FFCP PHASE1:Hg19::chr12:21679835..21679863,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=80763 | |EntrezGene=80763 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28139 | |HGNC=28139 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-114bp_to_ENST00000535033_5end | |association_with_transcript=-114bp_to_ENST00000535033_5end | ||
|cluster_id=chr12:21679835..21679863,+ | |||
|description=CAGE_peak_9_at_C12orf39_5end | |description=CAGE_peak_9_at_C12orf39_5end | ||
|id=chr12:21679835..21679863,+ | |id=chr12:21679835..21679863,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000123;8.24e-17;2!CL:0000242;8.24e-17;2!CL:0000312;2.94e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,1.14e-16,2;CL:0000312,3.34e-07,5 | |||
|ontology_enrichment_development_v019=UBERON:0005425;4.87e-09;1!UBERON:0007123;1.95e-07;5 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.65e-13!115;UBERON:0002298!7.61e-09!8;UBERON:0000073!3.11e-08!94;UBERON:0001016!3.11e-08!94;UBERON:0002346!4.30e-08!90;UBERON:0005743!6.05e-08!86;UBERON:0003075!6.16e-08!86;UBERON:0007284!6.16e-08!86;UBERON:0001049!6.32e-08!57;UBERON:0005068!6.32e-08!57;UBERON:0006241!6.32e-08!57;UBERON:0007135!6.32e-08!57;UBERON:0003076!1.42e-07!15;UBERON:0003057!1.42e-07!15;UBERON:0000489!3.12e-07!32;UBERON:0004732!4.79e-07!13;UBERON:0000988!5.74e-07!3;UBERON:0001017!5.87e-07!82;UBERON:0000924!7.72e-07!173;UBERON:0006601!7.72e-07!173;UBERON:0000153!9.15e-07!129;UBERON:0007811!9.15e-07!129;UBERON:0001896!9.82e-07!3;UBERON:0005290!9.82e-07!3;UBERON:0010096!9.82e-07!3 | |ontology_enrichment_uberon=UBERON:0007023!5.65e-13!115;UBERON:0002298!7.61e-09!8;UBERON:0000073!3.11e-08!94;UBERON:0001016!3.11e-08!94;UBERON:0002346!4.30e-08!90;UBERON:0005743!6.05e-08!86;UBERON:0003075!6.16e-08!86;UBERON:0007284!6.16e-08!86;UBERON:0001049!6.32e-08!57;UBERON:0005068!6.32e-08!57;UBERON:0006241!6.32e-08!57;UBERON:0007135!6.32e-08!57;UBERON:0003076!1.42e-07!15;UBERON:0003057!1.42e-07!15;UBERON:0000489!3.12e-07!32;UBERON:0004732!4.79e-07!13;UBERON:0000988!5.74e-07!3;UBERON:0001017!5.87e-07!82;UBERON:0000924!7.72e-07!173;UBERON:0006601!7.72e-07!173;UBERON:0000153!9.15e-07!129;UBERON:0007811!9.15e-07!129;UBERON:0001896!9.82e-07!3;UBERON:0005290!9.82e-07!3;UBERON:0010096!9.82e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0001301;2.88e-09;1!UBERON:0000941;4.87e-09;1!UBERON:0001785;4.87e-09;1!UBERON:0002464;4.87e-09;1!UBERON:0004904;4.87e-09;1!UBERON:0001021;4.87e-09;1!UBERON:0002046;1.95e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001301,3.83e-09,1;UBERON:0000941,4.50e-09,1;UBERON:0001785,4.50e-09,1;UBERON:0002464,4.50e-09,1;UBERON:0004904,4.50e-09,1;UBERON:0001021,4.50e-09,1;UBERON:0003902,4.50e-09,1;UBERON:0005425,4.50e-09,1;UBERON:0002046,1.77e-07,5;UBERON:0004117,1.77e-07,5;UBERON:0007689,1.77e-07,5;UBERON:0007123,1.77e-07,5;UBERON:0003091,1.77e-07,5 | |||
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| ||
|short_description=p9@C12orf39 | |short_description=p9@C12orf39 | ||
}} | }} |
Latest revision as of 19:45, 17 September 2015
Short description: | p9@C12orf39 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_C12orf39_5end |
Coexpression cluster: | NA |
Association with transcript: | -114bp_to_ENST00000535033_5end |
EntrezGene: | C12orf39 |
HGNC: | 28139 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 1.14e-16 | 2 |
keratinocyte | 3.34e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
epididymis | 3.83e-09 | 1 |
cranial nerve II | 4.50e-09 | 1 |
cranial nerve | 4.50e-09 | 1 |
nerve trunk | 4.50e-09 | 1 |
nerve connecting eye with brain | 4.50e-09 | 1 |
nerve | 4.50e-09 | 1 |
retinal neural layer | 4.50e-09 | 1 |
presumptive neural retina | 4.50e-09 | 1 |
thyroid gland | 1.77e-07 | 5 |
pharyngeal pouch | 1.77e-07 | 5 |
thyroid diverticulum | 1.77e-07 | 5 |
pharyngeal pouch 2 | 1.77e-07 | 5 |
thyroid primordium | 1.77e-07 | 5 |