FFCP PHASE1:Hg19::chr12:279773..279812,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:279773..279812,+ | |||
|coexpression_cluster_id=C368 | |||
|description=CAGE_peak_at_chr12:279773..279812,+ | |description=CAGE_peak_at_chr12:279773..279812,+ | ||
|id=chr12:279773..279812,+ | |id=chr12:279773..279812,+ | ||
|ontology_enrichment_celltype=CL:0000708!4.10e-08!3;CL:0000064!9.20e-07!3;CL:0005012!9.20e-07!3;CL:0000067!9.20e-07!3;CL:0002304!9.20e-07!3 | |ontology_enrichment_celltype=CL:0000708!4.10e-08!3;CL:0000064!9.20e-07!3;CL:0005012!9.20e-07!3;CL:0000067!9.20e-07!3;CL:0002304!9.20e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0002575;1.29e-26;2!CL:0002549;1.12e-25;2!CL:0000708;6.51e-18;3!CL:0000669;8.06e-14;4!CL:0002262;1.99e-07;2!CL:1000398;1.99e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002575,1.29e-26,2;CL:0002549,1.44e-25,2;CL:0000708,6.52e-18,3;CL:0000669,8.06e-14,4;CL:0002262,1.75e-07,2;CL:1000398,1.75e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0010227;8.05e-14;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0005629;1.12e-25;2!UBERON:0005358;1.12e-25;2!UBERON:0001886;1.12e-25;2!UBERON:0004086;1.12e-25;2!UBERON:0005282;1.12e-25;2!UBERON:0005281;1.12e-25;2!UBERON:0005284;5.45e-23;5!UBERON:0003210;6.51e-18;3!UBERON:0002079;8.05e-14;1!UBERON:0002108;7.70e-11;4!UBERON:0006876;8.54e-11;11!UBERON:0002081;1.50e-07;2!UBERON:0000341;1.99e-07;2!UBERON:0001281;1.99e-07;2!UBERON:0003497;1.99e-07;2!UBERON:0003909;1.99e-07;2!UBERON:0003835;1.99e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005629,1.44e-25,2;UBERON:0005358,1.44e-25,2;UBERON:0001886,1.44e-25,2;UBERON:0004086,1.44e-25,2;UBERON:0005282,1.44e-25,2;UBERON:0005281,1.44e-25,2;UBERON:0005284,6.34e-23,5;UBERON:0003210,6.52e-18,3;UBERON:0002079,8.58e-14,1;UBERON:0002108,6.47e-11,4;UBERON:0006876,9.13e-11,11;UBERON:0002081,1.54e-07,2;UBERON:0010227,1.54e-07,2;UBERON:0001281,1.75e-07,2;UBERON:0003497,1.75e-07,2;UBERON:0003909,1.75e-07,2;UBERON:0003835,1.75e-07,2;UBERON:0000341,2.12e-07,2 | |||
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| ||
|short_description=p@chr12:279773..279812,+ | |short_description=p@chr12:279773..279812,+ | ||
}} | }} |
Latest revision as of 07:54, 24 July 2015
Short description: | p@chr12:279773..279812, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:279773..279812, + |
Coexpression cluster: | C368_Pericytes_Fibroblast_Nucleus_Anulus_Meningeal_Mesenchymal_Smooth |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
central nervous system pericyte | 1.29e-26 | 2 |
fibroblast of choroid plexus | 1.44e-25 | 2 |
leptomeningeal cell | 6.52e-18 | 3 |
pericyte cell | 8.06e-14 | 4 |
endothelial cell of sinusoid | 1.75e-07 | 2 |
endothelial cell of hepatic sinusoid | 1.75e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
vascular plexus | 1.44e-25 | 2 |
ventricle of nervous system | 1.44e-25 | 2 |
choroid plexus | 1.44e-25 | 2 |
brain ventricle | 1.44e-25 | 2 |
ventricular system of brain | 1.44e-25 | 2 |
ventricular system of central nervous system | 1.44e-25 | 2 |
brain vasculature | 6.34e-23 | 5 |
blood-cerebrospinal fluid barrier | 6.52e-18 | 3 |
left cardiac atrium | 8.58e-14 | 1 |
small intestine | 6.47e-11 | 4 |
vasculature of organ | 9.13e-11 | 11 |
cardiac atrium | 1.54e-07 | 2 |
future cardiac atrium | 1.54e-07 | 2 |
hepatic sinusoid | 1.75e-07 | 2 |
abdomen blood vessel | 1.75e-07 | 2 |
sinusoid | 1.75e-07 | 2 |
abdominal segment blood vessel | 1.75e-07 | 2 |
throat | 2.12e-07 | 2 |