FFCP PHASE1:Hg19::chr17:4843987..4843999,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=26001 | |EntrezGene=26001 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24544 | |HGNC=24544 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=205bp_to_uc002fzu.2,uc002fzv.2_5end | |association_with_transcript=205bp_to_uc002fzu.2,uc002fzv.2_5end | ||
|cluster_id=chr17:4843987..4843999,+ | |||
|description=CAGE_peak_9_at_RNF167_5end | |description=CAGE_peak_9_at_RNF167_5end | ||
|id=chr17:4843987..4843999,+ | |id=chr17:4843987..4843999,+ | ||
|ontology_enrichment_celltype=CL:0000066!2.36e-33!254;CL:0000220!2.41e-20!246;CL:0002321!2.42e-20!248;CL:0000076!1.61e-11!62;CL:0002076!7.08e-11!43;CL:0000223!9.40e-11!59;CL:0000222!3.41e-09!119;CL:0000548!5.82e-07!679;CL:0000004!5.82e-07!679;CL:0000255!5.82e-07!679 | |ontology_enrichment_celltype=CL:0000066!2.36e-33!254;CL:0000220!2.41e-20!246;CL:0002321!2.42e-20!248;CL:0000076!1.61e-11!62;CL:0002076!7.08e-11!43;CL:0000223!9.40e-11!59;CL:0000222!3.41e-09!119;CL:0000548!5.82e-07!679;CL:0000004!5.82e-07!679;CL:0000255!5.82e-07!679 | ||
|ontology_enrichment_celltype_v019=CL:0002076;4.04e-09;42!CL:0002159;8.41e-07;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,2.07e-36,253;CL:0002321,8.64e-20,250;CL:0000076,9.86e-13,63;CL:0002076,1.15e-12,42;CL:0000223,5.18e-11,58;CL:0000222,2.16e-08,121;CL:0002159,6.89e-07,14 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!4.28e-09!106;DOID:0050687!1.61e-08!143;DOID:14566!3.49e-08!239;DOID:162!1.26e-07!235 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,2.41e-08,106;DOID:0050687,5.36e-08,143;DOID:14566,5.65e-07,239 | |||
|ontology_enrichment_uberon=UBERON:0003104!3.66e-09!238;UBERON:0009142!3.66e-09!238;UBERON:0004119!1.13e-07!169;UBERON:0000925!1.13e-07!169;UBERON:0006595!1.13e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;1.29e-07;9!UBERON:0001557;1.29e-07;9!UBERON:0000072;4.79e-07;37 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,4.52e-09,160;UBERON:0000925,4.52e-09,160;UBERON:0006595,4.52e-09,160;UBERON:0006554,1.16e-08,47;UBERON:0001008,3.03e-08,48;UBERON:0001737,1.46e-07,9;UBERON:0008947,6.85e-07,38;UBERON:0003258,6.85e-07,38 | |||
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| ||
|short_description=p9@RNF167 | |short_description=p9@RNF167 | ||
}} | }} |
Latest revision as of 02:00, 16 September 2015
Short description: | p9@RNF167 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_RNF167_5end |
Coexpression cluster: | NA |
Association with transcript: | 205bp_to_uc002fzu.2, uc002fzv.2_5end |
EntrezGene: | RNF167 |
HGNC: | 24544 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 2.07e-36 | 253 |
embryonic cell | 8.64e-20 | 250 |
squamous epithelial cell | 9.86e-13 | 63 |
endo-epithelial cell | 1.15e-12 | 42 |
endodermal cell | 5.18e-11 | 58 |
mesodermal cell | 2.16e-08 | 121 |
general ecto-epithelial cell | 6.89e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 4.52e-09 | 160 |
endoderm | 4.52e-09 | 160 |
presumptive endoderm | 4.52e-09 | 160 |
urinary system structure | 1.16e-08 | 47 |
renal system | 3.03e-08 | 48 |
larynx | 1.46e-07 | 9 |
respiratory primordium | 6.85e-07 | 38 |
endoderm of foregut | 6.85e-07 | 38 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 2.41e-08 | 106 |
cell type cancer | 5.36e-08 | 143 |
disease of cellular proliferation | 5.65e-07 | 239 |