FFCP PHASE1:Hg19::chr10:85931560..85931577,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr10:85931560..85931577,-
|short_description=p2@ENST00000514797,p2@uc001kct.2
|description=CAGE_peak_2_at_ENST00000514797_5end,CAGE_peak_2_at_uc001kct.2_5end
|...") |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=254bp_to_ENST00000514797,uc001kct.2_5end | |||
|cluster_id=chr10:85931560..85931577,- | |||
|coexpression_cluster_id=C36 | |||
|description=CAGE_peak_2_at_ENST00000514797_5end,CAGE_peak_2_at_uc001kct.2_5end | |||
|id=chr10:85931560..85931577,- | |||
|ontology_enrichment_celltype=CL:0000945!8.45e-12!24;CL:0000826!8.45e-12!24;CL:0002621!1.79e-09!3;CL:0002076!3.53e-09!43;CL:0002368!4.54e-08!13;CL:0000244!4.80e-08!4;CL:0000731!4.80e-08!4;CL:0002159!1.09e-07!13;CL:0000785!2.07e-07!2;CL:0000955!2.07e-07!2;CL:0000818!2.07e-07!2;CL:0000954!2.07e-07!2;CL:0000816!2.07e-07!2;CL:0000575!3.01e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0000313;1.86e-12;1!CL:0000946;3.44e-12;1!CL:0000786;3.44e-12;1!CL:0000244;6.20e-12;4!CL:0000731;6.20e-12;4!CL:0000945;1.16e-11;24!CL:0000159;7.40e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000313,1.57e-12,1;CL:0000946,2.75e-12,1;CL:0000786,2.75e-12,1;CL:0000980,2.75e-12,1;CL:0000244,7.52e-12,4;CL:0000731,7.52e-12,4;CL:0000945,1.13e-11,24;CL:0000826,1.13e-11,24;CL:0000838,1.94e-07,52;CL:0000542,2.73e-07,53;CL:0000051,2.73e-07,53;CL:0000159,6.80e-07,2;CL:0000785,9.02e-07,2;CL:0000955,9.02e-07,2;CL:0000818,9.02e-07,2;CL:0000954,9.02e-07,2;CL:0000816,9.02e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0060058!9.09e-08!10 | |||
|ontology_enrichment_disease_v019=DOID:2152;1.86e-12;1!DOID:4468;7.40e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:2152,1.57e-12,1;DOID:4468,7.20e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0001949!1.79e-09!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0004911;1.86e-12;1!UBERON:0000365;9.91e-10;5!UBERON:0005910;2.97e-08;6!UBERON:0004909;7.40e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004911,1.57e-12,1;UBERON:0000365,1.16e-09,5;UBERON:0005910,3.37e-08,6;UBERON:0004909,6.80e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.32906122652669,5.17233713534658,7.00525953691745,0,0,0,0,0,0.739508020333575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.728590576585084,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0.272746120590835,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0.201057944823262,0.277765335475589,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0.567100388969546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00253235151642,0,0,0,0,0,0,0,0,0.73886140225013,0,0,0.431831832204279,0,0,0.501689773854853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.4875642382488,0.384380134730212,2.55225424989168,0.30347334256665,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,2.15252686335615,0,0.886860307073351,1.37834040124176,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222886768554957,0,0,0,0,0,0,0,0,0,0,0,0,0,3.07712013652674,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227586896570999,0,0,0,0,0,0,0,0,0,0,0,0,1.95193241990045,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.61172493054636,0,0,0,0,0,0,0,0,0,0,0,0.364909578431332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293977192243133,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.36084591982081,0,0,0,0,0,0,0,0,0,0,0,0,0,0.76205998859206,0,0.136203406111576,0,0,0,0,0,0,0.670869375198532,0,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.988058159489721,0.974340787047167,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0.163565394255844,0,0,0,0,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159633859057151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336283722218824,0,0,0.177404740325278,1.72850981333669,0,0.135939465953663,0,0,0,0.078493092850514,0,0,0,1.51149313853035,3.34426181520935,0,0,0,0,0,1.65772931330429,0.51215543128185,0,0,0,0,0,0,0,0,2.9082412267426,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0.297046400327086,0,0,0,0,6.09641051142066,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217716747896961,0,0.134704106029175,0.143444410785353,0,0,0,0,0,0,0.122241444182866,0,0,0,0.961705476909699 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.32906122652669,5.17233713534658,7.00525953691745,0,0,0,0,0,0.739508020333575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.728590576585084,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0.272746120590835,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0.201057944823262,0.277765335475589,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0.567100388969546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00253235151642,0,0,0,0,0,0,0,0,0.73886140225013,0,0,0.431831832204279,0,0,0.501689773854853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.4875642382488,0.384380134730212,2.55225424989168,0.30347334256665,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,2.15252686335615,0,0.886860307073351,1.37834040124176,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222886768554957,0,0,0,0,0,0,0,0,0,0,0,0,0,3.07712013652674,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227586896570999,0,0,0,0,0,0,0,0,0,0,0,0,1.95193241990045,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.61172493054636,0,0,0,0,0,0,0,0,0,0,0,0.364909578431332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293977192243133,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.36084591982081,0,0,0,0,0,0,0,0,0,0,0,0,0,0.76205998859206,0,0.136203406111576,0,0,0,0,0,0,0.670869375198532,0,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.988058159489721,0.974340787047167,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0.163565394255844,0,0,0,0,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159633859057151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336283722218824,0,0,0.177404740325278,1.72850981333669,0,0.135939465953663,0,0,0,0.078493092850514,0,0,0,1.51149313853035,3.34426181520935,0,0,0,0,0,1.65772931330429,0.51215543128185,0,0,0,0,0,0,0,0,2.9082412267426,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0.297046400327086,0,0,0,0,6.09641051142066,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217716747896961,0,0.134704106029175,0.143444410785353,0,0,0,0,0,0,0.122241444182866,0,0,0,0.961705476909699 | ||
|short_description=p2@ENST00000514797,p2@uc001kct.2 | |||
}} | }} |
Latest revision as of 16:14, 23 July 2015
Short description: | p2@ENST00000514797, p2@uc001kct.2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ENST00000514797_5end, CAGE_peak_2_at_uc001kct.2_5end |
Coexpression cluster: | C36_B_b_splenic_plasma_xeroderma_adrenal_Burkitt |
Association with transcript: | 254bp_to_ENST00000514797, uc001kct.2_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
serous secreting cell | 1.57e-12 | 1 |
antibody secreting cell | 2.75e-12 | 1 |
plasma cell | 2.75e-12 | 1 |
plasmablast | 2.75e-12 | 1 |
transitional epithelial cell | 7.52e-12 | 4 |
urothelial cell | 7.52e-12 | 4 |
lymphocyte of B lineage | 1.13e-11 | 24 |
pro-B cell | 1.13e-11 | 24 |
lymphoid lineage restricted progenitor cell | 1.94e-07 | 52 |
lymphocyte | 2.73e-07 | 53 |
common lymphoid progenitor | 2.73e-07 | 53 |
seromucus secreting cell | 6.80e-07 | 2 |
mature B cell | 9.02e-07 | 2 |
pre-B-II cell | 9.02e-07 | 2 |
transitional stage B cell | 9.02e-07 | 2 |
small pre-B-II cell | 9.02e-07 | 2 |
immature B cell | 9.02e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
epithelium of female gonad | 1.57e-12 | 1 |
urothelium | 1.16e-09 | 5 |
transitional epithelium | 3.37e-08 | 6 |
epithelium of gonad | 6.80e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
ovary epithelial cancer | 1.57e-12 | 1 |
clear cell adenocarcinoma | 7.20e-07 | 2 |