-22!57;UBERON:0002405!5.15e-22!115;UBERON:0004765!4.98e-21!101;UBERON:0001434!4.98e-21!101;UBERON:0002616!1.42e-17!59;UBERON:0003080!1.54e-17!42;UBERON:0002780!4.53e-17!41;UBERON:0001890!4.53e-17!41;UBERON:0006240!4.53e-17!41;UBERON:0003075!2.43e-14!86;UBERON:0007284!2.43e-14!86;UBERON:0000955!4.40e-14!69;UBERON:0006238!4.40e-14!69;UBERON:0001017!6.15e-14!82;UBERON:0005743!2.80e-13!86;UBERON:0002020!3.39e-13!34;UBERON:0003528!3.39e-13!34;UBERON:0001893!4.34e-13!34;UBERON:0002346!6.20e-13!90;UBERON:0002791!1.40e-12!33;UBERON:0003081!3.03e-12!216;UBERON:0001869!8.58e-12!32;UBERON:0000073!3.85e-11!94;UBERON:0001016!3.85e-11!94;UBERON:0002619!8.28e-10!22;UBERON:0003056!1.18e-09!61;UBERON:0000479!1.41e-09!787;UBERON:0001950!1.70e-08!20;UBERON:0000062!1.87e-08!511;UBERON:0000956!5.98e-08!25;UBERON:0000203!5.98e-08!25;UBERON:0000178!1.22e-07!15;UBERON:0000179!1.22e-07!15;UBERON:0000463!1.22e-07!15;UBERON:0002204!1.41e-07!167;UBERON:0002308!2.28e-07!9;UBERON:0000125!2.28e-07!9;UBERON:0002420!2.67e-07!9;UBERON:0007245!2.67e-07!9;UBERON:0010009!2.67e-07!9;UBERON:0010011!2.67e-07!9;UBERON:0000454!2.67e-07!9;UBERON:0002298!6.69e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0007023;6.65e-15;114!UBERON:0002780;4.01e-14;41!UBERON:0001890;4.01e-14;41!UBERON:0000073;2.59e-13;53!UBERON:0002616;2.59e-13;53!UBERON:0001893;9.25e-13;34!UBERON:0003528;2.28e-12;34!UBERON:0002020;2.28e-12;34!UBERON:0002791;5.68e-12;32!UBERON:0001869;8.50e-12;32!UBERON:0002619;1.49e-10;22!UBERON:0001950;4.85e-09;20!UBERON:0000178;5.03e-09;15!UBERON:0000179;5.03e-09;15!UBERON:0000463;5.03e-09;15!UBERON:0000956;1.04e-08;25!UBERON:0000203;1.04e-08;25!UBERON:0000125;2.00e-08;9!UBERON:0002308;2.00e-08;9!UBERON:0002420;2.48e-08;9!UBERON:0007245;2.48e-08;9!UBERON:0010009;2.48e-08;9!UBERON:0010011;2.48e-08;9!UBERON:0000454;2.48e-08;9!UBERON:0001017;8.87e-08;75!UBERON:0000955;1.34e-07;68!UBERON:0009663;7.68e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.37e-54,114;UBERON:0002390,7.49e-46,98;UBERON:0003061,7.49e-46,98;UBERON:0002193,2.03e-40,108;UBERON:0002371,5.68e-37,76;UBERON:0001474,1.14e-32,82;UBERON:0002405,3.92e-32,93;UBERON:0004765,7.29e-28,90;UBERON:0001049,1.63e-25,56;UBERON:0005068,1.63e-25,56;UBERON:0006241,1.63e-25,56;UBERON:0007135,1.63e-25,56;UBERON:0001434,5.19e-24,100;UBERON:0000073,2.60e-23,53;UBERON:0002616,2.60e-23,53;UBERON:0002780,2.52e-19,41;UBERON:0001890,2.52e-19,41;UBERON:0003080,2.52e-19,41;UBERON:0006240,2.52e-19,41;UBERON:0000955,1.39e-16,68;UBERON:0006238,1.39e-16,68;UBERON:0003075,2.93e-16,82;UBERON:0007284,2.93e-16,82;UBERON:0003081,3.37e-16,203;UBERON:0001017,3.52e-16,81;UBERON:0002346,8.37e-15,86;UBERON:0003528,8.74e-15,34;UBERON:0002020,8.74e-15,34;UBERON:0001893,1.16e-14,34;UBERON:0001016,7.14e-14,89;UBERON:0002791,2.44e-13,32;UBERON:0001869,3.79e-13,32;UBERON:0003056,3.30e-11,61;UBERON:0002619,1.63e-10,22;UBERON:0010371,2.49e-10,104;UBERON:0000178,5.04e-09,15;UBERON:0000179,5.04e-09,15;UBERON:0000463,5.04e-09,15;UBERON:0001950,5.32e-09,20;UBERON:0000479,8.66e-09,773;UBERON:0002204,1.12e-08,167;UBERON:0000956,1.13e-08,25;UBERON:0000203,1.13e-08,25;UBERON:0000125,2.07e-08,9;UBERON:0002308,2.07e-08,9;UBERON:0002420,2.50e-08,9;UBERON:0007245,2.50e-08,9;UBERON:0010009,2.50e-08,9;UBERON:0010011,2.50e-08,9;UBERON:0000454,2.50e-08,9;UBERON:0000923,2.64e-08,560;UBERON:0010316,2.64e-08,560;UBERON:0005291,2.64e-08,560;UBERON:0006598,2.64e-08,560;UBERON:0010317,2.64e-08,560;UBERON:0002532,2.64e-08,560;UBERON:0002050,5.75e-08,564;UBERON:0010314,1.03e-07,132;UBERON:0003076,2.20e-07,15;UBERON:0003057,2.20e-07,15;UBERON:0005423,3.08e-07,581;UBERON:0009663,7.84e-07,7 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0.436882744260345,0,0,0,1.34465029290355,0,0,0,0,0,0,0,0,0,0,0,0,22.8151280572364,32.6254988382631,24.3061313606239,0,0,0,0,0,3.22960483268332,53.7375546275921,33.2903782800435,30.1645110295034,24.1828712179118,36.9238779261637,34.2575504953468,55.2513307362346,44.9672372989683,36.6301932393602,133.879125257674,86.3452564845834,143.084343353538,71.3477132958933,49.4390163601164,65.7420599090267,253.732821022151,180.735711403471,150.323400119719,96.7565625248988,65.7703821639408,106.06948465808,226.502080354468,258.668795823331,214.177937142679,17.8119702100827,31.7147215618395,26.8521592835597,121.01725250812,58.4406781431874,99.651559839292,82.9120595347253,54.2342235157009,94.6943362914309,108.971910474006,151.362108390889,153.167795521388,128.020703505037,121.609659580005,120.973038458333,177.254579949169,128.401243379488,190.781271409434,128.540747427303,100.055088631142,128.047571789008,0,1.09227722252426,0.889509253863555,8.53460445133014,0.400395987036012,1.14950487990897,1.98313461835459,0.954053754535364,0,0,0,0,9.52864557068611,1.58030450865046,0.196709770113833,0,0.411202997999018,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.86708872891687,0,0,7.22760571573309,4.09557155694139,2.49861453104692,9.47109008176067,3.28451198768419,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,3.40545596294053,0,0,63.9358365499726,76.7912141489768,56.24121729948,3.33886874027479,4.0039643754609,1.11437250398869,0,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,301.777155928585,337.368829809043,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,4.91413608338813,1.18157981336281,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,55.8912603818392,113.960077122809,54.2503742353858,0,0,0,0,0.290633938513962,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.542621605391443,0,0,0,0,0,0,0,14.5948536769429,18.5835123829887,44.2751272914366,0,0,0,0.144781306667579,0,0,0,1.37921532141349,0,1.92514554419623,0,0,0,0.167516265334349,0,281.626641004141,209.413021442817,472.848100830516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,44.2483575902979,55.4385496103845,12.5938518208064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241718899183244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.877039506583738,0.784306353074702,0,0,0,14.837905677272,0,0,0,0,0,0,0,0,0,0,0,0.340906509664404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.92947049429925,0,0,0,0,0,0,0,0,0,0,0.670302275535787,0,13.4625635110794,0,0,0,0,45.6702848308952,33.6440371142645,21.6465931126182,28.8260448303925,32.0862573007231,54.4717581401883,43.7425464162873,19.8281294073568,0,0,0,0,0,0,0,0,1.7235483311913,0.211673582723883,0.324621940274555,0,0,1.88015874927628,0,0.169291777801603,0,0,4.25846237690326,12.3661924112075,0.307240764308458,0.447352215784832,0.500547425135725,0.781552381608161,0,0,0,0,0,0,24.7598822969501,0,0,0,0.95497793895076,0.296964680832639,0,12.9239194209619,18.4276935497772,0,0,0,3.58646378851925,0.828851746593443,0,0,0,0,0,0,0,4.14302303675121,23.948309234694,0,2.90799823828566,6.86483926397699,0,0,0,3.62499787717397,0,0,0,0,0,0,15.9433449446491,14.2303797577981,4.5774520895125,3.53853631779919,1.18219047581419,2.4132393686937,0,0,2.77020930613669,0,0,0,0,0.957003479195758,0.183195186803725,5.33034776018635,0,0.31396051279005,0,0,0,0,0,0,0,0,0,0,0.995261931078505,3.18447232212021,1.83309043480088,0,0,0,19.815933096319,0,7.96499115466153,0,0.19566461893209,0,1.18375320854817,1.20990716048664,0,23.3158478829121,0,0,0,0,0,0,0,0,0,0,0,4.71762004253481,0,0,0,0,3.006659511141,0.706049013532002,2.71176888936639,0,0,6.01452561580848,0.195551382734803,0,0.640358984218058,0,0,0,0,0,0,0,0,0,0,0,12.0084057741958,27.2441703995066,0,0,0,8.65775443943988,0.687481272035051,8.61447629492177,2.39614800598789,1.71690419254628,5.35611497860494,3.62790751428322,0,0,0,0,0,0,0,27.0378094535163,22.8821722267447,0,0,0,0,0,6.56095211906666,0,4.01909107225911,2.15063811353492,0,4.66147082265396,0,2.85878130549347,3.97255182219259,0,0,0,0,0,0,0,0,2.63794020620548,2.65013777824443,15.1261058943014,22.4795422962573,0,0,29.6869006938191,13.9911831538703,21.9546699334014,13.3964825889227,0,0,0,1.08803560673895,1.7548292581589,7.65863941908654,1.63936315354902,0,0.886068179966986,7.93170721862761,14.3969570312475,24.6565954146731,34.8317221825716,19.1877885088875,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.1023604874765,0.389720617678777,0.132864840313363,0.163565394255844,0,0,0,0,0.213383459388282,0,0,0,0,1.24415452006595,0,0,0,0,0,0,0,0,0,0,0,0,0,6.67983941003179,9.91876034279095,17.0808229191152,2.2562800066483,0,2.28218933131919,6.13607453401034,4.28308260777463,0,0,0,0,0,0,0,2.48194083552549,0,0.781514011233092,0,0,0,5.67315710794515,7.81078098613847,16.9483173130971,6.27816520919678,0,0,2.97726707033577,0,0,3.74991285114801,12.7787814443153,6.676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| ||
|short_description=p1@FGD4 | |short_description=p1@FGD4 | ||
}} | }} |
Latest revision as of 05:04, 18 September 2015
Short description: | p1@FGD4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_FGD4_5end |
Coexpression cluster: | C26_Eosinophils_Neutrophils_CD14_CD14CD16_Basophils_Monocytederived_Whole |
Association with transcript: | 0bp_to_ENST00000531134, uc001rlc.2_5end |
EntrezGene: | FGD4 |
HGNC: | 19125 |
UniProt: | B7Z493 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 2.04e-55 | 72 |
defensive cell | 1.68e-52 | 48 |
phagocyte | 1.68e-52 | 48 |
monopoietic cell | 2.77e-52 | 59 |
monocyte | 2.77e-52 | 59 |
monoblast | 2.77e-52 | 59 |
promonocyte | 2.77e-52 | 59 |
macrophage dendritic cell progenitor | 7.78e-50 | 61 |
classical monocyte | 1.31e-46 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.31e-46 | 42 |
myeloid lineage restricted progenitor cell | 2.25e-44 | 66 |
granulocyte monocyte progenitor cell | 2.21e-43 | 67 |
leukocyte | 6.41e-33 | 136 |
myeloid cell | 6.93e-33 | 108 |
common myeloid progenitor | 6.93e-33 | 108 |
nongranular leukocyte | 3.42e-30 | 115 |
hematopoietic stem cell | 3.48e-25 | 168 |
hematopoietic lineage restricted progenitor cell | 1.71e-24 | 120 |
hematopoietic cell | 1.78e-22 | 177 |
hematopoietic oligopotent progenitor cell | 2.73e-22 | 161 |
hematopoietic multipotent progenitor cell | 2.73e-22 | 161 |
intermediate monocyte | 5.91e-11 | 9 |
CD14-positive, CD16-positive monocyte | 5.91e-11 | 9 |
granulocyte | 4.10e-10 | 8 |
macrophage | 3.84e-07 | 6 |