FFCP PHASE1:Hg19::chr12:24715376..24715432,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6660 | |EntrezGene=6660 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=11201 | |HGNC=11201 | ||
|TSSclassifier=strong | |||
|UniProt=P35711 | |UniProt=P35711 | ||
|association_with_transcript=0bp_to_ENST00000429944,ENST00000446891,NM_152989,uc001rfx.2,uc001rfy.2_5end | |association_with_transcript=0bp_to_ENST00000429944,ENST00000446891,NM_152989,uc001rfx.2,uc001rfy.2_5end | ||
|cluster_id=chr12:24715376..24715432,- | |||
|coexpression_cluster_id=C3268 | |||
|description=CAGE_peak_1_at_SOX5_5end | |description=CAGE_peak_1_at_SOX5_5end | ||
|id=chr12:24715376..24715432,- | |id=chr12:24715376..24715432,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;3.23e-09;82 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!8.81e-36!115;UBERON:0005743!1.41e-30!86;UBERON:0001017!2.27e-30!82;UBERON:0001049!8.58e-29!57;UBERON:0005068!8.58e-29!57;UBERON:0006241!8.58e-29!57;UBERON:0007135!8.58e-29!57;UBERON:0000073!1.01e-28!94;UBERON:0001016!1.01e-28!94;UBERON:0002616!2.29e-27!59;UBERON:0000955!3.27e-26!69;UBERON:0006238!3.27e-26!69;UBERON:0003080!4.08e-24!42;UBERON:0002346!8.95e-24!90;UBERON:0002780!1.55e-23!41;UBERON:0001890!1.55e-23!41;UBERON:0006240!1.55e-23!41;UBERON:0003075!2.80e-23!86;UBERON:0007284!2.80e-23!86;UBERON:0003056!5.22e-20!61;UBERON:0000033!6.56e-20!123;UBERON:0000153!7.55e-20!129;UBERON:0007811!7.55e-20!129;UBERON:0002020!8.35e-20!34;UBERON:0003528!8.35e-20!34;UBERON:0001893!9.14e-20!34;UBERON:0002791!3.17e-19!33;UBERON:0000924!5.42e-19!173;UBERON:0006601!5.42e-19!173;UBERON:0001869!7.61e-19!32;UBERON:0004121!2.23e-18!169;UBERON:0000956!6.81e-16!25;UBERON:0000203!6.81e-16!25;UBERON:0002619!3.09e-14!22;UBERON:0001950!6.13e-13!20;UBERON:0000481!1.89e-12!347;UBERON:0000477!2.44e-11!286;UBERON:0000922!3.33e-10!612;UBERON:0002050!3.35e-09!605;UBERON:0005423!3.35e-09!605;UBERON:0000923!7.24e-09!604;UBERON:0005291!7.24e-09!604;UBERON:0006598!7.24e-09!604;UBERON:0002532!7.24e-09!604;UBERON:0004111!1.69e-08!241;UBERON:0000483!9.88e-08!309;UBERON:0000475!1.02e-07!365;UBERON:0000119!1.75e-07!312;UBERON:0000468!2.68e-07!659;UBERON:0000025!5.60e-07!194 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;2.73e-21;41!UBERON:0001890;2.73e-21;41!UBERON:0002791;4.56e-21;32!UBERON:0001869;4.61e-21;32!UBERON:0001893;7.05e-21;34!UBERON:0003528;7.13e-21;34!UBERON:0002020;7.13e-21;34!UBERON:0000956;1.64e-19;25!UBERON:0000203;1.64e-19;25!UBERON:0000073;3.38e-18;53!UBERON:0002616;3.38e-18;53!UBERON:0002619;2.08e-17;22!UBERON:0001950;8.86e-16;20!UBERON:0000955;6.13e-14;68!UBERON:0001017;1.17e-13;75!UBERON:0001016;7.79e-12;83!UBERON:0007023;3.19e-11;114!UBERON:0000922;2.95e-08;49!UBERON:0011216;1.89e-07;132 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,9.88e-43,114;UBERON:0001049,7.99e-33,56;UBERON:0005068,7.99e-33,56;UBERON:0006241,7.99e-33,56;UBERON:0007135,7.99e-33,56;UBERON:0001017,3.81e-32,81;UBERON:0000073,1.04e-30,53;UBERON:0002616,1.04e-30,53;UBERON:0001016,4.53e-30,89;UBERON:0002780,3.40e-29,41;UBERON:0001890,3.40e-29,41;UBERON:0003080,3.40e-29,41;UBERON:0006240,3.40e-29,41;UBERON:0000955,5.41e-29,68;UBERON:0006238,5.41e-29,68;UBERON:0003075,5.13e-27,82;UBERON:0007284,5.13e-27,82;UBERON:0002346,1.05e-26,86;UBERON:0003528,1.70e-24,34;UBERON:0002020,1.70e-24,34;UBERON:0001893,1.90e-24,34;UBERON:0001869,2.74e-23,32;UBERON:0002791,3.17e-23,32;UBERON:0003056,5.19e-23,61;UBERON:0011216,2.40e-22,223;UBERON:0004121,8.97e-21,171;UBERON:0000924,8.97e-21,171;UBERON:0006601,8.97e-21,171;UBERON:0010371,6.43e-20,104;UBERON:0000956,1.42e-19,25;UBERON:0000203,1.42e-19,25;UBERON:0010314,4.73e-19,132;UBERON:0002619,1.72e-17,22;UBERON:0001950,7.39e-16,20;UBERON:0004111,2.80e-09,240;UBERON:0000922,2.23e-08,592;UBERON:0000483,2.73e-08,306;UBERON:0002050,3.47e-08,564;UBERON:0000923,3.49e-08,560;UBERON:0010316,3.49e-08,560;UBERON:0005291,3.49e-08,560;UBERON:0006598,3.49e-08,560;UBERON:0010317,3.49e-08,560;UBERON:0002532,3.49e-08,560;UBERON:0000119,6.73e-08,309;UBERON:0000025,1.56e-07,192;UBERON:0005423,1.62e-07,581 | |||
|phase1_expression=1.09007027562334,0.856402095563933,2.39622486963151,0,0.446961094427288,0,0,0.631719873426831,1.82829939739887,0.245733936501509,0,0,0,1.8564952944007,1.32558950291166,0,0,0,0,0.61560529038394,0.816002764977012,0.313454721478088,11.1632034981112,7.39121895393575,7.28147309649856,0,0,0,0,0,0.154816123316076,0,0,0,2.78881922089086,10.2361847390943,0,0.553995408531877,0.601633342410425,0.217010870715852,0.447830948479849,0.32389366601898,1.03030227053675,0,0,0,0.232429036905685,0,0,0,0,0.47296445977717,0,0,0,0.188242339542605,0,0,0.306083892370903,0,0,0,0,0,0.870627715885752,3.97169657283798,2.4912889959823,0,0,0,2.42159801053347,1.10483290796269,0.632924774881769,0,0,0,0,0,0,0,0,0,0,9.28435639145624,0.889509253863555,3.84057200309856,2.00197993518006,1.72425731986345,0,1.90810750907073,4.55370375287559,8.80855784056408,4.20500550937752,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.87613732627923,0,0.255725123687061,0.722878304769133,0.50133791063589,1.88300474649071,3.1811437882044,11.6792368872633,10.3042950708834,4.43458794925128,3.24988707064566,6.41797469938792,0,0,0.324547393654683,0.174129737299267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.803697554556718,1.34717623575702,0.112611480483322,0,0,0,0,0,0,0,0,1.05927344650575,0.286836620748814,0.354668382198357,1.12135520028461,0,0.49333509683432,1.55605517699883,0.269421344139376,0.163461903113459,0.454072282934794,1.15235184896,0.468642863667593,0.312160076830321,0,0.149448680551801,0,0,0,3.67477508258808,2.57952066354713,3.09977343527296,1.18800285728205,2.22540236350701,0.910161361938026,3.59309070908119,1.0100166837244,0.750711119231785,1.38532057742091,0.438977620880838,0.612975591598039,1.35214253015937,0,0.358779271377724,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.365921118388786,0.795178609928912,0.69716365721711,1.86589899027667,0.504641701751257,0,0,0,1.38134921352481,0,0,0.118306800039844,0.168584690078102,0.241011029883482,0.220587945464788,0,0.237270619111097,0.134831308160164,0,0,0,0,2.8810180793198,0,19.0132552232746,5.89696330006576,17.7236972004421,15.8926715789274,6.76436411987125,1.71567810298526,0,0,0.100528972411631,0.0925884451585296,0,0,1.44331342025273,2.08674728955138,1.87853910777315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25248486685276,2.41291998310242,2.29193055334967,2.34434894420094,0,3.18765227380303,2.10240140490742,6.85983438313388,0.112131084345361,0,0.1466765716419,1.42198887333556,0,1.690605505112,4.5209479819428,4.16029747645464,0,0,0,4.00338382242813,1.62786481617433,1.64648067356154,0,3.19852753868291,0,0.904318131178758,0,0.399891964728228,0,0,0,0,0,0,0.289562613335158,1.64381058040307,0,0,0.197030760201927,0,0.128343036279748,9.90969034467607,3.90419561572865,3.86644406388848,3.01529277601828,2.55175500661265,0,0,0,3.55805325985506,0.500170521059677,0.542530047399471,0,0,0,0.35142424497814,0.300946099727719,4.5481500811197,1.03473071292505,0,0.553107505625109,0,0.587403472388222,0.686286847621712,0.620304078368662,0.215714200818617,0.533637789017222,0,0,0,0.248107807818777,0,0,1.02511319404561,0,0.965123526861645,0,0.462629081407967,0.177561725313127,0.328508624055237,0.519254429183621,0.348631135379878,6.16383192917273,0,0,2.41110341145674,2.36718518408732,4.19598127870157,0,0.0770153371044148,0,0,0.105551628892876,0,0,0.431831832204279,1.54227252690289,0.812839312631559,0,0,0,0,0,0,0.256450125116389,0.984043937099117,0.650756789328606,17.6200129917605,1.73981983154852,2.22775649785588,0,0,1.6068392984416,0.870036464629098,2.46477787383431,1.68854042198743,0.137836572484531,6.55263493696469,2.46528379654188,0.681813019328807,0.178064071293475,0,0,0.127612712494584,0.10115778085555,0,1.25924938732256,1.3940745403212,0.308033580176089,0,0,0.55597265731176,0.429374660225974,2.60510858551767,0.949138274156178,4.95638504201945,1.02359116524534,3.85145089230528,0.95460974377781,0,2.87795932133304,6.86342574340137,4.12343408209902,0,1.58510321173008,0,0,1.46228093778771,0,2.8664981395677,2.2624869112594,0,0,0.66343897524122,0.438450885253763,0.578775534266688,0.655894752046633,0.405820753925408,0.92947049429925,0,1.43411352204052,0.88424136911809,0.35667105148125,4.96665489698837,1.89996871767898,0.329294892959902,0,1.04980416073495,0,0,0,14.2157139172937,0,0,0,0,0,0,0.569647187174163,0,0,0.648473311192717,0,0,0,0.962479855263359,0,0,0,0,1.11598390910176,0,0,0,0,0,0,0,0,0,0.1605880751037,0,0,0,0,0,0.166849141711909,0,0,0,0,0,0,0,18.8995551260743,0,0,0,0,0,0,4.97073823883149,12.8009168933567,2.22617410045812,3.62568523298871,0,11.9548792950642,6.63081397274754,0.251932747854276,9.20418142519393,0,0,0,0,0,6.21453455512682,0,0,7.75466196876175,5.65885398787293,9.98068990005971,0.260427761085233,0,8.69999490521752,0,7.37335585849022,0,0,0.583209226766509,0.347249989866585,2.65722415744152,10.9742759149121,3.05163472634166,6.63475559587348,3.54657142744257,4.38770794307945,0.871507708151921,0.557694977114413,17.2368579048505,0,0,0.0897576444097721,0.108647371922008,0.31900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| ||
|short_description=p1@SOX5 | |short_description=p1@SOX5 | ||
}} | }} |
Latest revision as of 21:13, 17 September 2015
Short description: | p1@SOX5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SOX5_5end |
Coexpression cluster: | C3268_parietal_temporal_pineal_occipital_gastrointestinal_mature_extraskeletal |
Association with transcript: | 0bp_to_ENST00000429944, ENST00000446891, NM_152989, uc001rfx.2, uc001rfy.2_5end |
EntrezGene: | SOX5 |
HGNC: | 11201 |
UniProt: | P35711 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data