FFCP PHASE1:Hg19::chr12:19389797..19389804,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54477 | |EntrezGene=54477 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30036 | |HGNC=30036 | ||
|TSSclassifier=strong | |||
|UniProt=B4DJX4 | |UniProt=B4DJX4 | ||
|association_with_transcript=-53bp_to_ENST00000536974,uc010sih.1_5end | |association_with_transcript=-53bp_to_ENST00000536974,uc010sih.1_5end | ||
|cluster_id=chr12:19389797..19389804,+ | |||
|coexpression_cluster_id=C3264 | |||
|description=CAGE_peak_11_at_PLEKHA5_5end | |description=CAGE_peak_11_at_PLEKHA5_5end | ||
|id=chr12:19389797..19389804,+ | |id=chr12:19389797..19389804,+ | ||
|ontology_enrichment_celltype=CL:0000990!2.18e-13!8;CL:0000148!9.04e-12!10;CL:0000541!9.04e-12!10;CL:0000451!8.39e-11!10;CL:0000147!3.55e-08!14;CL:0000453!8.19e-07!5 | |ontology_enrichment_celltype=CL:0000990!2.18e-13!8;CL:0000148!9.04e-12!10;CL:0000541!9.04e-12!10;CL:0000451!8.39e-11!10;CL:0000147!3.55e-08!14;CL:0000453!8.19e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0000148;4.41e-35;10!CL:0000990;4.57e-26;8!CL:0000147;4.13e-25;14!CL:0000451;2.11e-21;10!CL:0002567;9.52e-20;3!CL:0000710;1.30e-17;20!CL:0002566;1.92e-15;1!CL:0000075;4.66e-13;27!CL:0000453;1.34e-12;5!CL:0000840;1.18e-10;5!CL:0002077;1.79e-09;34 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,5.28e-35,10;CL:0000541,5.28e-35,10;CL:0000990,4.58e-26,8;CL:0000147,4.69e-25,14;CL:0000451,2.12e-21,10;CL:0002567,2.04e-19,3;CL:0000710,1.42e-17,20;CL:0002566,1.16e-15,1;CL:0000075,4.97e-13,27;CL:0000453,1.42e-12,5;CL:0000840,1.12e-10,5;CL:0001029,1.12e-10,5;CL:0002077,2.39e-10,34;CL:0000333,3.56e-08,41 | |||
|ontology_enrichment_development_v019=UBERON:0010122;2.23e-08;2 | |||
|ontology_enrichment_disease=DOID:1909!5.66e-08!2 | |ontology_enrichment_disease=DOID:1909!5.66e-08!2 | ||
|ontology_enrichment_disease_v019=DOID:1909;4.54e-29;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,2.56e-29,2 | |||
|ontology_enrichment_uberon=UBERON:0001869!8.84e-29!32;UBERON:0001049!1.12e-28!57;UBERON:0005068!1.12e-28!57;UBERON:0006241!1.12e-28!57;UBERON:0007135!1.12e-28!57;UBERON:0002780!7.05e-27!41;UBERON:0001890!7.05e-27!41;UBERON:0006240!7.05e-27!41;UBERON:0001893!7.54e-27!34;UBERON:0002020!1.16e-26!34;UBERON:0003528!1.16e-26!34;UBERON:0002619!2.63e-26!22;UBERON:0003080!4.01e-26!42;UBERON:0002616!3.22e-25!59;UBERON:0002791!1.07e-24!33;UBERON:0000956!7.72e-23!25;UBERON:0000203!7.72e-23!25;UBERON:0000955!3.24e-22!69;UBERON:0006238!3.24e-22!69;UBERON:0003075!7.46e-22!86;UBERON:0007284!7.46e-22!86;UBERON:0001950!1.22e-21!20;UBERON:0005743!1.51e-21!86;UBERON:0001017!4.80e-21!82;UBERON:0002346!1.46e-20!90;UBERON:0000073!7.50e-19!94;UBERON:0001016!7.50e-19!94;UBERON:0000200!1.67e-18!6;UBERON:0003056!2.37e-18!61;UBERON:0007023!2.91e-17!115;UBERON:0000033!2.40e-15!123;UBERON:0000153!2.73e-14!129;UBERON:0007811!2.73e-14!129;UBERON:0004121!7.19e-12!169;UBERON:0000924!2.05e-11!173;UBERON:0006601!2.05e-11!173;UBERON:0002771!2.47e-10!3;UBERON:0001871!1.55e-09!7;UBERON:0000025!6.24e-08!194;UBERON:0000369!1.11e-07!4;UBERON:0002435!1.11e-07!4;UBERON:0000204!1.11e-07!4;UBERON:0010082!1.11e-07!4;UBERON:0001870!2.15e-07!2;UBERON:0001954!4.02e-07!2;UBERON:0003022!4.02e-07!2;UBERON:0002421!4.02e-07!2;UBERON:0002600!4.02e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0001873;2.23e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001873,1.86e-08,2;UBERON:0010122,1.86e-08,2 | |||
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| ||
|short_description=p11@PLEKHA5 | |short_description=p11@PLEKHA5 | ||
}} | }} |
Latest revision as of 17:58, 17 September 2015
Short description: | p11@PLEKHA5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_PLEKHA5_5end |
Coexpression cluster: | C3264_migratory_melanoma_Dendritic_Melanocyte_mesenchymal_Saos2_Fibroblast |
Association with transcript: | -53bp_to_ENST00000536974, uc010sih.1_5end |
EntrezGene: | PLEKHA5 |
HGNC: | 30036 |
UniProt: | B4DJX4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 5.28e-35 | 10 |
melanoblast | 5.28e-35 | 10 |
conventional dendritic cell | 4.58e-26 | 8 |
pigment cell | 4.69e-25 | 14 |
dendritic cell | 2.12e-21 | 10 |
light melanocyte | 2.04e-19 | 3 |
neurecto-epithelial cell | 1.42e-17 | 20 |
dark melanocyte | 1.16e-15 | 1 |
columnar/cuboidal epithelial cell | 4.97e-13 | 27 |
Langerhans cell | 1.42e-12 | 5 |
immature conventional dendritic cell | 1.12e-10 | 5 |
common dendritic progenitor | 1.12e-10 | 5 |
ecto-epithelial cell | 2.39e-10 | 34 |
migratory neural crest cell | 3.56e-08 | 41 |
Ontology term | p-value | n |
---|---|---|
caudate nucleus | 1.86e-08 | 2 |
future caudate nucleus | 1.86e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
melanoma | 2.56e-29 | 2 |