FFCP PHASE1:Mm9::chrX:99200207..99200218,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=100042480 | |EntrezGene=100042480 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-164bp_to_ENSMUST00000144753_5end | |association_with_transcript=-164bp_to_ENSMUST00000144753_5end | ||
|cluster_id=chrX:99200207..99200218,+ | |||
|description=CAGE_peak_8_at_Nhsl2_5end | |description=CAGE_peak_8_at_Nhsl2_5end | ||
|id=chrX:99200207..99200218,+ | |id=chrX:99200207..99200218,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0002610,1.33e-11,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000955!4.07e-10!50;UBERON:0006238!4.07e-10!50;UBERON:0002616!1.88e-09!49;UBERON:0000033!1.84e-08!63;UBERON:0001049!1.24e-07!52;UBERON:0005068!1.24e-07!52;UBERON:0006241!1.24e-07!52;UBERON:0007135!1.24e-07!52;UBERON:0000025!2.21e-07!114 | |ontology_enrichment_uberon=UBERON:0000955!4.07e-10!50;UBERON:0006238!4.07e-10!50;UBERON:0002616!1.88e-09!49;UBERON:0000033!1.84e-08!63;UBERON:0001049!1.24e-07!52;UBERON:0005068!1.24e-07!52;UBERON:0006241!1.24e-07!52;UBERON:0007135!1.24e-07!52;UBERON:0000025!2.21e-07!114 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,4.20e-13,18;UBERON:0000948,4.20e-13,18;UBERON:0005498,4.20e-13,18;UBERON:0004140,4.20e-13,18;UBERON:0009881,4.20e-13,18;UBERON:0004141,4.20e-13,18;UBERON:0003084,4.20e-13,18;UBERON:0007005,4.20e-13,18;UBERON:0004139,4.20e-13,18;UBERON:0004291,4.20e-13,18;UBERON:0004684,1.33e-11,3;UBERON:0002275,1.33e-11,3;UBERON:0004535,5.19e-10,23;UBERON:0001009,5.19e-10,23;UBERON:0004872,2.31e-08,33;UBERON:0010314,5.58e-07,92 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404632921719196,0,0,0,0,0,0,0,0,0,0.103689612308478,0,0,0,0.441737081903227,0,0,0,1.10115880999389,1.78762273319263,1.0752457327937,0,0.365950574409639,0.52091337055676,0.558365998002762,1.12552522006336,1.22238598221448,0,0.142371680799103,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0.148442139064825,0,0,0,0,0,0,0.494389935468748,0,0,0,0,0,1.86391761218122,0.878342391034642,0.83778682725382,0.255457055208591,0,0,0,0.599162557619291,1.37250180845588,0.251308704225729,0.869121600961382,2.04572365864264,1.45451631191692,2.27137768294861,0.305518091550949,0,0,0,0.130120442962704,0,0,0,0.136072998302656,0,0.0937017245597288,0.258703370739016,0,0,0.351902248327898,0.43839146485515,0,0,0.205782136407943,0.199034266818493,0,0,0,1.65700618028402,1.64168241986767,0.900310307305074,1.65721314909647,3.14822770795846,2.00547246753592,1.86027155800326,1.87791380979733,1.40118410840603,0.493679549740441,0,0.0810688095458557,0,0,0,0.841159794256509,0,0,0,0,0.232236671860439,0,0.201683524623343,0,0,0.474529061544512,0.329397909448022,0,0.397912944082302,0,0,0,0,0,0,0,0.203651327845314,0.387904974335251,0,0.126473074248515,0.295220295959204,0,0.123397163921801,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0.162964976442026,0,0.469380496577004,0.167506257441816,0.476087281772027,0.780534591431195,0.315270288212382,1.10732344824387,0.797273843287435,0.81931657357869,0.518054945597687,0.578596234326046,0,0,0,0,0.963303539926752,0.468846746368813,0,0,0,0,0,0.238968797952552,0,0,0,0,0,2.24924921495265,0.141940085208269,0.35613120733451,0.488660878060728,0,0,0,0.302323556964751,0,0,0,0,0,0,0,0,0,0,0.540183282093931,0.258717367565509,0.214337035031592,0.532020700926821,0.713475270408282,0.493647061806363,0,0,0,0,0,0,0.0603129249281559,0,0.164140899745061,0,0.556275906031529,0,1.44470807574256,0.925972636848558,0,0,0,0,0,0,0,0.316335993581135,0,0.108005340821801,0.209088296014469,0.218362563746178,0.269728692769641,0.165306911450672,0,0,0,0,0,0,0,0,0.168956125490778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343706364687375,0.685082519770642,3.0215755895588,0,2.2516060161211,0.906284817968409,0.51776031175182,0.103787347584177,0.399024873401031,0.170733605754134,0.486213434136588,0.628839487883947,0.367687016900028,0.222246727801615,0.206035057238894,0,0.252697211763798,0,0.565879024158229,0.0936415074698824,0.192075457214608,0.287177344778066,0,0.347652977834566,0.38581844092741,0.412085900803307,0.294397840268795,0.342869252385415,0.354951612318675,0.476872379894642,0,0.376437521661322,0.0846146078916765,0.365855945745545,0.526139422875686,0.271608227691724,0.561142271657738,0.237270036248348,0.29551344712669,0,0.154936841185966,0.192906610981141,0.249810577937946,0,0.214871054048298,0.382576664137687,0,0.231867835620421 | |phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404632921719196,0,0,0,0,0,0,0,0,0,0.103689612308478,0,0,0,0.441737081903227,0,0,0,1.10115880999389,1.78762273319263,1.0752457327937,0,0.365950574409639,0.52091337055676,0.558365998002762,1.12552522006336,1.22238598221448,0,0.142371680799103,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0.148442139064825,0,0,0,0,0,0,0.494389935468748,0,0,0,0,0,1.86391761218122,0.878342391034642,0.83778682725382,0.255457055208591,0,0,0,0.599162557619291,1.37250180845588,0.251308704225729,0.869121600961382,2.04572365864264,1.45451631191692,2.27137768294861,0.305518091550949,0,0,0,0.130120442962704,0,0,0,0.136072998302656,0,0.0937017245597288,0.258703370739016,0,0,0.351902248327898,0.43839146485515,0,0,0.205782136407943,0.199034266818493,0,0,0,1.65700618028402,1.64168241986767,0.900310307305074,1.65721314909647,3.14822770795846,2.00547246753592,1.86027155800326,1.87791380979733,1.40118410840603,0.493679549740441,0,0.0810688095458557,0,0,0,0.841159794256509,0,0,0,0,0.232236671860439,0,0.201683524623343,0,0,0.474529061544512,0.329397909448022,0,0.397912944082302,0,0,0,0,0,0,0,0.203651327845314,0.387904974335251,0,0.126473074248515,0.295220295959204,0,0.123397163921801,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0.162964976442026,0,0.469380496577004,0.167506257441816,0.476087281772027,0.780534591431195,0.315270288212382,1.10732344824387,0.797273843287435,0.81931657357869,0.518054945597687,0.578596234326046,0,0,0,0,0.963303539926752,0.468846746368813,0,0,0,0,0,0.238968797952552,0,0,0,0,0,2.24924921495265,0.141940085208269,0.35613120733451,0.488660878060728,0,0,0,0.302323556964751,0,0,0,0,0,0,0,0,0,0,0.540183282093931,0.258717367565509,0.214337035031592,0.532020700926821,0.713475270408282,0.493647061806363,0,0,0,0,0,0,0.0603129249281559,0,0.164140899745061,0,0.556275906031529,0,1.44470807574256,0.925972636848558,0,0,0,0,0,0,0,0.316335993581135,0,0.108005340821801,0.209088296014469,0.218362563746178,0.269728692769641,0.165306911450672,0,0,0,0,0,0,0,0,0.168956125490778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343706364687375,0.685082519770642,3.0215755895588,0,2.2516060161211,0.906284817968409,0.51776031175182,0.103787347584177,0.399024873401031,0.170733605754134,0.486213434136588,0.628839487883947,0.367687016900028,0.222246727801615,0.206035057238894,0,0.252697211763798,0,0.565879024158229,0.0936415074698824,0.192075457214608,0.287177344778066,0,0.347652977834566,0.38581844092741,0.412085900803307,0.294397840268795,0.342869252385415,0.354951612318675,0.476872379894642,0,0.376437521661322,0.0846146078916765,0.365855945745545,0.526139422875686,0.271608227691724,0.561142271657738,0.237270036248348,0.29551344712669,0,0.154936841185966,0.192906610981141,0.249810577937946,0,0.214871054048298,0.382576664137687,0,0.231867835620421 | ||
|short_description=p8@Nhsl2 | |short_description=p8@Nhsl2 | ||
}} | }} |
Latest revision as of 01:00, 2 October 2015
Short description: | p8@Nhsl2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_Nhsl2_5end |
Coexpression cluster: | NA |
Association with transcript: | -164bp_to_ENSMUST00000144753_5end |
EntrezGene: | Nhsl2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
raphe nuclei neuron | 1.33e-11 | 3 |
Ontology term | p-value | n |
---|---|---|
primary circulatory organ | 4.20e-13 | 18 |
heart | 4.20e-13 | 18 |
primitive heart tube | 4.20e-13 | 18 |
primary heart field | 4.20e-13 | 18 |
anterior lateral plate mesoderm | 4.20e-13 | 18 |
heart tube | 4.20e-13 | 18 |
heart primordium | 4.20e-13 | 18 |
cardiac mesoderm | 4.20e-13 | 18 |
cardiogenic plate | 4.20e-13 | 18 |
heart rudiment | 4.20e-13 | 18 |
raphe nuclei | 1.33e-11 | 3 |
reticular formation | 1.33e-11 | 3 |
cardiovascular system | 5.19e-10 | 23 |
circulatory system | 5.19e-10 | 23 |
splanchnic layer of lateral plate mesoderm | 2.31e-08 | 33 |
structure with developmental contribution from neural crest | 5.58e-07 | 92 |